RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 F5H697 171 aa8.7□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 DEFB4AO15263 64 aa8.7□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 ATP5G1P05496 136 aa8.7□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 SRIP30626 198 aa8.7□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 OR10J3Q5JRS4 329 aa8.7□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 SUMO4Q6EEV6 95 aa8.7□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 ZNF479Q96JC4 524 aa8.7□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 PRELID3AQ96N28 172 aa8.7□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 CELA1Q9UNI1 258 aa8.7□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 A0A0J9YWU9 116 aa8.69□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 TRBV6-5A0A0K0K1A5 114 aa8.69□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 M0QY20 66 aa8.69□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 GATA1P15976 413 aaPredicted RBP8.69□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 DNAJC30Q96LL9 226 aa8.69□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 C20orf78Q9BR46 151 aa8.69□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 TRGV4A0A0C4DH28 118 aa8.68□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 PRSS47A8MTI9 375 aa8.68□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 K7EQD1 137 aa8.68□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 HIST1H2BKO60814 126 aa8.68□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 HIST1H2BJP06899 126 aa8.68□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 HIST1H2BOP23527 126 aa8.68□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 HIST1H2BBP33778 126 aa8.68□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 HIST1H2BDP58876 126 aa8.68□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 HIST1H2BCP62807 126 aa8.68□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 RPL32P62910 135 aaKnown RBP8.68□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 Q0VG73 95 aa8.68□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 FHL2Q14192 279 aa8.68□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 RHOHQ15669 191 aa8.68□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 HIST2H2BEQ16778 126 aa8.68□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 KIAA1644Q3SXP7 199 aa8.68□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.68□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 NRACQ8N912 160 aa8.68□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 C11orf45Q8TAV5 145 aa8.68□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 HIST1H2BHQ93079 126 aa8.68□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 HIST1H2BNQ99877 126 aa8.68□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 HIST1H2BMQ99879 126 aa8.68□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 NIT2Q9NQR4 276 aa8.68□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 TRAV26-2A0A0B4J265 109 aa8.67□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 TNFRSF6BO95407 300 aa8.67□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 C12orf74Q32Q52 190 aa8.67□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 C18orf32Q8TCD1 76 aa8.67□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 MAP1LC3AQ9H492 121 aa8.67□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 PRO0255Q9UI72 69 aa8.67□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 IGHV3-73A0A0B4J1V6 119 aa8.66□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 K7EMI3 77 aa8.66□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 NCR2O95944 276 aa8.66□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 NPYP01303 97 aa8.66□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 SUMO2P61956 95 aaKnown RBP8.66□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 COA6Q5JTJ3 125 aaKnown RBP8.66□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 PRADC1Q9BSG0 188 aa8.66□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 DYNC1H1Q14204 4646 aaKnown RBP8.66□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 SMKR1H3BMG3 65 aa8.65□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 H3BNG1 76 aa8.65□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 TCAPO15273 167 aa8.65□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 SLC25A29Q8N8R3 303 aa8.65□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 LINC00476Q8WZB0 136 aa8.65□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 ST20Q9HBF5 79 aa8.65□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 NXT2Q9NPJ8 142 aaKnown RBP8.65□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 HHLA3Q9XRX5 114 aa8.65□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 TRBV7-3A0A075B6L6 115 aa8.64□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 PMCHP20382 165 aa8.64□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 HOXA5P20719 270 aa8.64□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 CRYBA4P53673 196 aa8.64□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 RPL36AP83881 106 aaKnown RBP8.64□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 Q6ZSN1 163 aa8.64□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 RPL36ALQ969Q0 106 aaKnown RBP8.64□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 RPL39LQ96EH5 51 aaKnown RBP8.64□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 SMIM2Q9BVW6 85 aa8.64□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 TNFRSF18Q9Y5U5 241 aa8.64□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 TRBV27A0A0K0K1C4 114 aa8.63□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 SDHAF1A6NFY7 115 aa8.63□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 LINC01546A6NGU7 62 aa8.63□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 GAS8-AS1O95177 125 aa8.63□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 S100A6P06703 90 aa8.63□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 POLR2KP53803 58 aaKnown RBP8.63□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 Q6ZTC4 211 aa8.63□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 BAGE3Q86Y29 109 aa8.63□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 NEXN-AS1Q8NBZ9 246 aa8.63□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 CHCHD1Q96BP2 118 aaKnown RBP8.63□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 TMEM70Q9BUB7 260 aa8.63□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 DNAH11Q96DT5 4516 aa8.62□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 DMBT1Q9UGM3 2413 aaPredicted RBP8.62□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 TRAV10A0A0B4J240 114 aa8.62□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 F5H768 121 aa8.62□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 VCYO14598 125 aa8.62□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 LINC00694P0DN24 101 aa8.62□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 SH2D6Q7Z4S9 175 aa8.62□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 DAZ4Q86SG3 579 aaKnown RBP8.62□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 Q8N8P6 123 aa8.62□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 DAZ3Q9NR90 486 aaKnown RBP8.62□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 VPS13DQ5THJ4 4388 aa8.62□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 IGLV2-18A0A075B6J9 118 aa8.61□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 TRAV26-1A0A087WT03 109 aa8.61□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 I3L3M4 83 aa8.61□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 PAX4O43316 350 aa8.61□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 ESDP10768 282 aa8.61□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 NANOS2P60321 138 aaKnown RBP8.61□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 FA2HQ7L5A8 372 aa8.61□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 PRSS3P2Q8NHM4 247 aa8.61□□□□□ -1.03
CACNA1C-IT3-201ENST00000542680 KIR2DL4Q99706 377 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms