RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, human

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-223	ENST00000545215	LYPD6B	Q8NI32	183 aa		4.72	□□□□□ -1.65
LDHA-223	ENST00000545215	FXYD5	Q96DB9	178 aa		4.72	□□□□□ -1.65
LDHA-223	ENST00000545215	C11orf68	Q9H3H3	251 aa	Known RBP	4.72	□□□□□ -1.65
LDHA-223	ENST00000545215	MANBAL	Q9NQG1	85 aa		4.72	□□□□□ -1.65
LDHA-223	ENST00000545215	ZNF331	Q9NQX6	463 aa	Predicted RBP	4.72	□□□□□ -1.65
LDHA-223	ENST00000545215	OTOR	Q9NRC9	128 aa		4.72	□□□□□ -1.65
LDHA-223	ENST00000545215	MRPS16	Q9Y3D3	137 aa	Known RBP	4.72	□□□□□ -1.65
LDHA-223	ENST00000545215	RFNG	Q9Y644	331 aa		4.72	□□□□□ -1.65
LDHA-223	ENST00000545215	TNXB	P22105	4242 aa		4.72	□□□□□ -1.65
LDHA-223	ENST00000545215	IGKV3-7	A0A075B6H7	116 aa		4.72	□□□□□ -1.65
LDHA-223	ENST00000545215		H3BQ15	152 aa		4.72	□□□□□ -1.65
LDHA-223	ENST00000545215	DUSP14	O95147	198 aa	Known RBP	4.72	□□□□□ -1.65
LDHA-223	ENST00000545215	PYY	P10082	97 aa		4.72	□□□□□ -1.65
LDHA-223	ENST00000545215	TFPI2	P48307	235 aa		4.72	□□□□□ -1.65
LDHA-223	ENST00000545215	EBLN2	Q6P2I7	272 aa		4.72	□□□□□ -1.65
LDHA-223	ENST00000545215	FOXI2	Q6ZQN5	318 aa		4.72	□□□□□ -1.65
LDHA-223	ENST00000545215	BOD1L2	Q8IYS8	172 aa		4.72	□□□□□ -1.65
LDHA-223	ENST00000545215	CMTM2	Q8TAZ6	248 aa		4.72	□□□□□ -1.65
LDHA-223	ENST00000545215	GEMIN7	Q9H840	131 aa	Known RBP	4.72	□□□□□ -1.65
LDHA-223	ENST00000545215	TRAV10	A0A0B4J240	114 aa		4.71	□□□□□ -1.66
LDHA-223	ENST00000545215	RBAKDN	A6NC62	111 aa		4.71	□□□□□ -1.66
LDHA-223	ENST00000545215	PRAC2	D3DTV9	90 aa		4.71	□□□□□ -1.66
LDHA-223	ENST00000545215	HMGB3	O15347	200 aa	Known RBP	4.71	□□□□□ -1.66
LDHA-223	ENST00000545215	TSHB	P01222	138 aa		4.71	□□□□□ -1.66
LDHA-223	ENST00000545215	SLC25A5	P05141	298 aa	Known RBP	4.71	□□□□□ -1.66
LDHA-223	ENST00000545215	ZNF688	P0C7X2	276 aa		4.71	□□□□□ -1.66
LDHA-223	ENST00000545215	RPL35A	P18077	110 aa	Known RBP	4.71	□□□□□ -1.66
LDHA-223	ENST00000545215	KRTAP10-1	P60331	282 aa		4.71	□□□□□ -1.66
LDHA-223	ENST00000545215	PSMG4	Q5JS54	123 aa		4.71	□□□□□ -1.66
LDHA-223	ENST00000545215	UBE2DNL	Q8IWF7	75 aa		4.71	□□□□□ -1.66
LDHA-223	ENST00000545215	C5orf17	Q8NAS9	161 aa		4.71	□□□□□ -1.66
LDHA-223	ENST00000545215	OR10J6P	Q8NGY7	276 aa		4.71	□□□□□ -1.66
LDHA-223	ENST00000545215	KIR2DL5B	Q8NHK3	375 aa		4.71	□□□□□ -1.66
LDHA-223	ENST00000545215	BLNK	Q8WV28	456 aa		4.71	□□□□□ -1.66
LDHA-223	ENST00000545215	TVP23C	Q96ET8	276 aa		4.71	□□□□□ -1.66
LDHA-223	ENST00000545215	NIPSNAP3B	Q9BS92	247 aa		4.71	□□□□□ -1.66
LDHA-223	ENST00000545215	EIF5A2	Q9GZV4	153 aa	Known RBP	4.71	□□□□□ -1.66
LDHA-223	ENST00000545215		Q9H3A6	140 aa		4.71	□□□□□ -1.66
LDHA-223	ENST00000545215	TRAV8-2	A0A0B4J237	113 aa		4.7	□□□□□ -1.66
LDHA-223	ENST00000545215	CXCL1	P09341	107 aa		4.7	□□□□□ -1.66
LDHA-223	ENST00000545215	AZU1	P20160	251 aa		4.7	□□□□□ -1.66
LDHA-223	ENST00000545215	GNG4	P50150	75 aa		4.7	□□□□□ -1.66
LDHA-223	ENST00000545215	DEFB131A	P59861	70 aa		4.7	□□□□□ -1.66
LDHA-223	ENST00000545215	KRTAP5-3	Q6L8H2	238 aa		4.7	□□□□□ -1.66
LDHA-223	ENST00000545215	MORN3	Q6PF18	240 aa	Predicted RBP	4.7	□□□□□ -1.66
LDHA-223	ENST00000545215	STPG4	Q8N801	248 aa		4.7	□□□□□ -1.66
LDHA-223	ENST00000545215	FER1L6-AS1	Q8NA97	138 aa		4.7	□□□□□ -1.66
LDHA-223	ENST00000545215		A0A0J9YX75	114 aa		4.69	□□□□□ -1.66
LDHA-223	ENST00000545215		A0A0U1RRA0	63 aa		4.69	□□□□□ -1.66
LDHA-223	ENST00000545215	PGP	A6NDG6	321 aa		4.69	□□□□□ -1.66
LDHA-223	ENST00000545215		F8WDY8	70 aa		4.69	□□□□□ -1.66
LDHA-223	ENST00000545215	MT1HL1	P0DM35	61 aa		4.69	□□□□□ -1.66
LDHA-223	ENST00000545215	BCL2	P10415	239 aa		4.69	□□□□□ -1.66
LDHA-223	ENST00000545215	HLA-DRB4	P13762	266 aa		4.69	□□□□□ -1.66
LDHA-223	ENST00000545215	TSPO	P30536	169 aa		4.69	□□□□□ -1.66
LDHA-223	ENST00000545215	TMEM78	Q5T7P6	136 aa		4.69	□□□□□ -1.66
LDHA-223	ENST00000545215		Q6ZN92	141 aa		4.69	□□□□□ -1.66
LDHA-223	ENST00000545215	NFE4	Q86UQ8	179 aa		4.69	□□□□□ -1.66
LDHA-223	ENST00000545215	OR8A1	Q8NGG7	326 aa		4.69	□□□□□ -1.66
LDHA-223	ENST00000545215	LINC00477	Q96M19	166 aa		4.69	□□□□□ -1.66
LDHA-223	ENST00000545215	ODF3	Q96PU9	254 aa		4.69	□□□□□ -1.66
LDHA-223	ENST00000545215	C1QTNF4	Q9BXJ3	329 aa		4.69	□□□□□ -1.66
LDHA-223	ENST00000545215	MRPL16	Q9NX20	251 aa	Known RBP	4.69	□□□□□ -1.66
LDHA-223	ENST00000545215	GNG13	Q9P2W3	67 aa		4.69	□□□□□ -1.66
LDHA-223	ENST00000545215	EPDR1	Q9UM22	224 aa		4.69	□□□□□ -1.66
LDHA-223	ENST00000545215	LENEP	Q9Y5L5	61 aa		4.69	□□□□□ -1.66
LDHA-223	ENST00000545215	HLA-DRB4	X5D2U9	266 aa		4.69	□□□□□ -1.66
LDHA-223	ENST00000545215		A8MTW9	85 aa		4.68	□□□□□ -1.66
LDHA-223	ENST00000545215	GGTLC3	B5MD39	225 aa		4.68	□□□□□ -1.66
LDHA-223	ENST00000545215	TMEM250	H0YL14	139 aa		4.68	□□□□□ -1.66
LDHA-223	ENST00000545215		H3BMM0	161 aa		4.68	□□□□□ -1.66
LDHA-223	ENST00000545215		H3BTX0	84 aa		4.68	□□□□□ -1.66
LDHA-223	ENST00000545215		H7BYZ3	331 aa		4.68	□□□□□ -1.66
LDHA-223	ENST00000545215	TCRA	P04437	139 aa		4.68	□□□□□ -1.66
LDHA-223	ENST00000545215	RPL32	P62910	135 aa	Known RBP	4.68	□□□□□ -1.66
LDHA-223	ENST00000545215	HAMP	P81172	84 aa		4.68	□□□□□ -1.66
LDHA-223	ENST00000545215	MEF2B	Q02080	365 aa	Predicted RBP	4.68	□□□□□ -1.66
LDHA-223	ENST00000545215	ACTL10	Q5JWF8	245 aa		4.68	□□□□□ -1.66
LDHA-223	ENST00000545215	FA2H	Q7L5A8	372 aa		4.68	□□□□□ -1.66
LDHA-223	ENST00000545215	TRPT1	Q86TN4	253 aa	Known RBP	4.68	□□□□□ -1.66
LDHA-223	ENST00000545215	APRG1	Q8IVJ8	170 aa		4.68	□□□□□ -1.66
LDHA-223	ENST00000545215	EXOC3-AS1	Q8N2X6	119 aa		4.68	□□□□□ -1.66
LDHA-223	ENST00000545215	RNF182	Q8N6D2	247 aa		4.68	□□□□□ -1.66
LDHA-223	ENST00000545215	CYB561D1	Q8N8Q1	229 aa		4.68	□□□□□ -1.66
LDHA-223	ENST00000545215	C15orf53	Q8NAA6	179 aa		4.68	□□□□□ -1.66
LDHA-223	ENST00000545215	OR5A1	Q8NGJ0	315 aa		4.68	□□□□□ -1.66
LDHA-223	ENST00000545215	PTH2	Q96A98	100 aa		4.68	□□□□□ -1.66
LDHA-223	ENST00000545215	NDFIP1	Q9BT67	221 aa		4.68	□□□□□ -1.66
LDHA-223	ENST00000545215	TRBV6-1	A0A0K0K1D8	114 aa		4.67	□□□□□ -1.66
LDHA-223	ENST00000545215	NBDY	A0A0U1RRE5	68 aa		4.67	□□□□□ -1.66
LDHA-223	ENST00000545215		A0A1B0GV50	99 aa		4.67	□□□□□ -1.66
LDHA-223	ENST00000545215	RBFOX3	A6NFN3	312 aa		4.67	□□□□□ -1.66
LDHA-223	ENST00000545215	SNURFL	B1AK76	121 aa		4.67	□□□□□ -1.66
LDHA-223	ENST00000545215		M0R3E3	92 aa		4.67	□□□□□ -1.66
LDHA-223	ENST00000545215	PEX7	O00628	323 aa		4.67	□□□□□ -1.66
LDHA-223	ENST00000545215	LEP	P41159	167 aa		4.67	□□□□□ -1.66
LDHA-223	ENST00000545215	ZNF138	P52744	262 aa		4.67	□□□□□ -1.66
LDHA-223	ENST00000545215	CCL20	P78556	96 aa		4.67	□□□□□ -1.66
LDHA-223	ENST00000545215	HIST1H1A	Q02539	215 aa	Predicted RBP	4.67	□□□□□ -1.66
LDHA-223	ENST00000545215	SRSF9	Q13242	221 aa	Known RBP eCLIP	4.67	□□□□□ -1.66

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