RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 TEX48A0A1B0GUV7 120 aa4.86□□□□□ -1.63
CCDC60-205ENST00000546345 NCBP2LA6PVI3 153 aaKnown RBP4.86□□□□□ -1.63
CCDC60-205ENST00000546345 TCRAP04437 139 aa4.86□□□□□ -1.63
CCDC60-205ENST00000546345 SLC25A5P05141 298 aaKnown RBP4.86□□□□□ -1.63
CCDC60-205ENST00000546345 CGB3P0DN86 165 aa4.86□□□□□ -1.63
CCDC60-205ENST00000546345 CGB7P0DN87 165 aa4.86□□□□□ -1.63
CCDC60-205ENST00000546345 RNASE2P10153 161 aaKnown RBP4.86□□□□□ -1.63
CCDC60-205ENST00000546345 CRYBA4P53673 196 aa4.86□□□□□ -1.63
CCDC60-205ENST00000546345 SMAGPQ0VAQ4 97 aa4.86□□□□□ -1.63
CCDC60-205ENST00000546345 PDE6HQ13956 83 aa4.86□□□□□ -1.63
CCDC60-205ENST00000546345 CEND1Q8N111 149 aa4.86□□□□□ -1.63
CCDC60-205ENST00000546345 FXYD5Q96DB9 178 aa4.86□□□□□ -1.63
CCDC60-205ENST00000546345 SRSF8Q9BRL6 282 aaKnown RBP4.86□□□□□ -1.63
CCDC60-205ENST00000546345 GEMIN7Q9H840 131 aaKnown RBP4.86□□□□□ -1.63
CCDC60-205ENST00000546345 DNAH5Q8TE73 4624 aa4.86□□□□□ -1.63
CCDC60-205ENST00000546345 IGHV3-11P01762 117 aa4.85□□□□□ -1.63
CCDC60-205ENST00000546345 CRYGCP07315 174 aa4.85□□□□□ -1.63
CCDC60-205ENST00000546345 DEFA4P12838 97 aa4.85□□□□□ -1.63
CCDC60-205ENST00000546345 PLNP26678 52 aa4.85□□□□□ -1.63
CCDC60-205ENST00000546345 GAGE5Q13069 117 aa4.85□□□□□ -1.63
CCDC60-205ENST00000546345 GAGE6Q13070 117 aa4.85□□□□□ -1.63
CCDC60-205ENST00000546345 C9orf47Q6ZRZ4 202 aa4.85□□□□□ -1.63
CCDC60-205ENST00000546345 TMEM116Q8NCL8 245 aa4.85□□□□□ -1.63
CCDC60-205ENST00000546345 ZNF479Q96JC4 524 aa4.85□□□□□ -1.63
CCDC60-205ENST00000546345 LINC01600Q96MT4 127 aa4.85□□□□□ -1.63
CCDC60-205ENST00000546345 C1QTNF4Q9BXJ3 329 aa4.85□□□□□ -1.63
CCDC60-205ENST00000546345 NDUFA4L2Q9NRX3 87 aa4.85□□□□□ -1.63
CCDC60-205ENST00000546345 ERG28Q9UKR5 140 aa4.85□□□□□ -1.63
CCDC60-205ENST00000546345 IGHV7-81A0A0B4J1V7 117 aa4.84□□□□□ -1.63
CCDC60-205ENST00000546345 TRAV41A0A0B4J266 112 aa4.84□□□□□ -1.63
CCDC60-205ENST00000546345 KBTBD11-OT1A0A1B0GTJ5 212 aa4.84□□□□□ -1.63
CCDC60-205ENST00000546345 PGPA6NDG6 321 aa4.84□□□□□ -1.63
CCDC60-205ENST00000546345 CNIH1O95406 144 aa4.84□□□□□ -1.63
CCDC60-205ENST00000546345 CSN3P07498 182 aa4.84□□□□□ -1.63
CCDC60-205ENST00000546345 RBMY1FQ15415 496 aaKnown RBP4.84□□□□□ -1.63
CCDC60-205ENST00000546345 MRPL23Q16540 153 aaKnown RBP4.84□□□□□ -1.63
CCDC60-205ENST00000546345 FAM104BQ5XKR9 115 aa4.84□□□□□ -1.63
CCDC60-205ENST00000546345 Q86TA4 180 aa4.84□□□□□ -1.63
CCDC60-205ENST00000546345 OR13A1Q8NGR1 328 aa4.84□□□□□ -1.63
CCDC60-205ENST00000546345 TMEM167AQ8TBQ9 72 aa4.84□□□□□ -1.63
CCDC60-205ENST00000546345 PPDPFLQ8WWR9 84 aa4.84□□□□□ -1.63
CCDC60-205ENST00000546345 GTSF1LQ9H1H1 148 aa4.84□□□□□ -1.63
CCDC60-205ENST00000546345 THYN1Q9P016 225 aa4.84□□□□□ -1.63
CCDC60-205ENST00000546345 IGKV1OR2-108A0A075B7D4 117 aa4.83□□□□□ -1.64
CCDC60-205ENST00000546345 IGLL5B9A064 214 aa4.83□□□□□ -1.64
CCDC60-205ENST00000546345 DPM2O94777 84 aa4.83□□□□□ -1.64
CCDC60-205ENST00000546345 APOMO95445 188 aa4.83□□□□□ -1.64
CCDC60-205ENST00000546345 MOSP00540 346 aa4.83□□□□□ -1.64
CCDC60-205ENST00000546345 CA1P00915 261 aaPredicted RBP4.83□□□□□ -1.64
CCDC60-205ENST00000546345 IGKCP01834 107 aa4.83□□□□□ -1.64
CCDC60-205ENST00000546345 FCER1GP30273 86 aa4.83□□□□□ -1.64
CCDC60-205ENST00000546345 CRIP2P52943 208 aaPredicted RBP4.83□□□□□ -1.64
CCDC60-205ENST00000546345 PAPPA-AS1Q5QFB9 102 aa4.83□□□□□ -1.64
CCDC60-205ENST00000546345 LINC00305Q7Z4B0 112 aa4.83□□□□□ -1.64
CCDC60-205ENST00000546345 MOB3BQ86TA1 216 aa4.83□□□□□ -1.64
CCDC60-205ENST00000546345 FLYWCH2Q96CP2 140 aaKnown RBP4.83□□□□□ -1.64
CCDC60-205ENST00000546345 PGLYRP4Q96LB8 373 aa4.83□□□□□ -1.64
CCDC60-205ENST00000546345 PRELID3AQ96N28 172 aa4.83□□□□□ -1.64
CCDC60-205ENST00000546345 RASL11BQ9BPW5 248 aa4.83□□□□□ -1.64
CCDC60-205ENST00000546345 CHAC1Q9BUX1 264 aa4.83□□□□□ -1.64
CCDC60-205ENST00000546345 CNFNQ9BYD5 112 aa4.83□□□□□ -1.64
CCDC60-205ENST00000546345 MAP1LC3AQ9H492 121 aa4.83□□□□□ -1.64
CCDC60-205ENST00000546345 CALYQ9NYX4 217 aa4.83□□□□□ -1.64
CCDC60-205ENST00000546345 APLNQ9ULZ1 77 aa4.83□□□□□ -1.64
CCDC60-205ENST00000546345 TRAV26-1A0A087WT03 109 aa4.82□□□□□ -1.64
CCDC60-205ENST00000546345 TRAV12-1A0A0B4J245 112 aa4.82□□□□□ -1.64
CCDC60-205ENST00000546345 SCGB2A1O75556 95 aa4.82□□□□□ -1.64
CCDC60-205ENST00000546345 EDN2P20800 178 aa4.82□□□□□ -1.64
CCDC60-205ENST00000546345 ECSCRQ19T08 205 aa4.82□□□□□ -1.64
CCDC60-205ENST00000546345 RRN3P1Q2M238 152 aa4.82□□□□□ -1.64
CCDC60-205ENST00000546345 ZNF833PQ6ZTB9 187 aa4.82□□□□□ -1.64
CCDC60-205ENST00000546345 LINC00311Q8N616 119 aa4.82□□□□□ -1.64
CCDC60-205ENST00000546345 SPAG8Q99932 426 aaPredicted RBP4.82□□□□□ -1.64
CCDC60-205ENST00000546345 Q9H3A6 140 aa4.82□□□□□ -1.64
CCDC60-205ENST00000546345 TRBV25-1A0A075B6N4 114 aa4.81□□□□□ -1.64
CCDC60-205ENST00000546345 TRBV12-3P01733 135 aa4.81□□□□□ -1.64
CCDC60-205ENST00000546345 IL4P05112 153 aa4.81□□□□□ -1.64
CCDC60-205ENST00000546345 SPINK8P0C7L1 97 aa4.81□□□□□ -1.64
CCDC60-205ENST00000546345 SAA2P0DJI9 122 aaPredicted RBP4.81□□□□□ -1.64
CCDC60-205ENST00000546345 ZNF137PP52743 207 aa4.81□□□□□ -1.64
CCDC60-205ENST00000546345 SYNJ2BPP57105 145 aa4.81□□□□□ -1.64
CCDC60-205ENST00000546345 CACNG7P62955 275 aa4.81□□□□□ -1.64
CCDC60-205ENST00000546345 DEFB135Q30KP9 77 aa4.81□□□□□ -1.64
CCDC60-205ENST00000546345 VMA21Q3ZAQ7 101 aa4.81□□□□□ -1.64
CCDC60-205ENST00000546345 SPINK9Q5DT21 86 aa4.81□□□□□ -1.64
CCDC60-205ENST00000546345 TEN1Q86WV5 123 aa4.81□□□□□ -1.64
CCDC60-205ENST00000546345 AMN1Q8IY45 258 aa4.81□□□□□ -1.64
CCDC60-205ENST00000546345 RNF183Q96D59 192 aa4.81□□□□□ -1.64
CCDC60-205ENST00000546345 RNF5Q99942 180 aa4.81□□□□□ -1.64
CCDC60-205ENST00000546345 TMEM126AQ9H061 195 aa4.81□□□□□ -1.64
CCDC60-205ENST00000546345 HHLA3Q9XRX5 114 aa4.81□□□□□ -1.64
CCDC60-205ENST00000546345 HIGD1AQ9Y241 93 aa4.81□□□□□ -1.64
CCDC60-205ENST00000546345 A0A096LNJ9 63 aa4.8□□□□□ -1.64
CCDC60-205ENST00000546345 PPP1R17O96001 155 aa4.8□□□□□ -1.64
CCDC60-205ENST00000546345 FCGR2BP31994 310 aaPredicted RBP4.8□□□□□ -1.64
CCDC60-205ENST00000546345 NMUP48645 174 aa4.8□□□□□ -1.64
CCDC60-205ENST00000546345 NANOS2P60321 138 aaKnown RBP4.8□□□□□ -1.64
CCDC60-205ENST00000546345 C12orf74Q32Q52 190 aa4.8□□□□□ -1.64
CCDC60-205ENST00000546345 CFAP126Q5VTH2 177 aa4.8□□□□□ -1.64
CCDC60-205ENST00000546345 PATE2Q6UY27 113 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms