RNA–Protein interactions for RNA: ENST00000550880.5

PFDN5-212, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-212ENST00000550880 PLAC8Q9NZF1 115 aa7.01□□□□□ -1.29
PFDN5-212ENST00000550880 KIF25-AS1Q9Y6Z4 181 aa7.01□□□□□ -1.29
PFDN5-212ENST00000550880 A0A0J9YXV3 536 aa7□□□□□ -1.29
PFDN5-212ENST00000550880 TRBV6-1A0A0K0K1D8 114 aa7□□□□□ -1.29
PFDN5-212ENST00000550880 GAS8-AS1O95177 125 aa7□□□□□ -1.29
PFDN5-212ENST00000550880 ATP6V0CP27449 155 aa7□□□□□ -1.29
PFDN5-212ENST00000550880 LINC01559Q495D7 138 aa7□□□□□ -1.29
PFDN5-212ENST00000550880 PRR27Q6MZM9 219 aa7□□□□□ -1.29
PFDN5-212ENST00000550880 COX8CQ7Z4L0 72 aa7□□□□□ -1.29
PFDN5-212ENST00000550880 FMC1Q96HJ9 113 aa7□□□□□ -1.29
PFDN5-212ENST00000550880 ZNF471Q9BX82 626 aaPredicted RBP7□□□□□ -1.29
PFDN5-212ENST00000550880 TNFSF18Q9UNG2 199 aa7□□□□□ -1.29
PFDN5-212ENST00000550880 SMIM17P0DL12 118 aa6.99□□□□□ -1.29
PFDN5-212ENST00000550880 UBE2G2P60604 165 aa6.99□□□□□ -1.29
PFDN5-212ENST00000550880 ZNF674Q2M3X9 581 aa6.99□□□□□ -1.29
PFDN5-212ENST00000550880 CFAP161Q6P656 301 aa6.99□□□□□ -1.29
PFDN5-212ENST00000550880 NTM-AS1Q6ZSK4 140 aa6.99□□□□□ -1.29
PFDN5-212ENST00000550880 VAX2Q9UIW0 290 aa6.99□□□□□ -1.29
PFDN5-212ENST00000550880 IGHV1-24A0A0C4DH33 117 aa6.98□□□□□ -1.29
PFDN5-212ENST00000550880 PRR3P79522 188 aaKnown RBP6.98□□□□□ -1.29
PFDN5-212ENST00000550880 MAJINQ3KP22 176 aa6.98□□□□□ -1.29
PFDN5-212ENST00000550880 SPANXN1Q5VSR9 72 aa6.98□□□□□ -1.29
PFDN5-212ENST00000550880 SPINK6Q6UWN8 80 aa6.98□□□□□ -1.29
PFDN5-212ENST00000550880 S100ZQ8WXG8 99 aa6.98□□□□□ -1.29
PFDN5-212ENST00000550880 NDUFS6O75380 124 aaKnown RBP6.97□□□□□ -1.29
PFDN5-212ENST00000550880 RAB5CP51148 216 aa6.97□□□□□ -1.29
PFDN5-212ENST00000550880 COX6A2Q02221 97 aa6.97□□□□□ -1.29
PFDN5-212ENST00000550880 IQCJQ1A5X6 159 aa6.97□□□□□ -1.29
PFDN5-212ENST00000550880 NDUFA13Q9P0J0 144 aa6.97□□□□□ -1.29
PFDN5-212ENST00000550880 CTXND1A0A1B0GTU2 59 aa6.96□□□□□ -1.3
PFDN5-212ENST00000550880 FAM74A7A6NL05 159 aa6.96□□□□□ -1.3
PFDN5-212ENST00000550880 SLPIP03973 132 aa6.96□□□□□ -1.3
PFDN5-212ENST00000550880 RPS10P46783 165 aaKnown RBP6.96□□□□□ -1.3
PFDN5-212ENST00000550880 KRTAP10-8P60410 259 aa6.96□□□□□ -1.3
PFDN5-212ENST00000550880 ODF1Q14990 250 aa6.96□□□□□ -1.3
PFDN5-212ENST00000550880 LINC00299Q6ZSB3 139 aa6.96□□□□□ -1.3
PFDN5-212ENST00000550880 OR10AG1Q8NH19 301 aa6.96□□□□□ -1.3
PFDN5-212ENST00000550880 LYPD6BQ8NI32 183 aa6.96□□□□□ -1.3
PFDN5-212ENST00000550880 TCEAL7Q9BRU2 100 aa6.96□□□□□ -1.3
PFDN5-212ENST00000550880 MARVELD1Q9BSK0 173 aa6.96□□□□□ -1.3
PFDN5-212ENST00000550880 IGKV2-24A0A0C4DH68 120 aa6.95□□□□□ -1.3
PFDN5-212ENST00000550880 A0A1B0GUV1 79 aa6.95□□□□□ -1.3
PFDN5-212ENST00000550880 H7C1H1 209 aa6.95□□□□□ -1.3
PFDN5-212ENST00000550880 LTAP01374 205 aa6.95□□□□□ -1.3
PFDN5-212ENST00000550880 SULT1A2P50226 295 aa6.95□□□□□ -1.3
PFDN5-212ENST00000550880 STPG4Q8N801 248 aa6.95□□□□□ -1.3
PFDN5-212ENST00000550880 AQP10Q96PS8 301 aa6.95□□□□□ -1.3
PFDN5-212ENST00000550880 TMEM243Q9BU79 118 aa6.95□□□□□ -1.3
PFDN5-212ENST00000550880 LINC00474Q9P2X8 69 aa6.95□□□□□ -1.3
PFDN5-212ENST00000550880 PKIGQ9Y2B9 76 aa6.95□□□□□ -1.3
PFDN5-212ENST00000550880 UBE2L6O14933 153 aa6.94□□□□□ -1.3
PFDN5-212ENST00000550880 UPK1BO75841 260 aa6.94□□□□□ -1.3
PFDN5-212ENST00000550880 CXCL1P09341 107 aa6.94□□□□□ -1.3
PFDN5-212ENST00000550880 SSTP61278 116 aa6.94□□□□□ -1.3
PFDN5-212ENST00000550880 C20orf203Q8NBC4 194 aa6.94□□□□□ -1.3
PFDN5-212ENST00000550880 STOML3Q8TAV4 291 aa6.94□□□□□ -1.3
PFDN5-212ENST00000550880 AP1S3Q96PC3 154 aa6.94□□□□□ -1.3
PFDN5-212ENST00000550880 BORCS7-ASMTA0A0B4J1R7 106 aa6.93□□□□□ -1.3
PFDN5-212ENST00000550880 MUC21A0A0G2JKD1 596 aa6.93□□□□□ -1.3
PFDN5-212ENST00000550880 MUC21A0A140T8X8 626 aa6.93□□□□□ -1.3
PFDN5-212ENST00000550880 SNAI2O43623 268 aa6.93□□□□□ -1.3
PFDN5-212ENST00000550880 S100A9P06702 114 aaKnown RBP6.93□□□□□ -1.3
PFDN5-212ENST00000550880 OR5AL1P0C617 328 aa6.93□□□□□ -1.3
PFDN5-212ENST00000550880 AKR1C3P42330 323 aa6.93□□□□□ -1.3
PFDN5-212ENST00000550880 CST9LP1Q5W188 147 aa6.93□□□□□ -1.3
PFDN5-212ENST00000550880 PRSS3P2Q8NHM4 247 aa6.93□□□□□ -1.3
PFDN5-212ENST00000550880 SSBP4Q9BWG4 385 aaPredicted RBP6.93□□□□□ -1.3
PFDN5-212ENST00000550880 IGLV4-60A0A075B6I1 120 aa6.92□□□□□ -1.3
PFDN5-212ENST00000550880 GAGE12HA6NDE8 117 aa6.92□□□□□ -1.3
PFDN5-212ENST00000550880 MGPP08493 103 aa6.92□□□□□ -1.3
PFDN5-212ENST00000550880 FHITP49789 147 aa6.92□□□□□ -1.3
PFDN5-212ENST00000550880 DEFA1P59665 94 aa6.92□□□□□ -1.3
PFDN5-212ENST00000550880 DEFA3P59666 94 aa6.92□□□□□ -1.3
PFDN5-212ENST00000550880 ZNF726P1Q15940 193 aa6.92□□□□□ -1.3
PFDN5-212ENST00000550880 AKR1C8PQ5T2L2 129 aa6.92□□□□□ -1.3
PFDN5-212ENST00000550880 Q6ZRP5 223 aa6.92□□□□□ -1.3
PFDN5-212ENST00000550880 INO80EQ8NBZ0 244 aaPredicted RBP6.92□□□□□ -1.3
PFDN5-212ENST00000550880 HIGD2BQ4VC39 106 aa6.91□□□□□ -1.3
PFDN5-212ENST00000550880 C15orf56Q8N910 161 aa6.91□□□□□ -1.3
PFDN5-212ENST00000550880 IGKV3OR2-268A0A0C4DH90 116 aa6.9□□□□□ -1.3
PFDN5-212ENST00000550880 MAP1LC3B2A6NCE7 125 aa6.9□□□□□ -1.3
PFDN5-212ENST00000550880 FAM231BA6NCW3 169 aa6.9□□□□□ -1.3
PFDN5-212ENST00000550880 M0QY20 66 aa6.9□□□□□ -1.3
PFDN5-212ENST00000550880 MAP1LC3BQ9GZQ8 125 aa6.9□□□□□ -1.3
PFDN5-212ENST00000550880 GFRA4Q9GZZ7 299 aa6.9□□□□□ -1.3
PFDN5-212ENST00000550880 AMTP48728 403 aa6.89□□□□□ -1.31
PFDN5-212ENST00000550880 NKX2-5P52952 324 aaPredicted RBP6.89□□□□□ -1.31
PFDN5-212ENST00000550880 SRSF9Q13242 221 aaKnown RBP eCLIP6.89□□□□□ -1.31
PFDN5-212ENST00000550880 RPL7L1Q6DKI1 246 aaKnown RBP6.89□□□□□ -1.31
PFDN5-212ENST00000550880 BAGE2Q86Y30 109 aa6.89□□□□□ -1.31
PFDN5-212ENST00000550880 PGLYRP4Q96LB8 373 aa6.89□□□□□ -1.31
PFDN5-212ENST00000550880 A0A096LNI7 61 aa6.88□□□□□ -1.31
PFDN5-212ENST00000550880 GVQW2A0A096LPI5 108 aaPredicted RBP6.88□□□□□ -1.31
PFDN5-212ENST00000550880 COTL1Q14019 142 aa6.88□□□□□ -1.31
PFDN5-212ENST00000550880 SUMO4Q6EEV6 95 aa6.88□□□□□ -1.31
PFDN5-212ENST00000550880 RASL11AQ6T310 242 aa6.88□□□□□ -1.31
PFDN5-212ENST00000550880 TPPP3Q9BW30 176 aa6.88□□□□□ -1.31
PFDN5-212ENST00000550880 PFDN1O60925 122 aa6.87□□□□□ -1.31
PFDN5-212ENST00000550880 IFITM3Q01628 133 aa6.87□□□□□ -1.31
PFDN5-212ENST00000550880 AMMECR1LQ6DCA0 310 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms