RNA–Protein interactions for RNA: ENST00000548097.5

KRT4-201, Transcript of keratin 4, humanhuman

TSL 1 (best)

Gene KRT4, Length 1,839 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-201ENST00000548097 RASL11AQ6T310 242 aa11.96□□□□□ -0.49
KRT4-201ENST00000548097 NUDT3O95989 172 aa11.95□□□□□ -0.5
KRT4-201ENST00000548097 RAB5BP61020 215 aa11.95□□□□□ -0.5
KRT4-201ENST00000548097 DEFB104AQ8WTQ1 72 aa11.95□□□□□ -0.5
KRT4-201ENST00000548097 FRZBQ92765 325 aa11.95□□□□□ -0.5
KRT4-201ENST00000548097 GNB1LQ9BYB4 327 aa11.95□□□□□ -0.5
KRT4-201ENST00000548097 D6R8Y8 96 aa11.95□□□□□ -0.5
KRT4-201ENST00000548097 RHOHQ15669 191 aa11.95□□□□□ -0.5
KRT4-201ENST00000548097 NEXN-AS1Q8NBZ9 246 aa11.95□□□□□ -0.5
KRT4-201ENST00000548097 MRPL18Q9H0U6 180 aaKnown RBP11.95□□□□□ -0.5
KRT4-201ENST00000548097 DYNC2H1Q8NCM8 4307 aaKnown RBP11.94□□□□□ -0.5
KRT4-201ENST00000548097 ZNRF2Q8NHG8 242 aa11.94□□□□□ -0.5
KRT4-201ENST00000548097 PRADC1Q9BSG0 188 aa11.94□□□□□ -0.5
KRT4-201ENST00000548097 APCSP02743 223 aa11.93□□□□□ -0.5
KRT4-201ENST00000548097 CKS2P33552 79 aa11.93□□□□□ -0.5
KRT4-201ENST00000548097 AKR1D1P51857 326 aa11.93□□□□□ -0.5
KRT4-201ENST00000548097 LYSTQ99698 3801 aa11.93□□□□□ -0.5
KRT4-201ENST00000548097 TRAPPC1Q9Y5R8 145 aa11.93□□□□□ -0.5
KRT4-201ENST00000548097 NUPR2A6NF83 97 aa11.93□□□□□ -0.5
KRT4-201ENST00000548097 HLA-DQA1P01909 254 aa11.93□□□□□ -0.5
KRT4-201ENST00000548097 FABP9Q0Z7S8 132 aa11.93□□□□□ -0.5
KRT4-201ENST00000548097 IGHV3-38A0A0C4DH36 116 aa11.92□□□□□ -0.5
KRT4-201ENST00000548097 C12orf57Q99622 126 aa11.92□□□□□ -0.5
KRT4-201ENST00000548097 PLECQ15149 4684 aaKnown RBP11.91□□□□□ -0.5
KRT4-201ENST00000548097 NRACQ8N912 160 aa11.91□□□□□ -0.5
KRT4-201ENST00000548097 MRAP2Q96G30 205 aa11.91□□□□□ -0.5
KRT4-201ENST00000548097 C1orf196B1AJZ1 125 aa11.9□□□□□ -0.5
KRT4-201ENST00000548097 H7C1H1 209 aa11.9□□□□□ -0.5
KRT4-201ENST00000548097 NPYP01303 97 aa11.9□□□□□ -0.5
KRT4-201ENST00000548097 RAB5AP20339 215 aa11.9□□□□□ -0.5
KRT4-201ENST00000548097 OR10J3Q5JRS4 329 aa11.9□□□□□ -0.5
KRT4-201ENST00000548097 NEGR1Q7Z3B1 354 aa11.9□□□□□ -0.5
KRT4-201ENST00000548097 NIT2Q9NQR4 276 aa11.9□□□□□ -0.5
KRT4-201ENST00000548097 ICOSQ9Y6W8 199 aa11.9□□□□□ -0.5
KRT4-201ENST00000548097 TENM2Q9NT68 2774 aa11.9□□□□□ -0.5
KRT4-201ENST00000548097 TNFRSF18Q9Y5U5 241 aa11.9□□□□□ -0.5
KRT4-201ENST00000548097 TRBV7-3A0A075B6L6 115 aa11.89□□□□□ -0.51
KRT4-201ENST00000548097 TRBV10-1A0A0K0K1A3 114 aa11.89□□□□□ -0.51
KRT4-201ENST00000548097 MT-ND6P03923 174 aa11.89□□□□□ -0.51
KRT4-201ENST00000548097 SRIP30626 198 aa11.89□□□□□ -0.51
KRT4-201ENST00000548097 RPL36AP83881 106 aaKnown RBP11.89□□□□□ -0.51
KRT4-201ENST00000548097 COX19Q49B96 90 aa11.89□□□□□ -0.51
KRT4-201ENST00000548097 CASC10Q5T4H9 136 aa11.89□□□□□ -0.51
KRT4-201ENST00000548097 ORMDL3Q8N138 153 aa11.89□□□□□ -0.51
KRT4-201ENST00000548097 RPL36ALQ969Q0 106 aaKnown RBP11.89□□□□□ -0.51
KRT4-201ENST00000548097 PRELID3AQ96N28 172 aa11.89□□□□□ -0.51
KRT4-201ENST00000548097 APLNQ9ULZ1 77 aa11.89□□□□□ -0.51
KRT4-201ENST00000548097 KLK5Q9Y337 293 aaPredicted RBP11.89□□□□□ -0.51
KRT4-201ENST00000548097 PCP4L1A6NKN8 68 aa11.88□□□□□ -0.51
KRT4-201ENST00000548097 TNFRSF6BO95407 300 aa11.88□□□□□ -0.51
KRT4-201ENST00000548097 TRGC2P03986 189 aa11.88□□□□□ -0.51
KRT4-201ENST00000548097 SMIM6P0DI80 62 aa11.88□□□□□ -0.51
KRT4-201ENST00000548097 MRPL23Q16540 153 aaKnown RBP11.88□□□□□ -0.51
KRT4-201ENST00000548097 H3BNG1 76 aa11.88□□□□□ -0.51
KRT4-201ENST00000548097 LINC00694P0DN24 101 aa11.88□□□□□ -0.51
KRT4-201ENST00000548097 UBE2D3P61077 147 aa11.88□□□□□ -0.51
KRT4-201ENST00000548097 UBE2D2P62837 147 aa11.88□□□□□ -0.51
KRT4-201ENST00000548097 LOC389332A0A1B0GUA5 103 aa11.86□□□□□ -0.51
KRT4-201ENST00000548097 S100A6P06703 90 aa11.86□□□□□ -0.51
KRT4-201ENST00000548097 ATP6V0E2Q8NHE4 81 aa11.86□□□□□ -0.51
KRT4-201ENST00000548097 SDHAF1A6NFY7 115 aa11.86□□□□□ -0.51
KRT4-201ENST00000548097 C15orf53Q8NAA6 179 aa11.86□□□□□ -0.51
KRT4-201ENST00000548097 DNAJC30Q96LL9 226 aa11.86□□□□□ -0.51
KRT4-201ENST00000548097 ALKBH7Q9BT30 221 aaPredicted RBP11.86□□□□□ -0.51
KRT4-201ENST00000548097 ST20Q9HBF5 79 aa11.86□□□□□ -0.51
KRT4-201ENST00000548097 PPBPP02775 128 aa11.85□□□□□ -0.51
KRT4-201ENST00000548097 C5orf52A6NGY3 159 aa11.84□□□□□ -0.51
KRT4-201ENST00000548097 C3orf84H3BNL1 204 aa11.84□□□□□ -0.51
KRT4-201ENST00000548097 SUMO2P61956 95 aaKnown RBP11.84□□□□□ -0.51
KRT4-201ENST00000548097 ESRGQ1W209 222 aa11.84□□□□□ -0.51
KRT4-201ENST00000548097 TMEM70Q9BUB7 260 aa11.84□□□□□ -0.51
KRT4-201ENST00000548097 TRBV6-5A0A0K0K1A5 114 aa11.83□□□□□ -0.51
KRT4-201ENST00000548097 IQCJQ1A5X6 159 aa11.83□□□□□ -0.51
KRT4-201ENST00000548097 LYPD5Q6UWN5 251 aa11.83□□□□□ -0.51
KRT4-201ENST00000548097 PHOX2AO14813 284 aa11.83□□□□□ -0.52
KRT4-201ENST00000548097 POLR2KP53803 58 aaKnown RBP11.82□□□□□ -0.52
KRT4-201ENST00000548097 SNRPEP62304 92 aaKnown RBP11.81□□□□□ -0.52
KRT4-201ENST00000548097 NTM-AS1Q6ZSK4 140 aa11.81□□□□□ -0.52
KRT4-201ENST00000548097 GTSF1LQ9H1H1 148 aa11.81□□□□□ -0.52
KRT4-201ENST00000548097 PPP1R17O96001 155 aa11.81□□□□□ -0.52
KRT4-201ENST00000548097 PMCHP20382 165 aa11.81□□□□□ -0.52
KRT4-201ENST00000548097 TCAPO15273 167 aa11.8□□□□□ -0.52
KRT4-201ENST00000548097 DAZ4Q86SG3 579 aaKnown RBP11.8□□□□□ -0.52
KRT4-201ENST00000548097 C20orf78Q9BR46 151 aa11.8□□□□□ -0.52
KRT4-201ENST00000548097 SMIM2Q9BVW6 85 aa11.8□□□□□ -0.52
KRT4-201ENST00000548097 MAP1LC3AQ9H492 121 aa11.8□□□□□ -0.52
KRT4-201ENST00000548097 DAZ3Q9NR90 486 aaKnown RBP11.8□□□□□ -0.52
KRT4-201ENST00000548097 LINC00588Q9Y4M8 146 aa11.8□□□□□ -0.52
KRT4-201ENST00000548097 I3L3M4 83 aa11.79□□□□□ -0.52
KRT4-201ENST00000548097 IFI27P40305 119 aaPredicted RBP11.79□□□□□ -0.52
KRT4-201ENST00000548097 LAMTOR2Q9Y2Q5 125 aa11.79□□□□□ -0.52
KRT4-201ENST00000548097 TRBV27A0A0K0K1C4 114 aa11.79□□□□□ -0.52
KRT4-201ENST00000548097 C18orf32Q8TCD1 76 aa11.79□□□□□ -0.52
KRT4-201ENST00000548097 VCYO14598 125 aa11.78□□□□□ -0.52
KRT4-201ENST00000548097 TSHBP01222 138 aa11.78□□□□□ -0.52
KRT4-201ENST00000548097 IGLV2-18A0A075B6J9 118 aa11.77□□□□□ -0.52
KRT4-201ENST00000548097 SH2D6Q7Z4S9 175 aa11.77□□□□□ -0.52
KRT4-201ENST00000548097 CCL18P55774 89 aa11.76□□□□□ -0.53
KRT4-201ENST00000548097 TCTAP57738 103 aa11.76□□□□□ -0.53
KRT4-201ENST00000548097 COTL1Q14019 142 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms