RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 AKAP9Q99996 3911 aa11.85□□□□□ -0.51
SCNN1A-221ENST00000543768 M0QY20 66 aa11.85□□□□□ -0.51
SCNN1A-221ENST00000543768 TSHBP01222 138 aa11.85□□□□□ -0.51
SCNN1A-221ENST00000543768 TMEM61Q8N0U2 210 aa11.85□□□□□ -0.51
SCNN1A-221ENST00000543768 TMEM86BQ8N661 226 aa11.85□□□□□ -0.51
SCNN1A-221ENST00000543768 PEMTQ9UBM1 199 aa11.85□□□□□ -0.51
SCNN1A-221ENST00000543768 CYSLTR1Q9Y271 337 aa11.85□□□□□ -0.51
SCNN1A-221ENST00000543768 ITPR3Q14573 2671 aa11.84□□□□□ -0.51
SCNN1A-221ENST00000543768 TRBV27A0A0K0K1C4 114 aa11.84□□□□□ -0.51
SCNN1A-221ENST00000543768 H3BMM0 161 aa11.84□□□□□ -0.51
SCNN1A-221ENST00000543768 Q6ZSV7 163 aa11.84□□□□□ -0.51
SCNN1A-221ENST00000543768 CEND1Q8N111 149 aa11.84□□□□□ -0.51
SCNN1A-221ENST00000543768 TLN2Q9Y4G6 2542 aa11.84□□□□□ -0.51
SCNN1A-221ENST00000543768 TRAV2A0A0B4J234 112 aa11.84□□□□□ -0.51
SCNN1A-221ENST00000543768 IGIPA6NJ69 53 aa11.84□□□□□ -0.51
SCNN1A-221ENST00000543768 ZNF876PQ49A33 203 aa11.84□□□□□ -0.51
SCNN1A-221ENST00000543768 KHDC1LQ5JSQ8 128 aa11.84□□□□□ -0.51
SCNN1A-221ENST00000543768 KIR2DL4Q99706 377 aa11.84□□□□□ -0.51
SCNN1A-221ENST00000543768 SPAG8Q99932 426 aaPredicted RBP11.84□□□□□ -0.51
SCNN1A-221ENST00000543768 TP53TG1Q9Y2A0 90 aa11.84□□□□□ -0.51
SCNN1A-221ENST00000543768 TRGV11A0A075B6L2 103 aa11.83□□□□□ -0.52
SCNN1A-221ENST00000543768 RBMY1BA6NDE4 496 aaKnown RBP11.83□□□□□ -0.52
SCNN1A-221ENST00000543768 RBMY1EA6NEQ0 496 aaKnown RBP11.83□□□□□ -0.52
SCNN1A-221ENST00000543768 IGLL5B9A064 214 aa11.83□□□□□ -0.52
SCNN1A-221ENST00000543768 RBMY1DP0C7P1 496 aaKnown RBP11.83□□□□□ -0.52
SCNN1A-221ENST00000543768 ZNF56Q15929 161 aa11.83□□□□□ -0.52
SCNN1A-221ENST00000543768 KLHL30-AS1Q8NEE0 82 aa11.83□□□□□ -0.52
SCNN1A-221ENST00000543768 MYO9AB2RTY4 2548 aa11.83□□□□□ -0.52
SCNN1A-221ENST00000543768 RPL39P62891 51 aaKnown RBP11.83□□□□□ -0.52
SCNN1A-221ENST00000543768 CKS1BP61024 79 aa11.82□□□□□ -0.52
SCNN1A-221ENST00000543768 HIST2H2BCQ6DN03 193 aa11.82□□□□□ -0.52
SCNN1A-221ENST00000543768 ZNF256Q9Y2P7 627 aaPredicted RBP11.82□□□□□ -0.52
SCNN1A-221ENST00000543768 LINC01549A6NIU2 74 aa11.82□□□□□ -0.52
SCNN1A-221ENST00000543768 SCGB2A2Q13296 93 aa11.82□□□□□ -0.52
SCNN1A-221ENST00000543768 ZNF479Q96JC4 524 aa11.82□□□□□ -0.52
SCNN1A-221ENST00000543768 ETDBQ3ZM63 59 aa11.81□□□□□ -0.52
SCNN1A-221ENST00000543768 SH2D6Q7Z4S9 175 aa11.81□□□□□ -0.52
SCNN1A-221ENST00000543768 DNAJC9-AS1A6NH13 148 aa11.81□□□□□ -0.52
SCNN1A-221ENST00000543768 DEFB114Q30KQ6 69 aa11.81□□□□□ -0.52
SCNN1A-221ENST00000543768 TRPT1Q86TN4 253 aaKnown RBP11.8□□□□□ -0.52
SCNN1A-221ENST00000543768 MAP6D1Q9H9H5 199 aa11.8□□□□□ -0.52
SCNN1A-221ENST00000543768 SONP18583 2426 aaKnown RBP11.8□□□□□ -0.52
SCNN1A-221ENST00000543768 H3BMG7 143 aa11.79□□□□□ -0.52
SCNN1A-221ENST00000543768 HTN1P15515 57 aa11.79□□□□□ -0.52
SCNN1A-221ENST00000543768 TIMM17AQ99595 171 aa11.79□□□□□ -0.52
SCNN1A-221ENST00000543768 IGLV4-69A0A075B6H9 119 aa11.79□□□□□ -0.52
SCNN1A-221ENST00000543768 OR11H12B2RN74 326 aa11.79□□□□□ -0.52
SCNN1A-221ENST00000543768 PRM2P04554 102 aa11.79□□□□□ -0.52
SCNN1A-221ENST00000543768 TAL2Q16559 108 aa11.79□□□□□ -0.52
SCNN1A-221ENST00000543768 TEX29Q8N6K0 151 aa11.79□□□□□ -0.52
SCNN1A-221ENST00000543768 OR11H2Q8NH07 326 aa11.79□□□□□ -0.52
SCNN1A-221ENST00000543768 DYNLRB2Q8TF09 96 aa11.79□□□□□ -0.52
SCNN1A-221ENST00000543768 TMEM141Q96I45 108 aa11.79□□□□□ -0.52
SCNN1A-221ENST00000543768 ESM1Q9NQ30 184 aa11.79□□□□□ -0.52
SCNN1A-221ENST00000543768 TENM4Q6N022 2769 aa11.78□□□□□ -0.52
SCNN1A-221ENST00000543768 CUBNO60494 3623 aa11.78□□□□□ -0.52
SCNN1A-221ENST00000543768 PMVKQ15126 192 aa11.78□□□□□ -0.52
SCNN1A-221ENST00000543768 C12orf74Q32Q52 190 aa11.78□□□□□ -0.52
SCNN1A-221ENST00000543768 GAGE13Q4V321 117 aa11.78□□□□□ -0.52
SCNN1A-221ENST00000543768 MYMXA0A1B0GTQ4 84 aa11.77□□□□□ -0.52
SCNN1A-221ENST00000543768 PRO0461Q9UI25 63 aa11.77□□□□□ -0.52
SCNN1A-221ENST00000543768 C11orf86A6NJI1 115 aa11.77□□□□□ -0.53
SCNN1A-221ENST00000543768 P0DMU3 169 aa11.77□□□□□ -0.53
SCNN1A-221ENST00000543768 FAM231AP0DMU4 169 aa11.77□□□□□ -0.53
SCNN1A-221ENST00000543768 FAM231CP0DMU5 169 aa11.77□□□□□ -0.53
SCNN1A-221ENST00000543768 NSUN5P1Q3KNT7 163 aa11.77□□□□□ -0.53
SCNN1A-221ENST00000543768 RAX2Q96IS3 184 aa11.77□□□□□ -0.53
SCNN1A-221ENST00000543768 RHOHQ15669 191 aa11.76□□□□□ -0.53
SCNN1A-221ENST00000543768 PRADC1Q9BSG0 188 aa11.76□□□□□ -0.53
SCNN1A-221ENST00000543768 NACAE9PAV3 2078 aa11.76□□□□□ -0.53
SCNN1A-221ENST00000543768 TRAV26-1A0A087WT03 109 aa11.76□□□□□ -0.53
SCNN1A-221ENST00000543768 EMP1P54849 157 aa11.76□□□□□ -0.53
SCNN1A-221ENST00000543768 FLNAP21333 2647 aaKnown RBP11.75□□□□□ -0.53
SCNN1A-221ENST00000543768 KRTAP1-1Q07627 177 aa11.75□□□□□ -0.53
SCNN1A-221ENST00000543768 C11orf44Q8N8P7 122 aa11.75□□□□□ -0.53
SCNN1A-221ENST00000543768 EDA2RQ9HAV5 297 aa11.75□□□□□ -0.53
SCNN1A-221ENST00000543768 PDZD2O15018 2839 aa11.75□□□□□ -0.53
SCNN1A-221ENST00000543768 INSL3P51460 131 aa11.75□□□□□ -0.53
SCNN1A-221ENST00000543768 PROK1P58294 105 aa11.75□□□□□ -0.53
SCNN1A-221ENST00000543768 RRN3P1Q2M238 152 aa11.75□□□□□ -0.53
SCNN1A-221ENST00000543768 CHD6Q8TD26 2715 aa11.74□□□□□ -0.53
SCNN1A-221ENST00000543768 TRBV7-3A0A075B6L6 115 aa11.74□□□□□ -0.53
SCNN1A-221ENST00000543768 I3L3M4 83 aa11.74□□□□□ -0.53
SCNN1A-221ENST00000543768 FHL3Q13643 280 aa11.74□□□□□ -0.53
SCNN1A-221ENST00000543768 PAPPA-AS1Q5QFB9 102 aa11.74□□□□□ -0.53
SCNN1A-221ENST00000543768 NF1P21359 2839 aa11.74□□□□□ -0.53
SCNN1A-221ENST00000543768 CCDC168Q8NDH2 2452 aa11.74□□□□□ -0.53
SCNN1A-221ENST00000543768 IGHV3-73A0A0B4J1V6 119 aa11.74□□□□□ -0.53
SCNN1A-221ENST00000543768 M0R2P5 195 aa11.74□□□□□ -0.53
SCNN1A-221ENST00000543768 CRYBA4P53673 196 aa11.74□□□□□ -0.53
SCNN1A-221ENST00000543768 CD28P10747 220 aa11.73□□□□□ -0.53
SCNN1A-221ENST00000543768 MTURNQ8N3F0 131 aa11.73□□□□□ -0.53
SCNN1A-221ENST00000543768 C20orf203Q8NBC4 194 aa11.73□□□□□ -0.53
SCNN1A-221ENST00000543768 HIST1H4GQ99525 98 aa11.73□□□□□ -0.53
SCNN1A-221ENST00000543768 GEMIN7Q9H840 131 aaKnown RBP11.73□□□□□ -0.53
SCNN1A-221ENST00000543768 MRPL16Q9NX20 251 aaKnown RBP11.73□□□□□ -0.53
SCNN1A-221ENST00000543768 KMT2BQ9UMN6 2715 aaPredicted RBP11.73□□□□□ -0.53
SCNN1A-221ENST00000543768 A0A1W2PRX2 142 aa11.72□□□□□ -0.53
SCNN1A-221ENST00000543768 PIK3CD-AS1Q5SR53 167 aa11.72□□□□□ -0.53
SCNN1A-221ENST00000543768 ZNRF2Q8NHG8 242 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms