RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 UBE2DNLQ8IWF7 75 aa3.2□□□□□ -1.9
SCAF11-214ENST00000550893 CYB561D1Q8N8Q1 229 aa3.2□□□□□ -1.9
SCAF11-214ENST00000550893 SLC25A29Q8N8R3 303 aa3.2□□□□□ -1.9
SCAF11-214ENST00000550893 ASB13Q8WXK3 278 aa3.2□□□□□ -1.9
SCAF11-214ENST00000550893 PTH2Q96A98 100 aa3.2□□□□□ -1.9
SCAF11-214ENST00000550893 DERL1Q9BUN8 251 aa3.2□□□□□ -1.9
SCAF11-214ENST00000550893 PARLQ9H300 379 aa3.2□□□□□ -1.9
SCAF11-214ENST00000550893 PRO0255Q9UI72 69 aa3.2□□□□□ -1.9
SCAF11-214ENST00000550893 EPDR1Q9UM22 224 aa3.2□□□□□ -1.9
SCAF11-214ENST00000550893 TRAV21A0A0B4J279 112 aa3.19□□□□□ -1.9
SCAF11-214ENST00000550893 MAP1LC3B2A6NCE7 125 aa3.19□□□□□ -1.9
SCAF11-214ENST00000550893 HMSDA8MTL9 139 aa3.19□□□□□ -1.9
SCAF11-214ENST00000550893 A8MU10 97 aa3.19□□□□□ -1.9
SCAF11-214ENST00000550893 KRBOX1C9JBD0 128 aa3.19□□□□□ -1.9
SCAF11-214ENST00000550893 M0R2P5 195 aa3.19□□□□□ -1.9
SCAF11-214ENST00000550893 PEX7O00628 323 aa3.19□□□□□ -1.9
SCAF11-214ENST00000550893 SH2D1AO60880 128 aa3.19□□□□□ -1.9
SCAF11-214ENST00000550893 CXorf1O96002 111 aa3.19□□□□□ -1.9
SCAF11-214ENST00000550893 PFN1P07737 140 aaKnown RBP3.19□□□□□ -1.9
SCAF11-214ENST00000550893 TAS2R45P59539 299 aa3.19□□□□□ -1.9
SCAF11-214ENST00000550893 KRTAP12-2P59991 146 aa3.19□□□□□ -1.9
SCAF11-214ENST00000550893 KRTAP10-1P60331 282 aa3.19□□□□□ -1.9
SCAF11-214ENST00000550893 KRTAP10-4P60372 401 aaPredicted RBP3.19□□□□□ -1.9
SCAF11-214ENST00000550893 UBE2G2P60604 165 aa3.19□□□□□ -1.9
SCAF11-214ENST00000550893 RPL19P84098 196 aaKnown RBP3.19□□□□□ -1.9
SCAF11-214ENST00000550893 ZNF674Q2M3X9 581 aa3.19□□□□□ -1.9
SCAF11-214ENST00000550893 LGALSLQ3ZCW2 172 aaPredicted RBP3.19□□□□□ -1.9
SCAF11-214ENST00000550893 C14orf178Q8N769 122 aaPredicted RBP3.19□□□□□ -1.9
SCAF11-214ENST00000550893 STOML3Q8TAV4 291 aa3.19□□□□□ -1.9
SCAF11-214ENST00000550893 SCGB1C1Q8TD33 95 aa3.19□□□□□ -1.9
SCAF11-214ENST00000550893 MBD3L1Q8WWY6 194 aa3.19□□□□□ -1.9
SCAF11-214ENST00000550893 ATG101Q9BSB4 218 aa3.19□□□□□ -1.9
SCAF11-214ENST00000550893 MAP1LC3BQ9GZQ8 125 aa3.19□□□□□ -1.9
SCAF11-214ENST00000550893 TREM1Q9NP99 234 aa3.19□□□□□ -1.9
SCAF11-214ENST00000550893 NAGKQ9UJ70 344 aa3.19□□□□□ -1.9
SCAF11-214ENST00000550893 DMBT1Q9UGM3 2413 aaPredicted RBP3.19□□□□□ -1.9
SCAF11-214ENST00000550893 TRGV2A0A075B6R0 118 aa3.18□□□□□ -1.9
SCAF11-214ENST00000550893 A0A1B0GVG6 124 aa3.18□□□□□ -1.9
SCAF11-214ENST00000550893 CRYGDP07320 174 aa3.18□□□□□ -1.9
SCAF11-214ENST00000550893 KRTAP1-4P0C5Y4 121 aa3.18□□□□□ -1.9
SCAF11-214ENST00000550893 SRSF9Q13242 221 aaKnown RBP eCLIP3.18□□□□□ -1.9
SCAF11-214ENST00000550893 SPATA12Q7Z6I5 190 aa3.18□□□□□ -1.9
SCAF11-214ENST00000550893 PRNTQ86SH4 94 aa3.18□□□□□ -1.9
SCAF11-214ENST00000550893 NHLRC2Q8NBF2 726 aa3.18□□□□□ -1.9
SCAF11-214ENST00000550893 C11orf52Q96A22 123 aa3.18□□□□□ -1.9
SCAF11-214ENST00000550893 SPXQ9BT56 116 aa3.18□□□□□ -1.9
SCAF11-214ENST00000550893 ACTR3CQ9C0K3 210 aaPredicted RBP3.18□□□□□ -1.9
SCAF11-214ENST00000550893 TMEM167BQ9NRX6 74 aa3.18□□□□□ -1.9
SCAF11-214ENST00000550893 HHLA3Q9XRX5 114 aa3.18□□□□□ -1.9
SCAF11-214ENST00000550893 ICOSQ9Y6W8 199 aa3.18□□□□□ -1.9
SCAF11-214ENST00000550893 KIF25-AS1Q9Y6Z4 181 aa3.18□□□□□ -1.9
SCAF11-214ENST00000550893 A0A087WTM6 91 aa3.17□□□□□ -1.9
SCAF11-214ENST00000550893 IGHV3-73A0A0B4J1V6 119 aa3.17□□□□□ -1.9
SCAF11-214ENST00000550893 SERTM2A0A1B0GWG4 89 aa3.17□□□□□ -1.9
SCAF11-214ENST00000550893 A0A1W2PPV4 95 aa3.17□□□□□ -1.9
SCAF11-214ENST00000550893 H3BVH4 76 aa3.17□□□□□ -1.9
SCAF11-214ENST00000550893 SIVA1O15304 175 aa3.17□□□□□ -1.9
SCAF11-214ENST00000550893 SNAI2O43623 268 aa3.17□□□□□ -1.9
SCAF11-214ENST00000550893 C1QBP02746 253 aa3.17□□□□□ -1.9
SCAF11-214ENST00000550893 SEC11BP0C7V7 166 aa3.17□□□□□ -1.9
SCAF11-214ENST00000550893 CSN1S1P47710 185 aa3.17□□□□□ -1.9
SCAF11-214ENST00000550893 CCL18P55774 89 aa3.17□□□□□ -1.9
SCAF11-214ENST00000550893 KRTAP26-1Q6PEX3 210 aa3.17□□□□□ -1.9
SCAF11-214ENST00000550893 FAM159AQ6UWV7 190 aa3.17□□□□□ -1.9
SCAF11-214ENST00000550893 TCTE3Q8IZS6 198 aa3.17□□□□□ -1.9
SCAF11-214ENST00000550893 C9orf62Q8N4C0 152 aa3.17□□□□□ -1.9
SCAF11-214ENST00000550893 OR10AG1Q8NH19 301 aa3.17□□□□□ -1.9
SCAF11-214ENST00000550893 CHCHD5Q9BSY4 110 aa3.17□□□□□ -1.9
SCAF11-214ENST00000550893 ZNF471Q9BX82 626 aaPredicted RBP3.17□□□□□ -1.9
SCAF11-214ENST00000550893 IL36BQ9NZH7 164 aa3.17□□□□□ -1.9
SCAF11-214ENST00000550893 TRAV1-1A0A0B4J248 108 aa3.16□□□□□ -1.9
SCAF11-214ENST00000550893 A0A1B0GV50 99 aa3.16□□□□□ -1.9
SCAF11-214ENST00000550893 TRBV6-4A0A1B0GX49 114 aa3.16□□□□□ -1.9
SCAF11-214ENST00000550893 GRIFINA4D1Z8 144 aa3.16□□□□□ -1.9
SCAF11-214ENST00000550893 C19orf71A6NCJ1 209 aa3.16□□□□□ -1.9
SCAF11-214ENST00000550893 FBLL1A6NHQ2 334 aaKnown RBP3.16□□□□□ -1.9
SCAF11-214ENST00000550893 C16orf90A8MZG2 172 aa3.16□□□□□ -1.9
SCAF11-214ENST00000550893 M0R036 132 aa3.16□□□□□ -1.9
SCAF11-214ENST00000550893 MBP02144 154 aa3.16□□□□□ -1.9
SCAF11-214ENST00000550893 IGLC6P0CF74 106 aa3.16□□□□□ -1.9
SCAF11-214ENST00000550893 HAMPP81172 84 aa3.16□□□□□ -1.9
SCAF11-214ENST00000550893 SMUG1Q53HV7 270 aa3.16□□□□□ -1.9
SCAF11-214ENST00000550893 LINC01556Q5JQF7 62 aa3.16□□□□□ -1.9
SCAF11-214ENST00000550893 FAM74A1Q5RGS3 127 aa3.16□□□□□ -1.9
SCAF11-214ENST00000550893 Q6ZSA8 131 aa3.16□□□□□ -1.9
SCAF11-214ENST00000550893 NTM-AS1Q6ZSK4 140 aa3.16□□□□□ -1.9
SCAF11-214ENST00000550893 KRTAP5-2Q701N4 177 aa3.16□□□□□ -1.9
SCAF11-214ENST00000550893 TMUB2Q71RG4 321 aa3.16□□□□□ -1.9
SCAF11-214ENST00000550893 NEGR1Q7Z3B1 354 aa3.16□□□□□ -1.9
SCAF11-214ENST00000550893 IGLV4-3A0A075B6K6 122 aa3.15□□□□□ -1.91
SCAF11-214ENST00000550893 IBA57-AS1B1ANH7 110 aa3.15□□□□□ -1.91
SCAF11-214ENST00000550893 C9JCJ5 164 aa3.15□□□□□ -1.91
SCAF11-214ENST00000550893 K7EN84 100 aa3.15□□□□□ -1.91
SCAF11-214ENST00000550893 TAAR5O14804 337 aa3.15□□□□□ -1.91
SCAF11-214ENST00000550893 PHOX2AO14813 284 aa3.15□□□□□ -1.91
SCAF11-214ENST00000550893 CXCL1P09341 107 aa3.15□□□□□ -1.91
SCAF11-214ENST00000550893 ARMS2P0C7Q2 107 aa3.15□□□□□ -1.91
SCAF11-214ENST00000550893 SULT1A2P50226 295 aa3.15□□□□□ -1.91
SCAF11-214ENST00000550893 MRPL23Q16540 153 aaKnown RBP3.15□□□□□ -1.91
SCAF11-214ENST00000550893 TTC32Q5I0X7 151 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms