RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 NEGR1Q7Z3B1 354 aa4.83□□□□□ -1.64
PTPRO-208ENST00000542557 OR5A1Q8NGJ0 315 aa4.83□□□□□ -1.64
PTPRO-208ENST00000542557 PHLDA1Q8WV24 401 aaPredicted RBP4.83□□□□□ -1.64
PTPRO-208ENST00000542557 C4orf3Q8WVX3 66 aa4.83□□□□□ -1.64
PTPRO-208ENST00000542557 CST9LQ9H4G1 147 aa4.83□□□□□ -1.64
PTPRO-208ENST00000542557 LRRK2Q5S007 2527 aa4.83□□□□□ -1.64
PTPRO-208ENST00000542557 IGLV4-69A0A075B6H9 119 aa4.83□□□□□ -1.64
PTPRO-208ENST00000542557 TRBV7-3A0A075B6L6 115 aa4.83□□□□□ -1.64
PTPRO-208ENST00000542557 GAGE12BA1L429 117 aa4.83□□□□□ -1.64
PTPRO-208ENST00000542557 RBX1P62877 108 aa4.83□□□□□ -1.64
PTPRO-208ENST00000542557 ZNF56Q15929 161 aa4.83□□□□□ -1.64
PTPRO-208ENST00000542557 KRTAP1-3Q8IUG1 177 aa4.83□□□□□ -1.64
PTPRO-208ENST00000542557 TEX29Q8N6K0 151 aa4.83□□□□□ -1.64
PTPRO-208ENST00000542557 ZANQ9Y493 2812 aa4.83□□□□□ -1.64
PTPRO-208ENST00000542557 USP17L23D6RBM5 183 aa4.83□□□□□ -1.64
PTPRO-208ENST00000542557 SLURP1P55000 103 aa4.83□□□□□ -1.64
PTPRO-208ENST00000542557 PIK3CD-AS1Q5SR53 167 aa4.83□□□□□ -1.64
PTPRO-208ENST00000542557 FAM74A4Q5TZK3 123 aa4.83□□□□□ -1.64
PTPRO-208ENST00000542557 RAB37Q96AX2 223 aa4.83□□□□□ -1.64
PTPRO-208ENST00000542557 Q96MF0 132 aa4.83□□□□□ -1.64
PTPRO-208ENST00000542557 PRADC1Q9BSG0 188 aa4.83□□□□□ -1.64
PTPRO-208ENST00000542557 A0A1B0GWB2 263 aa4.82□□□□□ -1.64
PTPRO-208ENST00000542557 FABP2P12104 132 aa4.82□□□□□ -1.64
PTPRO-208ENST00000542557 HERVK_113P61574 105 aa4.82□□□□□ -1.64
PTPRO-208ENST00000542557 C6orf226Q5I0X4 101 aa4.82□□□□□ -1.64
PTPRO-208ENST00000542557 SPCS1Q9Y6A9 102 aa4.82□□□□□ -1.64
PTPRO-208ENST00000542557 FAM208BQ5VWN6 2430 aa4.82□□□□□ -1.64
PTPRO-208ENST00000542557 CREBBPQ92793 2442 aa4.82□□□□□ -1.64
PTPRO-208ENST00000542557 H3BMM0 161 aa4.82□□□□□ -1.64
PTPRO-208ENST00000542557 RS1O15537 224 aa4.82□□□□□ -1.64
PTPRO-208ENST00000542557 RBMY1A1P0DJD3 496 aaKnown RBP4.82□□□□□ -1.64
PTPRO-208ENST00000542557 RBMY1CP0DJD4 496 aa4.82□□□□□ -1.64
PTPRO-208ENST00000542557 RBMY1FQ15415 496 aaKnown RBP4.82□□□□□ -1.64
PTPRO-208ENST00000542557 ZNF876PQ49A33 203 aa4.82□□□□□ -1.64
PTPRO-208ENST00000542557 OCIAD2Q56VL3 154 aa4.82□□□□□ -1.64
PTPRO-208ENST00000542557 C18orf65Q6ZTR6 163 aa4.82□□□□□ -1.64
PTPRO-208ENST00000542557 PTH2Q96A98 100 aa4.82□□□□□ -1.64
PTPRO-208ENST00000542557 NHP2Q9NX24 153 aaKnown RBP4.82□□□□□ -1.64
PTPRO-208ENST00000542557 ZFYVE26Q68DK2 2539 aa4.82□□□□□ -1.64
PTPRO-208ENST00000542557 POLQO75417 2590 aa4.81□□□□□ -1.64
PTPRO-208ENST00000542557 C11orf86A6NJI1 115 aa4.81□□□□□ -1.64
PTPRO-208ENST00000542557 DEFB131AP59861 70 aa4.81□□□□□ -1.64
PTPRO-208ENST00000542557 RPL39P62891 51 aaKnown RBP4.81□□□□□ -1.64
PTPRO-208ENST00000542557 DEFB136Q30KP8 78 aa4.81□□□□□ -1.64
PTPRO-208ENST00000542557 HIST1H4GQ99525 98 aa4.81□□□□□ -1.64
PTPRO-208ENST00000542557 LINC00467Q9BRT7 94 aa4.81□□□□□ -1.64
PTPRO-208ENST00000542557 MXRA5Q9NR99 2828 aa4.81□□□□□ -1.64
PTPRO-208ENST00000542557 PTPN13Q12923 2485 aa4.81□□□□□ -1.64
PTPRO-208ENST00000542557 NAV2Q8IVL1 2488 aa4.81□□□□□ -1.64
PTPRO-208ENST00000542557 KNCNA6PVL3 124 aa4.81□□□□□ -1.64
PTPRO-208ENST00000542557 RBMY1BA6NDE4 496 aaKnown RBP4.8□□□□□ -1.64
PTPRO-208ENST00000542557 RBMY1EA6NEQ0 496 aaKnown RBP4.8□□□□□ -1.64
PTPRO-208ENST00000542557 ZNF815PA8K554 130 aa4.8□□□□□ -1.64
PTPRO-208ENST00000542557 I3L3M4 83 aa4.8□□□□□ -1.64
PTPRO-208ENST00000542557 K7ERJ3 54 aa4.8□□□□□ -1.64
PTPRO-208ENST00000542557 RBMY1DP0C7P1 496 aaKnown RBP4.8□□□□□ -1.64
PTPRO-208ENST00000542557 C12orf74Q32Q52 190 aa4.8□□□□□ -1.64
PTPRO-208ENST00000542557 NFE4Q86UQ8 179 aa4.8□□□□□ -1.64
PTPRO-208ENST00000542557 TMEM61Q8N0U2 210 aa4.8□□□□□ -1.64
PTPRO-208ENST00000542557 C11orf44Q8N8P7 122 aa4.8□□□□□ -1.64
PTPRO-208ENST00000542557 C20orf203Q8NBC4 194 aa4.8□□□□□ -1.64
PTPRO-208ENST00000542557 NAA38Q9BRA0 125 aaKnown RBP4.8□□□□□ -1.64
PTPRO-208ENST00000542557 CSDC2Q9Y534 153 aaKnown RBP4.8□□□□□ -1.64
PTPRO-208ENST00000542557 A8MWV9 139 aa4.8□□□□□ -1.64
PTPRO-208ENST00000542557 K7ERU9 68 aa4.8□□□□□ -1.64
PTPRO-208ENST00000542557 ZNF415Q09FC8 603 aa4.8□□□□□ -1.64
PTPRO-208ENST00000542557 MAP6D1Q9H9H5 199 aa4.8□□□□□ -1.64
PTPRO-208ENST00000542557 CENPEQ02224 2701 aa4.8□□□□□ -1.64
PTPRO-208ENST00000542557 AGRNO00468 2067 aa4.8□□□□□ -1.64
PTPRO-208ENST00000542557 IGLL5B9A064 214 aa4.79□□□□□ -1.64
PTPRO-208ENST00000542557 M0R2P5 195 aa4.79□□□□□ -1.64
PTPRO-208ENST00000542557 P0DMU3 169 aa4.79□□□□□ -1.64
PTPRO-208ENST00000542557 FAM231AP0DMU4 169 aa4.79□□□□□ -1.64
PTPRO-208ENST00000542557 FAM231CP0DMU5 169 aa4.79□□□□□ -1.64
PTPRO-208ENST00000542557 KLHL30-AS1Q8NEE0 82 aa4.79□□□□□ -1.64
PTPRO-208ENST00000542557 DYNLRB2Q8TF09 96 aa4.79□□□□□ -1.64
PTPRO-208ENST00000542557 DOPEY2Q9Y3R5 2298 aa4.79□□□□□ -1.64
PTPRO-208ENST00000542557 DEFB114Q30KQ6 69 aa4.79□□□□□ -1.64
PTPRO-208ENST00000542557 CD300EQ496F6 205 aaPredicted RBP4.79□□□□□ -1.64
PTPRO-208ENST00000542557 DLX4Q92988 240 aaPredicted RBP4.79□□□□□ -1.64
PTPRO-208ENST00000542557 CRYBA4P53673 196 aa4.79□□□□□ -1.64
PTPRO-208ENST00000542557 RRN3P1Q2M238 152 aa4.79□□□□□ -1.64
PTPRO-208ENST00000542557 SCGB1D4Q6XE38 83 aa4.79□□□□□ -1.64
PTPRO-208ENST00000542557 Q6ZSV7 163 aa4.79□□□□□ -1.64
PTPRO-208ENST00000542557 ZNRF2Q8NHG8 242 aa4.79□□□□□ -1.64
PTPRO-208ENST00000542557 DUX3Q96PT4 197 aa4.79□□□□□ -1.64
PTPRO-208ENST00000542557 SPANXB1Q9NS25 103 aaPredicted RBP4.79□□□□□ -1.64
PTPRO-208ENST00000542557 PYGO1Q9Y3Y4 419 aa4.79□□□□□ -1.64
PTPRO-208ENST00000542557 RHODO00212 210 aa4.78□□□□□ -1.64
PTPRO-208ENST00000542557 IGLV4-3A0A075B6K6 122 aa4.78□□□□□ -1.64
PTPRO-208ENST00000542557 A0A0J9YY99 117 aa4.78□□□□□ -1.64
PTPRO-208ENST00000542557 INSP01308 110 aa4.78□□□□□ -1.64
PTPRO-208ENST00000542557 VPREB1P12018 145 aa4.78□□□□□ -1.64
PTPRO-208ENST00000542557 STHQ8IWL8 128 aa4.78□□□□□ -1.64
PTPRO-208ENST00000542557 PLEKHB2Q96CS7 222 aa4.78□□□□□ -1.64
PTPRO-208ENST00000542557 TSSC4Q9Y5U2 329 aaPredicted RBP4.78□□□□□ -1.64
PTPRO-208ENST00000542557 ABCA12Q86UK0 2595 aa4.78□□□□□ -1.64
PTPRO-208ENST00000542557 DNAJC9-AS1A6NH13 148 aa4.77□□□□□ -1.65
PTPRO-208ENST00000542557 UBE2D1P51668 147 aa4.77□□□□□ -1.65
PTPRO-208ENST00000542557 EMP1P54849 157 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms