RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 TRPT1Q86TN4 253 aaKnown RBP8.66□□□□□ -1.02
CCDC38-202ENST00000546386 ZNF479Q96JC4 524 aa8.66□□□□□ -1.02
CCDC38-202ENST00000546386 K7EMI3 77 aa8.66□□□□□ -1.02
CCDC38-202ENST00000546386 M0QY20 66 aa8.66□□□□□ -1.02
CCDC38-202ENST00000546386 GTSCR1Q86UQ5 136 aa8.66□□□□□ -1.02
CCDC38-202ENST00000546386 POM121L12Q8N7R1 296 aa8.66□□□□□ -1.02
CCDC38-202ENST00000546386 NDUFAF3Q9BU61 184 aa8.66□□□□□ -1.02
CCDC38-202ENST00000546386 ST20Q9HBF5 79 aa8.66□□□□□ -1.02
CCDC38-202ENST00000546386 TRBV7-9A0A0J9YWB2 115 aa8.65□□□□□ -1.02
CCDC38-202ENST00000546386 TNP2Q05952 138 aa8.65□□□□□ -1.02
CCDC38-202ENST00000546386 C2orf66Q6UXQ4 117 aa8.65□□□□□ -1.02
CCDC38-202ENST00000546386 C11orf72Q8NBR9 251 aa8.65□□□□□ -1.02
CCDC38-202ENST00000546386 MIEN1Q9BRT3 115 aa8.65□□□□□ -1.02
CCDC38-202ENST00000546386 MRPL35Q9NZE8 188 aaKnown RBP8.65□□□□□ -1.02
CCDC38-202ENST00000546386 GAGE12BA1L429 117 aa8.65□□□□□ -1.03
CCDC38-202ENST00000546386 PRSS29PA6NIE9 313 aa8.65□□□□□ -1.03
CCDC38-202ENST00000546386 GAGE7O76087 117 aa8.65□□□□□ -1.03
CCDC38-202ENST00000546386 GAGE12FP0CL80 117 aa8.65□□□□□ -1.03
CCDC38-202ENST00000546386 GAGE12GP0CL81 117 aa8.65□□□□□ -1.03
CCDC38-202ENST00000546386 GAGE12IP0CL82 117 aa8.65□□□□□ -1.03
CCDC38-202ENST00000546386 NDUFA11Q86Y39 141 aa8.65□□□□□ -1.03
CCDC38-202ENST00000546386 PCP2Q8IVA1 136 aa8.65□□□□□ -1.03
CCDC38-202ENST00000546386 SYT8Q8NBV8 401 aa8.65□□□□□ -1.03
CCDC38-202ENST00000546386 MRAP2Q96G30 205 aa8.65□□□□□ -1.03
CCDC38-202ENST00000546386 SCGB3A1Q96QR1 104 aa8.65□□□□□ -1.03
CCDC38-202ENST00000546386 TP53TG1Q9Y2A0 90 aa8.65□□□□□ -1.03
CCDC38-202ENST00000546386 DEFB130BP0DP73 79 aa8.64□□□□□ -1.03
CCDC38-202ENST00000546386 DEFB130AP0DP74 79 aa8.64□□□□□ -1.03
CCDC38-202ENST00000546386 TRGV11A0A075B6L2 103 aa8.64□□□□□ -1.03
CCDC38-202ENST00000546386 IGKV2D-26A0A0A0MRZ7 120 aa8.64□□□□□ -1.03
CCDC38-202ENST00000546386 PRB2P02812 416 aaPredicted RBP8.64□□□□□ -1.03
CCDC38-202ENST00000546386 KRTAP24-1Q3LI83 254 aa8.64□□□□□ -1.03
CCDC38-202ENST00000546386 LINC01545Q5VT33 79 aa8.64□□□□□ -1.03
CCDC38-202ENST00000546386 ODF3Q96PU9 254 aa8.64□□□□□ -1.03
CCDC38-202ENST00000546386 CFAP126Q5VTH2 177 aa8.63□□□□□ -1.03
CCDC38-202ENST00000546386 LOC100131303A0A0U1RQF7 123 aa8.63□□□□□ -1.03
CCDC38-202ENST00000546386 C20orf202A1L168 122 aa8.63□□□□□ -1.03
CCDC38-202ENST00000546386 NUTF2P61970 127 aaKnown RBP8.63□□□□□ -1.03
CCDC38-202ENST00000546386 CMYA5Q8N3K9 4069 aa8.62□□□□□ -1.03
CCDC38-202ENST00000546386 HSBP1L1C9JCN9 74 aa8.62□□□□□ -1.03
CCDC38-202ENST00000546386 M0R2P5 195 aa8.62□□□□□ -1.03
CCDC38-202ENST00000546386 NXPH4O95158 308 aa8.62□□□□□ -1.03
CCDC38-202ENST00000546386 HNRNPA3P51991 378 aaKnown RBP8.62□□□□□ -1.03
CCDC38-202ENST00000546386 DEFB135Q30KP9 77 aa8.62□□□□□ -1.03
CCDC38-202ENST00000546386 PET117Q6UWS5 81 aa8.62□□□□□ -1.03
CCDC38-202ENST00000546386 C20orf144Q9BQM9 153 aa8.62□□□□□ -1.03
CCDC38-202ENST00000546386 ODF1Q14990 250 aa8.62□□□□□ -1.03
CCDC38-202ENST00000546386 ZFP2Q6ZN57 461 aa8.62□□□□□ -1.03
CCDC38-202ENST00000546386 IGHV3-64A0A075B6Q5 118 aa8.61□□□□□ -1.03
CCDC38-202ENST00000546386 ZNF415Q09FC8 603 aa8.61□□□□□ -1.03
CCDC38-202ENST00000546386 BEAN1Q3B7T3 259 aa8.61□□□□□ -1.03
CCDC38-202ENST00000546386 TRGV2A0A075B6R0 118 aa8.61□□□□□ -1.03
CCDC38-202ENST00000546386 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.61□□□□□ -1.03
CCDC38-202ENST00000546386 A0A096LPF7 62 aa8.61□□□□□ -1.03
CCDC38-202ENST00000546386 TRAV25A0A0B4J276 109 aa8.61□□□□□ -1.03
CCDC38-202ENST00000546386 IGKV2-29A2NJV5 120 aaPredicted RBP8.61□□□□□ -1.03
CCDC38-202ENST00000546386 TENM2Q9NT68 2774 aa8.6□□□□□ -1.03
CCDC38-202ENST00000546386 TRAV8-6A0A0B4J262 113 aa8.6□□□□□ -1.03
CCDC38-202ENST00000546386 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.6□□□□□ -1.03
CCDC38-202ENST00000546386 KIR2DL4Q99706 377 aa8.6□□□□□ -1.03
CCDC38-202ENST00000546386 TSHBP01222 138 aa8.6□□□□□ -1.03
CCDC38-202ENST00000546386 MED14OSP0DP75 135 aa8.6□□□□□ -1.03
CCDC38-202ENST00000546386 POLR2KP53803 58 aaKnown RBP8.6□□□□□ -1.03
CCDC38-202ENST00000546386 MPV17L2Q567V2 206 aa8.6□□□□□ -1.03
CCDC38-202ENST00000546386 DNLZQ5SXM8 178 aa8.6□□□□□ -1.03
CCDC38-202ENST00000546386 PRIMA1Q86XR5 153 aa8.6□□□□□ -1.03
CCDC38-202ENST00000546386 OR4C5Q8NGB2 326 aa8.6□□□□□ -1.03
CCDC38-202ENST00000546386 RNASE8Q8TDE3 154 aaKnown RBP8.6□□□□□ -1.03
CCDC38-202ENST00000546386 LAMTOR2Q9Y2Q5 125 aa8.6□□□□□ -1.03
CCDC38-202ENST00000546386 CSMD3Q7Z407 3707 aa8.59□□□□□ -1.03
CCDC38-202ENST00000546386 ZNRF2Q8NHG8 242 aa8.59□□□□□ -1.03
CCDC38-202ENST00000546386 CITED1Q99966 193 aa8.59□□□□□ -1.03
CCDC38-202ENST00000546386 UQCR10Q9UDW1 63 aa8.59□□□□□ -1.03
CCDC38-202ENST00000546386 TNFRSF18Q9Y5U5 241 aa8.59□□□□□ -1.03
CCDC38-202ENST00000546386 TRAV2A0A0B4J234 112 aa8.58□□□□□ -1.04
CCDC38-202ENST00000546386 HHLA3Q9XRX5 114 aa8.58□□□□□ -1.04
CCDC38-202ENST00000546386 COL7A1Q02388 2944 aa8.58□□□□□ -1.04
CCDC38-202ENST00000546386 GAGE12JA6NER3 117 aa8.58□□□□□ -1.04
CCDC38-202ENST00000546386 A8MTW9 85 aa8.58□□□□□ -1.04
CCDC38-202ENST00000546386 K7EP13 123 aa8.58□□□□□ -1.04
CCDC38-202ENST00000546386 G0S2P27469 103 aa8.58□□□□□ -1.04
CCDC38-202ENST00000546386 GAGE1Q13065 139 aa8.58□□□□□ -1.04
CCDC38-202ENST00000546386 GAGE4Q13068 117 aa8.58□□□□□ -1.04
CCDC38-202ENST00000546386 GAGE5Q13069 117 aa8.58□□□□□ -1.04
CCDC38-202ENST00000546386 GAGE13Q4V321 117 aa8.58□□□□□ -1.04
CCDC38-202ENST00000546386 BAALCQ8WXS3 180 aa8.58□□□□□ -1.04
CCDC38-202ENST00000546386 C20orf78Q9BR46 151 aa8.58□□□□□ -1.04
CCDC38-202ENST00000546386 VCYO14598 125 aa8.57□□□□□ -1.04
CCDC38-202ENST00000546386 CSNK1G2-AS1Q8NCQ2 148 aa8.57□□□□□ -1.04
CCDC38-202ENST00000546386 IGKCP01834 107 aa8.57□□□□□ -1.04
CCDC38-202ENST00000546386 RRN3P1Q2M238 152 aa8.57□□□□□ -1.04
CCDC38-202ENST00000546386 ORMDL2Q53FV1 153 aa8.57□□□□□ -1.04
CCDC38-202ENST00000546386 NEXN-AS1Q8NBZ9 246 aa8.57□□□□□ -1.04
CCDC38-202ENST00000546386 TOMM6Q96B49 74 aa8.57□□□□□ -1.04
CCDC38-202ENST00000546386 PLAC8L1A1L4L8 177 aa8.56□□□□□ -1.04
CCDC38-202ENST00000546386 M0R143 59 aa8.56□□□□□ -1.04
CCDC38-202ENST00000546386 C3orf56Q8N813 242 aa8.56□□□□□ -1.04
CCDC38-202ENST00000546386 SLC25A29Q8N8R3 303 aa8.56□□□□□ -1.04
CCDC38-202ENST00000546386 NAA38Q9BRA0 125 aaKnown RBP8.56□□□□□ -1.04
CCDC38-202ENST00000546386 FOSL1P15407 271 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms