RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 LOC100131303A0A0U1RQF7 123 aa6.54□□□□□ -1.36
DDX55-208ENST00000541259 NCR2O95944 276 aa6.54□□□□□ -1.36
DDX55-208ENST00000541259 CRYBA4P53673 196 aa6.54□□□□□ -1.36
DDX55-208ENST00000541259 KIAA1644Q3SXP7 199 aa6.54□□□□□ -1.36
DDX55-208ENST00000541259 PHLDA1Q8WV24 401 aaPredicted RBP6.54□□□□□ -1.36
DDX55-208ENST00000541259 VSIG2Q96IQ7 327 aa6.54□□□□□ -1.36
DDX55-208ENST00000541259 GNB1LQ9BYB4 327 aa6.54□□□□□ -1.36
DDX55-208ENST00000541259 HHLA3Q9XRX5 114 aa6.54□□□□□ -1.36
DDX55-208ENST00000541259 TRAV26-1A0A087WT03 109 aa6.53□□□□□ -1.36
DDX55-208ENST00000541259 TRAV10A0A0B4J240 114 aa6.53□□□□□ -1.36
DDX55-208ENST00000541259 M0QY20 66 aa6.53□□□□□ -1.36
DDX55-208ENST00000541259 CIDEAO60543 219 aa6.53□□□□□ -1.36
DDX55-208ENST00000541259 APCSP02743 223 aa6.53□□□□□ -1.36
DDX55-208ENST00000541259 RAB5AP20339 215 aa6.53□□□□□ -1.36
DDX55-208ENST00000541259 RPS10P46783 165 aaKnown RBP6.53□□□□□ -1.36
DDX55-208ENST00000541259 RPL39LQ96EH5 51 aaKnown RBP6.53□□□□□ -1.36
DDX55-208ENST00000541259 PRO0255Q9UI72 69 aa6.53□□□□□ -1.36
DDX55-208ENST00000541259 TRAPPC1Q9Y5R8 145 aa6.53□□□□□ -1.36
DDX55-208ENST00000541259 TRBV6-4A0A1B0GX49 114 aa6.52□□□□□ -1.37
DDX55-208ENST00000541259 D6R8Y8 96 aa6.52□□□□□ -1.37
DDX55-208ENST00000541259 K7EQD1 137 aa6.52□□□□□ -1.37
DDX55-208ENST00000541259 HLA-DQA1P01909 254 aa6.52□□□□□ -1.37
DDX55-208ENST00000541259 CKS2P33552 79 aa6.52□□□□□ -1.37
DDX55-208ENST00000541259 FABP9Q0Z7S8 132 aa6.52□□□□□ -1.37
DDX55-208ENST00000541259 COX19Q49B96 90 aa6.52□□□□□ -1.37
DDX55-208ENST00000541259 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.52□□□□□ -1.37
DDX55-208ENST00000541259 NEXN-AS1Q8NBZ9 246 aa6.52□□□□□ -1.37
DDX55-208ENST00000541259 FRZBQ92765 325 aa6.52□□□□□ -1.37
DDX55-208ENST00000541259 LOC100996750A0A140TA64 210 aa6.51□□□□□ -1.37
DDX55-208ENST00000541259 MT-ND6P03923 174 aa6.51□□□□□ -1.37
DDX55-208ENST00000541259 GYPEP15421 78 aa6.51□□□□□ -1.37
DDX55-208ENST00000541259 NRACQ8N912 160 aa6.51□□□□□ -1.37
DDX55-208ENST00000541259 MRAP2Q96G30 205 aa6.51□□□□□ -1.37
DDX55-208ENST00000541259 KRTAP4-6Q9BYQ5 205 aa6.51□□□□□ -1.37
DDX55-208ENST00000541259 GAGE12JA6NER3 117 aa6.5□□□□□ -1.37
DDX55-208ENST00000541259 IGLL5B9A064 214 aa6.5□□□□□ -1.37
DDX55-208ENST00000541259 PHOX2AO14813 284 aa6.5□□□□□ -1.37
DDX55-208ENST00000541259 NPYP01303 97 aa6.5□□□□□ -1.37
DDX55-208ENST00000541259 TRGC2P03986 189 aa6.5□□□□□ -1.37
DDX55-208ENST00000541259 GAGE1Q13065 139 aa6.5□□□□□ -1.37
DDX55-208ENST00000541259 GAGE4Q13068 117 aa6.5□□□□□ -1.37
DDX55-208ENST00000541259 GAGE5Q13069 117 aa6.5□□□□□ -1.37
DDX55-208ENST00000541259 RHOHQ15669 191 aa6.5□□□□□ -1.37
DDX55-208ENST00000541259 GAGE13Q4V321 117 aa6.5□□□□□ -1.37
DDX55-208ENST00000541259 OR10J3Q5JRS4 329 aa6.5□□□□□ -1.37
DDX55-208ENST00000541259 ZFAND6Q6FIF0 208 aa6.5□□□□□ -1.37
DDX55-208ENST00000541259 CEMP1Q6PRD7 247 aaPredicted RBP6.5□□□□□ -1.37
DDX55-208ENST00000541259 ZNRF2Q8NHG8 242 aa6.5□□□□□ -1.37
DDX55-208ENST00000541259 PRELID3AQ96N28 172 aa6.5□□□□□ -1.37
DDX55-208ENST00000541259 WWC2-AS2Q96NR7 200 aa6.5□□□□□ -1.37
DDX55-208ENST00000541259 PRADC1Q9BSG0 188 aa6.5□□□□□ -1.37
DDX55-208ENST00000541259 NIT2Q9NQR4 276 aa6.5□□□□□ -1.37
DDX55-208ENST00000541259 PLA2G2DQ9UNK4 145 aa6.5□□□□□ -1.37
DDX55-208ENST00000541259 VPS13DQ5THJ4 4388 aa6.5□□□□□ -1.37
DDX55-208ENST00000541259 TENM2Q9NT68 2774 aa6.5□□□□□ -1.37
DDX55-208ENST00000541259 A0A096LPF7 62 aa6.49□□□□□ -1.37
DDX55-208ENST00000541259 H7C1H1 209 aa6.49□□□□□ -1.37
DDX55-208ENST00000541259 TNFRSF6BO95407 300 aa6.49□□□□□ -1.37
DDX55-208ENST00000541259 NUDT3O95989 172 aa6.49□□□□□ -1.37
DDX55-208ENST00000541259 ORMDL3Q8N138 153 aa6.49□□□□□ -1.37
DDX55-208ENST00000541259 MUC7Q8TAX7 377 aa6.49□□□□□ -1.37
DDX55-208ENST00000541259 DEFB104AQ8WTQ1 72 aa6.49□□□□□ -1.37
DDX55-208ENST00000541259 ALKBH7Q9BT30 221 aaPredicted RBP6.49□□□□□ -1.37
DDX55-208ENST00000541259 LYSTQ99698 3801 aa6.49□□□□□ -1.37
DDX55-208ENST00000541259 IGHV3-38A0A0C4DH36 116 aa6.48□□□□□ -1.37
DDX55-208ENST00000541259 TRBV10-1A0A0K0K1A3 114 aa6.48□□□□□ -1.37
DDX55-208ENST00000541259 PPBPP02775 128 aa6.48□□□□□ -1.37
DDX55-208ENST00000541259 LINC00694P0DN24 101 aa6.48□□□□□ -1.37
DDX55-208ENST00000541259 SRIP30626 198 aa6.48□□□□□ -1.37
DDX55-208ENST00000541259 UBE2D3P61077 147 aa6.48□□□□□ -1.37
DDX55-208ENST00000541259 UBE2D2P62837 147 aa6.48□□□□□ -1.37
DDX55-208ENST00000541259 NEGR1Q7Z3B1 354 aa6.48□□□□□ -1.37
DDX55-208ENST00000541259 TNFRSF18Q9Y5U5 241 aa6.48□□□□□ -1.37
DDX55-208ENST00000541259 DNAH1Q9P2D7 4330 aa6.47□□□□□ -1.37
DDX55-208ENST00000541259 TRBV7-3A0A075B6L6 115 aa6.47□□□□□ -1.37
DDX55-208ENST00000541259 TRBV6-5A0A0K0K1A5 114 aa6.47□□□□□ -1.37
DDX55-208ENST00000541259 LOC389332A0A1B0GUA5 103 aa6.47□□□□□ -1.37
DDX55-208ENST00000541259 SDHAF1A6NFY7 115 aa6.47□□□□□ -1.37
DDX55-208ENST00000541259 H3BNG1 76 aa6.47□□□□□ -1.37
DDX55-208ENST00000541259 POLR2KP53803 58 aaKnown RBP6.47□□□□□ -1.37
DDX55-208ENST00000541259 RPL36AP83881 106 aaKnown RBP6.47□□□□□ -1.37
DDX55-208ENST00000541259 IQCJQ1A5X6 159 aa6.47□□□□□ -1.37
DDX55-208ENST00000541259 RPL36ALQ969Q0 106 aaKnown RBP6.47□□□□□ -1.37
DDX55-208ENST00000541259 DNAJC30Q96LL9 226 aa6.47□□□□□ -1.37
DDX55-208ENST00000541259 ST20Q9HBF5 79 aa6.47□□□□□ -1.37
DDX55-208ENST00000541259 APLNQ9ULZ1 77 aa6.47□□□□□ -1.37
DDX55-208ENST00000541259 ICOSQ9Y6W8 199 aa6.47□□□□□ -1.37
DDX55-208ENST00000541259 NUPR2A6NF83 97 aa6.46□□□□□ -1.38
DDX55-208ENST00000541259 SUMO2P61956 95 aaKnown RBP6.46□□□□□ -1.38
DDX55-208ENST00000541259 MRPL23Q16540 153 aaKnown RBP6.46□□□□□ -1.38
DDX55-208ENST00000541259 ATP6V0E2Q8NHE4 81 aa6.46□□□□□ -1.38
DDX55-208ENST00000541259 TMEM70Q9BUB7 260 aa6.46□□□□□ -1.38
DDX55-208ENST00000541259 ALMS1Q8TCU4 4167 aa6.46□□□□□ -1.38
DDX55-208ENST00000541259 PPP1R17O96001 155 aa6.45□□□□□ -1.38
DDX55-208ENST00000541259 PMCHP20382 165 aa6.45□□□□□ -1.38
DDX55-208ENST00000541259 C15orf53Q8NAA6 179 aa6.45□□□□□ -1.38
DDX55-208ENST00000541259 C18orf32Q8TCD1 76 aa6.45□□□□□ -1.38
DDX55-208ENST00000541259 C20orf78Q9BR46 151 aa6.45□□□□□ -1.38
DDX55-208ENST00000541259 LAMTOR2Q9Y2Q5 125 aa6.45□□□□□ -1.38
DDX55-208ENST00000541259 KLK5Q9Y337 293 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms