RNA–Protein interactions for RNA: ENST00000547555.5

LETMD1-210, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 1,658 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-210ENST00000547555 TRBV6-5A0A0K0K1A5 114 aa12.83□□□□□ -0.35
LETMD1-210ENST00000547555 IGIPA6NJ69 53 aa12.83□□□□□ -0.35
LETMD1-210ENST00000547555 SCGB1C2P0DMR2 95 aa12.83□□□□□ -0.35
LETMD1-210ENST00000547555 S100A4P26447 101 aaKnown RBP12.83□□□□□ -0.35
LETMD1-210ENST00000547555 HILS1P60008 231 aa12.83□□□□□ -0.35
LETMD1-210ENST00000547555 ZFAND6Q6FIF0 208 aa12.83□□□□□ -0.35
LETMD1-210ENST00000547555 ARL17AQ8IVW1 177 aa12.83□□□□□ -0.35
LETMD1-210ENST00000547555 TMEM86BQ8N661 226 aa12.83□□□□□ -0.35
LETMD1-210ENST00000547555 ZFAND2AQ8N6M9 145 aa12.83□□□□□ -0.35
LETMD1-210ENST00000547555 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.83□□□□□ -0.36
LETMD1-210ENST00000547555 H3BUX3 64 aa12.83□□□□□ -0.36
LETMD1-210ENST00000547555 IGHV4-59P01825 116 aa12.83□□□□□ -0.36
LETMD1-210ENST00000547555 POLR2KP53803 58 aaKnown RBP12.83□□□□□ -0.36
LETMD1-210ENST00000547555 CCDC140Q96MF4 163 aa12.83□□□□□ -0.36
LETMD1-210ENST00000547555 SPANXDQ9BXN6 97 aa12.83□□□□□ -0.36
LETMD1-210ENST00000547555 ESM1Q9NQ30 184 aa12.83□□□□□ -0.36
LETMD1-210ENST00000547555 ZFHX3Q15911 3703 aa12.82□□□□□ -0.36
LETMD1-210ENST00000547555 MRPL23Q16540 153 aaKnown RBP12.82□□□□□ -0.36
LETMD1-210ENST00000547555 GPHB5Q86YW7 130 aa12.82□□□□□ -0.36
LETMD1-210ENST00000547555 KIR2DL4Q99706 377 aa12.82□□□□□ -0.36
LETMD1-210ENST00000547555 IGLV4-69A0A075B6H9 119 aa12.81□□□□□ -0.36
LETMD1-210ENST00000547555 DNAJC9-AS1A6NH13 148 aa12.81□□□□□ -0.36
LETMD1-210ENST00000547555 IGHV3-23P01764 117 aa12.81□□□□□ -0.36
LETMD1-210ENST00000547555 CARD19Q96LW7 228 aa12.81□□□□□ -0.36
LETMD1-210ENST00000547555 NIPBLQ6KC79 2804 aaeCLIP12.8□□□□□ -0.36
LETMD1-210ENST00000547555 TCL1BO95988 128 aa12.8□□□□□ -0.36
LETMD1-210ENST00000547555 CRYGDP07320 174 aa12.8□□□□□ -0.36
LETMD1-210ENST00000547555 RHOHQ15669 191 aa12.8□□□□□ -0.36
LETMD1-210ENST00000547555 ZNF876PQ49A33 203 aa12.8□□□□□ -0.36
LETMD1-210ENST00000547555 VPREB3Q9UKI3 123 aa12.8□□□□□ -0.36
LETMD1-210ENST00000547555 A6NDX4 124 aa12.8□□□□□ -0.36
LETMD1-210ENST00000547555 H3BUA1 57 aa12.8□□□□□ -0.36
LETMD1-210ENST00000547555 NDUFA4O00483 81 aa12.8□□□□□ -0.36
LETMD1-210ENST00000547555 CFC1BP0CG36 223 aa12.8□□□□□ -0.36
LETMD1-210ENST00000547555 CFC1P0CG37 223 aa12.8□□□□□ -0.36
LETMD1-210ENST00000547555 XGP55808 180 aa12.8□□□□□ -0.36
LETMD1-210ENST00000547555 CUBNO60494 3623 aa12.79□□□□□ -0.36
LETMD1-210ENST00000547555 TRBV27A0A0K0K1C4 114 aa12.79□□□□□ -0.36
LETMD1-210ENST00000547555 SDHAF1A6NFY7 115 aa12.79□□□□□ -0.36
LETMD1-210ENST00000547555 MT-ATP8P03928 68 aa12.79□□□□□ -0.36
LETMD1-210ENST00000547555 RPL13AP40429 203 aaKnown RBP12.79□□□□□ -0.36
LETMD1-210ENST00000547555 GAGE5Q13069 117 aa12.79□□□□□ -0.36
LETMD1-210ENST00000547555 GAGE6Q13070 117 aa12.79□□□□□ -0.36
LETMD1-210ENST00000547555 RNF183Q96D59 192 aa12.79□□□□□ -0.36
LETMD1-210ENST00000547555 CLUHP3Q96NS8 147 aa12.79□□□□□ -0.36
LETMD1-210ENST00000547555 CITED1Q99966 193 aa12.79□□□□□ -0.36
LETMD1-210ENST00000547555 KIF25-AS1Q9Y6Z4 181 aa12.79□□□□□ -0.36
LETMD1-210ENST00000547555 CLEC19AQ6UXS0 136 aa12.78□□□□□ -0.36
LETMD1-210ENST00000547555 PLEKHB2Q96CS7 222 aa12.78□□□□□ -0.36
LETMD1-210ENST00000547555 SOCS3O14543 225 aa12.77□□□□□ -0.36
LETMD1-210ENST00000547555 LEPROTO15243 131 aa12.77□□□□□ -0.36
LETMD1-210ENST00000547555 ATP6V0E1O15342 81 aa12.77□□□□□ -0.36
LETMD1-210ENST00000547555 RNASE1P07998 156 aaKnown RBP12.77□□□□□ -0.36
LETMD1-210ENST00000547555 ZFP2Q6ZN57 461 aa12.77□□□□□ -0.36
LETMD1-210ENST00000547555 DUX5Q96PT3 197 aa12.77□□□□□ -0.36
LETMD1-210ENST00000547555 SLC25A20O43772 301 aa12.77□□□□□ -0.37
LETMD1-210ENST00000547555 LY6EQ16553 131 aa12.77□□□□□ -0.37
LETMD1-210ENST00000547555 C14orf178Q8N769 122 aaPredicted RBP12.77□□□□□ -0.37
LETMD1-210ENST00000547555 J3QQQ9 107 aa12.76□□□□□ -0.37
LETMD1-210ENST00000547555 RHODO00212 210 aa12.76□□□□□ -0.37
LETMD1-210ENST00000547555 PRB4P10163 310 aaPredicted RBP12.76□□□□□ -0.37
LETMD1-210ENST00000547555 LGALS3P17931 250 aaKnown RBP12.76□□□□□ -0.37
LETMD1-210ENST00000547555 LINC00315P59091 139 aa12.76□□□□□ -0.37
LETMD1-210ENST00000547555 ATXN8Q156A1 80 aa12.76□□□□□ -0.37
LETMD1-210ENST00000547555 NSUN5P1Q3KNT7 163 aa12.76□□□□□ -0.37
LETMD1-210ENST00000547555 TMEM219Q86XT9 240 aa12.76□□□□□ -0.37
LETMD1-210ENST00000547555 RPL39LQ96EH5 51 aaKnown RBP12.76□□□□□ -0.37
LETMD1-210ENST00000547555 ODF3Q96PU9 254 aa12.76□□□□□ -0.37
LETMD1-210ENST00000547555 ANAPC13Q9BS18 74 aa12.76□□□□□ -0.37
LETMD1-210ENST00000547555 LGALS9O00182 355 aa12.75□□□□□ -0.37
LETMD1-210ENST00000547555 TSHBP01222 138 aa12.75□□□□□ -0.37
LETMD1-210ENST00000547555 ECSCRQ19T08 205 aa12.75□□□□□ -0.37
LETMD1-210ENST00000547555 ANXA2RQ3ZCQ2 193 aa12.75□□□□□ -0.37
LETMD1-210ENST00000547555 C19orf54Q5BKX5 351 aa12.75□□□□□ -0.37
LETMD1-210ENST00000547555 PRR9Q5T870 116 aa12.75□□□□□ -0.37
LETMD1-210ENST00000547555 USMG5Q96IX5 58 aa12.75□□□□□ -0.37
LETMD1-210ENST00000547555 AMELXQ99217 191 aa12.75□□□□□ -0.37
LETMD1-210ENST00000547555 KLK15Q9H2R5 256 aa12.75□□□□□ -0.37
LETMD1-210ENST00000547555 TP53TG1Q9Y2A0 90 aa12.75□□□□□ -0.37
LETMD1-210ENST00000547555 TRBV30A0A0K0K1B3 111 aa12.74□□□□□ -0.37
LETMD1-210ENST00000547555 DUSP14O95147 198 aaKnown RBP12.74□□□□□ -0.37
LETMD1-210ENST00000547555 IGHV3-33P01772 117 aa12.74□□□□□ -0.37
LETMD1-210ENST00000547555 RNASE3P12724 160 aaKnown RBP12.74□□□□□ -0.37
LETMD1-210ENST00000547555 ANKRD29Q8N6D5 301 aa12.74□□□□□ -0.37
LETMD1-210ENST00000547555 MDFICQ9P1T7 246 aa12.74□□□□□ -0.37
LETMD1-210ENST00000547555 PRIMA1Q86XR5 153 aa12.73□□□□□ -0.37
LETMD1-210ENST00000547555 MOB4Q9Y3A3 225 aa12.73□□□□□ -0.37
LETMD1-210ENST00000547555 JMJD1CQ15652 2540 aa12.73□□□□□ -0.37
LETMD1-210ENST00000547555 NF1P21359 2839 aa12.73□□□□□ -0.37
LETMD1-210ENST00000547555 SETD2Q9BYW2 2564 aaPredicted RBP12.73□□□□□ -0.37
LETMD1-210ENST00000547555 KLLNB2CW77 178 aa12.73□□□□□ -0.37
LETMD1-210ENST00000547555 MGPP08493 103 aa12.73□□□□□ -0.37
LETMD1-210ENST00000547555 FHL3Q13643 280 aa12.73□□□□□ -0.37
LETMD1-210ENST00000547555 FAM240AA0A1B0GVK7 77 aa12.72□□□□□ -0.37
LETMD1-210ENST00000547555 GAGE2BQ13066 116 aa12.72□□□□□ -0.37
LETMD1-210ENST00000547555 GAGE2EQ4V326 116 aa12.72□□□□□ -0.37
LETMD1-210ENST00000547555 C5orf56Q8N8D9 126 aa12.72□□□□□ -0.37
LETMD1-210ENST00000547555 TMEM263Q8WUH6 116 aaKnown RBP12.72□□□□□ -0.37
LETMD1-210ENST00000547555 GAGE2DQ9UEU5 116 aa12.72□□□□□ -0.37
LETMD1-210ENST00000547555 C2CD3Q4AC94 2353 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms