RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 F8VRH5 84 aa10.23□□□□□ -0.77
RAB3IP-216ENST00000552199 SIVA1O15304 175 aa10.23□□□□□ -0.77
RAB3IP-216ENST00000552199 PLNP26678 52 aa10.23□□□□□ -0.77
RAB3IP-216ENST00000552199 ZC2HC1BQ5TFG8 222 aa10.23□□□□□ -0.77
RAB3IP-216ENST00000552199 GTSCR1Q86UQ5 136 aa10.23□□□□□ -0.77
RAB3IP-216ENST00000552199 BAALCQ8WXS3 180 aa10.23□□□□□ -0.77
RAB3IP-216ENST00000552199 CHTOPQ9Y3Y2 248 aaKnown RBP10.23□□□□□ -0.77
RAB3IP-216ENST00000552199 IGKV2D-26A0A0A0MRZ7 120 aa10.22□□□□□ -0.77
RAB3IP-216ENST00000552199 SAP30O75446 220 aa10.22□□□□□ -0.77
RAB3IP-216ENST00000552199 RIPPLY3P57055 190 aa10.22□□□□□ -0.77
RAB3IP-216ENST00000552199 C11orf72Q8NBR9 251 aa10.22□□□□□ -0.77
RAB3IP-216ENST00000552199 A8MWV9 139 aa10.21□□□□□ -0.77
RAB3IP-216ENST00000552199 CMC4P56277 68 aaPredicted RBP10.21□□□□□ -0.77
RAB3IP-216ENST00000552199 NSUN5P1Q3KNT7 163 aa10.21□□□□□ -0.77
RAB3IP-216ENST00000552199 DEFB104AQ8WTQ1 72 aa10.21□□□□□ -0.77
RAB3IP-216ENST00000552199 EDA2RQ9HAV5 297 aa10.21□□□□□ -0.77
RAB3IP-216ENST00000552199 XCL2Q9UBD3 114 aa10.21□□□□□ -0.77
RAB3IP-216ENST00000552199 TP53TG1Q9Y2A0 90 aa10.21□□□□□ -0.77
RAB3IP-216ENST00000552199 IGIPA6NJ69 53 aa10.21□□□□□ -0.78
RAB3IP-216ENST00000552199 UFSP1Q6NVU6 142 aa10.21□□□□□ -0.78
RAB3IP-216ENST00000552199 SPXQ9BT56 116 aa10.21□□□□□ -0.78
RAB3IP-216ENST00000552199 TMEM208Q9BTX3 173 aa10.21□□□□□ -0.78
RAB3IP-216ENST00000552199 PRSS29PA6NIE9 313 aa10.2□□□□□ -0.78
RAB3IP-216ENST00000552199 IGLV1-51P01701 117 aa10.2□□□□□ -0.78
RAB3IP-216ENST00000552199 TMEM97Q5BJF2 176 aa10.2□□□□□ -0.78
RAB3IP-216ENST00000552199 HIVEP2P31629 2446 aa10.2□□□□□ -0.78
RAB3IP-216ENST00000552199 RHOHQ15669 191 aa10.19□□□□□ -0.78
RAB3IP-216ENST00000552199 C1orf158Q8N1D5 194 aa10.19□□□□□ -0.78
RAB3IP-216ENST00000552199 TMEM141Q96I45 108 aa10.19□□□□□ -0.78
RAB3IP-216ENST00000552199 IGHV3-73A0A0B4J1V6 119 aa10.19□□□□□ -0.78
RAB3IP-216ENST00000552199 TSHBP01222 138 aa10.19□□□□□ -0.78
RAB3IP-216ENST00000552199 RPL39P62891 51 aaKnown RBP10.19□□□□□ -0.78
RAB3IP-216ENST00000552199 BEAN1Q3B7T3 259 aa10.19□□□□□ -0.78
RAB3IP-216ENST00000552199 SETD2Q9BYW2 2564 aaPredicted RBP10.18□□□□□ -0.78
RAB3IP-216ENST00000552199 NACAE9PAV3 2078 aa10.18□□□□□ -0.78
RAB3IP-216ENST00000552199 BAHCC1Q9P281 2608 aa10.18□□□□□ -0.78
RAB3IP-216ENST00000552199 I3L3M4 83 aa10.18□□□□□ -0.78
RAB3IP-216ENST00000552199 KRTAP10-3P60369 221 aa10.18□□□□□ -0.78
RAB3IP-216ENST00000552199 GAGE1Q13065 139 aa10.18□□□□□ -0.78
RAB3IP-216ENST00000552199 CFAP126Q5VTH2 177 aa10.18□□□□□ -0.78
RAB3IP-216ENST00000552199 TIMM17AQ99595 171 aa10.18□□□□□ -0.78
RAB3IP-216ENST00000552199 AZU1P20160 251 aa10.17□□□□□ -0.78
RAB3IP-216ENST00000552199 ORAOV1Q8WV07 137 aa10.17□□□□□ -0.78
RAB3IP-216ENST00000552199 FAM110AQ9BQ89 295 aa10.17□□□□□ -0.78
RAB3IP-216ENST00000552199 TTTY13Q9BZ97 58 aa10.17□□□□□ -0.78
RAB3IP-216ENST00000552199 COX11Q9Y6N1 276 aa10.17□□□□□ -0.78
RAB3IP-216ENST00000552199 SETXQ7Z333 2677 aaKnown RBP10.17□□□□□ -0.78
RAB3IP-216ENST00000552199 P0DMU3 169 aa10.17□□□□□ -0.78
RAB3IP-216ENST00000552199 FAM231AP0DMU4 169 aa10.17□□□□□ -0.78
RAB3IP-216ENST00000552199 FAM231CP0DMU5 169 aa10.17□□□□□ -0.78
RAB3IP-216ENST00000552199 HSD52Q0P140 79 aa10.17□□□□□ -0.78
RAB3IP-216ENST00000552199 Q6ZVH6 145 aa10.17□□□□□ -0.78
RAB3IP-216ENST00000552199 NDUFA11Q86Y39 141 aa10.17□□□□□ -0.78
RAB3IP-216ENST00000552199 MRPL16Q9NX20 251 aaKnown RBP10.17□□□□□ -0.78
RAB3IP-216ENST00000552199 PMVKQ15126 192 aa10.16□□□□□ -0.78
RAB3IP-216ENST00000552199 Q6ZSN1 163 aa10.16□□□□□ -0.78
RAB3IP-216ENST00000552199 HIGD1BQ9P298 99 aa10.16□□□□□ -0.78
RAB3IP-216ENST00000552199 IGHV3OR16-12A0A075B7B8 117 aa10.15□□□□□ -0.78
RAB3IP-216ENST00000552199 RHODO00212 210 aa10.15□□□□□ -0.78
RAB3IP-216ENST00000552199 TAX1BP3O14907 124 aa10.15□□□□□ -0.78
RAB3IP-216ENST00000552199 RS1O15537 224 aa10.15□□□□□ -0.78
RAB3IP-216ENST00000552199 SEC11AP67812 179 aa10.15□□□□□ -0.78
RAB3IP-216ENST00000552199 CST9LQ9H4G1 147 aa10.15□□□□□ -0.78
RAB3IP-216ENST00000552199 C19orf73Q9NVV2 129 aa10.15□□□□□ -0.78
RAB3IP-216ENST00000552199 OTOGQ6ZRI0 2925 aa10.15□□□□□ -0.78
RAB3IP-216ENST00000552199 C20orf203Q8NBC4 194 aa10.15□□□□□ -0.79
RAB3IP-216ENST00000552199 IL17DQ8TAD2 202 aa10.15□□□□□ -0.79
RAB3IP-216ENST00000552199 TNFRSF18Q9Y5U5 241 aa10.15□□□□□ -0.79
RAB3IP-216ENST00000552199 INAFM1C9JVW0 142 aa10.14□□□□□ -0.79
RAB3IP-216ENST00000552199 MAPKAPK5-AS1Q8N8E1 139 aa10.14□□□□□ -0.79
RAB3IP-216ENST00000552199 IGLV4-69A0A075B6H9 119 aa10.13□□□□□ -0.79
RAB3IP-216ENST00000552199 TRBV25-1A0A075B6N4 114 aa10.13□□□□□ -0.79
RAB3IP-216ENST00000552199 TRAV8-6A0A0B4J262 113 aa10.13□□□□□ -0.79
RAB3IP-216ENST00000552199 IGHV3-53P01767 116 aa10.13□□□□□ -0.79
RAB3IP-216ENST00000552199 GIG44P09565 113 aaPredicted RBP10.13□□□□□ -0.79
RAB3IP-216ENST00000552199 PAPPA-AS1Q5QFB9 102 aa10.13□□□□□ -0.79
RAB3IP-216ENST00000552199 WFDC10AQ9H1F0 79 aa10.13□□□□□ -0.79
RAB3IP-216ENST00000552199 RNASE8Q8TDE3 154 aaKnown RBP10.13□□□□□ -0.79
RAB3IP-216ENST00000552199 C11orf86A6NJI1 115 aa10.12□□□□□ -0.79
RAB3IP-216ENST00000552199 NPSP0C0P6 89 aa10.12□□□□□ -0.79
RAB3IP-216ENST00000552199 DNAJC30Q96LL9 226 aa10.12□□□□□ -0.79
RAB3IP-216ENST00000552199 CHAC1Q9BUX1 264 aa10.12□□□□□ -0.79
RAB3IP-216ENST00000552199 Q9UF83 564 aa10.12□□□□□ -0.79
RAB3IP-216ENST00000552199 E9PLD3 99 aa10.11□□□□□ -0.79
RAB3IP-216ENST00000552199 PF4P02776 101 aa10.11□□□□□ -0.79
RAB3IP-216ENST00000552199 LINC00482Q8N8I6 264 aa10.11□□□□□ -0.79
RAB3IP-216ENST00000552199 OR11H2Q8NH07 326 aa10.11□□□□□ -0.79
RAB3IP-216ENST00000552199 TMEM263Q8WUH6 116 aaKnown RBP10.11□□□□□ -0.79
RAB3IP-216ENST00000552199 RPL35AP18077 110 aaKnown RBP10.11□□□□□ -0.79
RAB3IP-216ENST00000552199 TRGV1A0A0A0MS02 117 aa10.1□□□□□ -0.79
RAB3IP-216ENST00000552199 A6NDN8 102 aa10.1□□□□□ -0.79
RAB3IP-216ENST00000552199 EMP1P54849 157 aa10.1□□□□□ -0.79
RAB3IP-216ENST00000552199 OPRPNQ99935 248 aaPredicted RBP10.1□□□□□ -0.79
RAB3IP-216ENST00000552199 NIPBLQ6KC79 2804 aaeCLIP10.1□□□□□ -0.79
RAB3IP-216ENST00000552199 OR4C5Q8NGB2 326 aa10.09□□□□□ -0.79
RAB3IP-216ENST00000552199 PRADC1Q9BSG0 188 aa10.09□□□□□ -0.79
RAB3IP-216ENST00000552199 MYMXA0A1B0GTQ4 84 aa10.09□□□□□ -0.79
RAB3IP-216ENST00000552199 C1QTNF4Q9BXJ3 329 aa10.09□□□□□ -0.79
RAB3IP-216ENST00000552199 PYGO1Q9Y3Y4 419 aa10.09□□□□□ -0.79
RAB3IP-216ENST00000552199 IGLV4-3A0A075B6K6 122 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms