RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 DPM2O94777 84 aa10.13□□□□□ -0.79
RTN3-210ENST00000540798 HIST2H2BDQ6DRA6 164 aa10.13□□□□□ -0.79
RTN3-210ENST00000540798 YAE1D1Q9NRH1 226 aa10.13□□□□□ -0.79
RTN3-210ENST00000540798 MYO9AB2RTY4 2548 aa10.12□□□□□ -0.79
RTN3-210ENST00000540798 A0A087WWL8 130 aa10.12□□□□□ -0.79
RTN3-210ENST00000540798 TRAV25A0A0B4J276 109 aa10.12□□□□□ -0.79
RTN3-210ENST00000540798 SIVA1O15304 175 aa10.12□□□□□ -0.79
RTN3-210ENST00000540798 C12orf54Q6X4T0 127 aa10.12□□□□□ -0.79
RTN3-210ENST00000540798 DYNLRB2Q8TF09 96 aa10.12□□□□□ -0.79
RTN3-210ENST00000540798 SPAG8Q99932 426 aaPredicted RBP10.12□□□□□ -0.79
RTN3-210ENST00000540798 CD28P10747 220 aa10.12□□□□□ -0.79
RTN3-210ENST00000540798 CD300EQ496F6 205 aaPredicted RBP10.12□□□□□ -0.79
RTN3-210ENST00000540798 LINC00467Q9BRT7 94 aa10.12□□□□□ -0.79
RTN3-210ENST00000540798 TLN2Q9Y4G6 2542 aa10.12□□□□□ -0.79
RTN3-210ENST00000540798 K7EP34 96 aa10.11□□□□□ -0.79
RTN3-210ENST00000540798 TMEM160Q9NX00 188 aa10.11□□□□□ -0.79
RTN3-210ENST00000540798 SCGB1A1P11684 91 aa10.11□□□□□ -0.79
RTN3-210ENST00000540798 MORN3Q6PF18 240 aaPredicted RBP10.11□□□□□ -0.79
RTN3-210ENST00000540798 MTURNQ8N3F0 131 aa10.11□□□□□ -0.79
RTN3-210ENST00000540798 MRPL35Q9NZE8 188 aaKnown RBP10.11□□□□□ -0.79
RTN3-210ENST00000540798 NEXN-AS1Q8NBZ9 246 aa10.11□□□□□ -0.79
RTN3-210ENST00000540798 LINC01006Q8NI28 216 aa10.11□□□□□ -0.79
RTN3-210ENST00000540798 EDA2RQ9HAV5 297 aa10.11□□□□□ -0.79
RTN3-210ENST00000540798 TRBV27A0A0K0K1C4 114 aa10.1□□□□□ -0.79
RTN3-210ENST00000540798 M0QY20 66 aa10.1□□□□□ -0.79
RTN3-210ENST00000540798 C2orf66Q6UXQ4 117 aa10.1□□□□□ -0.79
RTN3-210ENST00000540798 PTH2Q96A98 100 aa10.1□□□□□ -0.79
RTN3-210ENST00000540798 SCGB3A1Q96QR1 104 aa10.1□□□□□ -0.79
RTN3-210ENST00000540798 SPCS1Q9Y6A9 102 aa10.1□□□□□ -0.79
RTN3-210ENST00000540798 CCL24O00175 119 aa10.09□□□□□ -0.79
RTN3-210ENST00000540798 PIK3CD-AS1Q5SR53 167 aa10.09□□□□□ -0.79
RTN3-210ENST00000540798 RNF183Q96D59 192 aa10.09□□□□□ -0.79
RTN3-210ENST00000540798 IGKV2D-26A0A0A0MRZ7 120 aa10.09□□□□□ -0.79
RTN3-210ENST00000540798 LINC01549A6NIU2 74 aa10.09□□□□□ -0.79
RTN3-210ENST00000540798 VCYO14598 125 aa10.09□□□□□ -0.79
RTN3-210ENST00000540798 PLNP26678 52 aa10.09□□□□□ -0.79
RTN3-210ENST00000540798 PCP2Q8IVA1 136 aa10.09□□□□□ -0.79
RTN3-210ENST00000540798 F8VRH5 84 aa10.08□□□□□ -0.8
RTN3-210ENST00000540798 H7C1H1 209 aa10.08□□□□□ -0.8
RTN3-210ENST00000540798 ZNF876PQ49A33 203 aa10.08□□□□□ -0.8
RTN3-210ENST00000540798 ZFP2Q6ZN57 461 aa10.08□□□□□ -0.8
RTN3-210ENST00000540798 SMIM20Q8N5G0 67 aa10.08□□□□□ -0.8
RTN3-210ENST00000540798 BAALCQ8WXS3 180 aa10.08□□□□□ -0.8
RTN3-210ENST00000540798 CITED2Q99967 270 aaPredicted RBP10.08□□□□□ -0.8
RTN3-210ENST00000540798 SORL1Q92673 2214 aa10.08□□□□□ -0.8
RTN3-210ENST00000540798 NF1P21359 2839 aa10.08□□□□□ -0.8
RTN3-210ENST00000540798 SONP18583 2426 aaKnown RBP10.08□□□□□ -0.8
RTN3-210ENST00000540798 INSL3P51460 131 aa10.08□□□□□ -0.8
RTN3-210ENST00000540798 ODF3L2Q3SX64 289 aa10.08□□□□□ -0.8
RTN3-210ENST00000540798 CCDC168Q8NDH2 2452 aa10.07□□□□□ -0.8
RTN3-210ENST00000540798 SDHAF1A6NFY7 115 aa10.07□□□□□ -0.8
RTN3-210ENST00000540798 HILS1P60008 231 aa10.07□□□□□ -0.8
RTN3-210ENST00000540798 ZC2HC1BQ5TFG8 222 aa10.07□□□□□ -0.8
RTN3-210ENST00000540798 SH2D6Q7Z4S9 175 aa10.07□□□□□ -0.8
RTN3-210ENST00000540798 C9orf118A6NHY6 69 aa10.07□□□□□ -0.8
RTN3-210ENST00000540798 F5H697 171 aa10.07□□□□□ -0.8
RTN3-210ENST00000540798 NMUP48645 174 aa10.07□□□□□ -0.8
RTN3-210ENST00000540798 FAM74A4Q5TZK3 123 aa10.07□□□□□ -0.8
RTN3-210ENST00000540798 TRPT1Q86TN4 253 aaKnown RBP10.07□□□□□ -0.8
RTN3-210ENST00000540798 IGIPA6NJ69 53 aa10.07□□□□□ -0.8
RTN3-210ENST00000540798 TMEM97Q5BJF2 176 aa10.07□□□□□ -0.8
RTN3-210ENST00000540798 B5MCH6 92 aa10.06□□□□□ -0.8
RTN3-210ENST00000540798 ZNF56Q15929 161 aa10.06□□□□□ -0.8
RTN3-210ENST00000540798 CYSLTR1Q9Y271 337 aa10.06□□□□□ -0.8
RTN3-210ENST00000540798 A0A1W2PRX2 142 aa10.06□□□□□ -0.8
RTN3-210ENST00000540798 NDUFA7O95182 113 aa10.06□□□□□ -0.8
RTN3-210ENST00000540798 TSHBP01222 138 aa10.06□□□□□ -0.8
RTN3-210ENST00000540798 GTSCR1Q86UQ5 136 aa10.06□□□□□ -0.8
RTN3-210ENST00000540798 C11orf44Q8N8P7 122 aa10.06□□□□□ -0.8
RTN3-210ENST00000540798 KIR2DL4Q99706 377 aa10.06□□□□□ -0.8
RTN3-210ENST00000540798 HIGD1BQ9P298 99 aa10.06□□□□□ -0.8
RTN3-210ENST00000540798 TSPAN13O95857 204 aa10.05□□□□□ -0.8
RTN3-210ENST00000540798 C11orf72Q8NBR9 251 aa10.05□□□□□ -0.8
RTN3-210ENST00000540798 M0R2P5 195 aa10.05□□□□□ -0.8
RTN3-210ENST00000540798 SEC11AP67812 179 aa10.05□□□□□ -0.8
RTN3-210ENST00000540798 WFDC2Q14508 124 aa10.05□□□□□ -0.8
RTN3-210ENST00000540798 NSUN5P1Q3KNT7 163 aa10.05□□□□□ -0.8
RTN3-210ENST00000540798 TIMM17AQ99595 171 aa10.05□□□□□ -0.8
RTN3-210ENST00000540798 TP53TG1Q9Y2A0 90 aa10.05□□□□□ -0.8
RTN3-210ENST00000540798 ADARB2-AS1A8MUL3 147 aa10.04□□□□□ -0.8
RTN3-210ENST00000540798 ZNF415Q09FC8 603 aa10.04□□□□□ -0.8
RTN3-210ENST00000540798 NACAE9PAV3 2078 aa10.04□□□□□ -0.8
RTN3-210ENST00000540798 INSP01308 110 aa10.04□□□□□ -0.8
RTN3-210ENST00000540798 RHOHQ15669 191 aa10.04□□□□□ -0.8
RTN3-210ENST00000540798 ZNF418Q8TF45 676 aaPredicted RBP10.04□□□□□ -0.8
RTN3-210ENST00000540798 TMEM141Q96I45 108 aa10.04□□□□□ -0.8
RTN3-210ENST00000540798 PRSS29PA6NIE9 313 aa10.03□□□□□ -0.8
RTN3-210ENST00000540798 ETDBQ3ZM63 59 aa10.03□□□□□ -0.8
RTN3-210ENST00000540798 A8MWV9 139 aa10.02□□□□□ -0.8
RTN3-210ENST00000540798 BEAN1Q3B7T3 259 aa10.02□□□□□ -0.8
RTN3-210ENST00000540798 PRM2P04554 102 aa10.02□□□□□ -0.81
RTN3-210ENST00000540798 PROK1P58294 105 aa10.02□□□□□ -0.81
RTN3-210ENST00000540798 CITED1Q99966 193 aa10.02□□□□□ -0.81
RTN3-210ENST00000540798 A0A1W2PPM0 123 aa10.02□□□□□ -0.81
RTN3-210ENST00000540798 RPL39P62891 51 aaKnown RBP10.02□□□□□ -0.81
RTN3-210ENST00000540798 IL17DQ8TAD2 202 aa10.02□□□□□ -0.81
RTN3-210ENST00000540798 TTTY13Q9BZ97 58 aa10.02□□□□□ -0.81
RTN3-210ENST00000540798 SPXQ9BT56 116 aa10.01□□□□□ -0.81
RTN3-210ENST00000540798 IGLV4-69A0A075B6H9 119 aa10.01□□□□□ -0.81
RTN3-210ENST00000540798 P0DMU3 169 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms