RNA–Protein interactions for RNA: ENST00000540590.1

LMO3-223, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-223ENST00000540590 PRELID3AQ96N28 172 aa8.81□□□□□ -1
LMO3-223ENST00000540590 ALKBH7Q9BT30 221 aaPredicted RBP8.81□□□□□ -1
LMO3-223ENST00000540590 PRO0255Q9UI72 69 aa8.81□□□□□ -1
LMO3-223ENST00000540590 COL7A1Q02388 2944 aa8.81□□□□□ -1
LMO3-223ENST00000540590 C1orf196B1AJZ1 125 aa8.8□□□□□ -1
LMO3-223ENST00000540590 M0QY20 66 aa8.8□□□□□ -1
LMO3-223ENST00000540590 NPYP01303 97 aa8.8□□□□□ -1
LMO3-223ENST00000540590 RPL32P62910 135 aaKnown RBP8.8□□□□□ -1
LMO3-223ENST00000540590 Q6ZTC4 211 aa8.8□□□□□ -1
LMO3-223ENST00000540590 NRACQ8N912 160 aa8.8□□□□□ -1
LMO3-223ENST00000540590 RPL39LQ96EH5 51 aaKnown RBP8.8□□□□□ -1
LMO3-223ENST00000540590 C20orf78Q9BR46 151 aa8.8□□□□□ -1
LMO3-223ENST00000540590 HUWE1Q7Z6Z7 4374 aaKnown RBP8.8□□□□□ -1
LMO3-223ENST00000540590 FBN3Q75N90 2809 aa8.8□□□□□ -1
LMO3-223ENST00000540590 TRBV6-5A0A0K0K1A5 114 aa8.79□□□□□ -1
LMO3-223ENST00000540590 K7EQD1 137 aa8.79□□□□□ -1
LMO3-223ENST00000540590 TCAPO15273 167 aa8.79□□□□□ -1
LMO3-223ENST00000540590 P0DMU3 169 aa8.79□□□□□ -1
LMO3-223ENST00000540590 FAM231AP0DMU4 169 aa8.79□□□□□ -1
LMO3-223ENST00000540590 FAM231CP0DMU5 169 aa8.79□□□□□ -1
LMO3-223ENST00000540590 HTN3P15516 51 aa8.79□□□□□ -1
LMO3-223ENST00000540590 SH2D6Q7Z4S9 175 aa8.79□□□□□ -1
LMO3-223ENST00000540590 PRADC1Q9BSG0 188 aa8.79□□□□□ -1
LMO3-223ENST00000540590 TRAV10A0A0B4J240 114 aa8.78□□□□□ -1
LMO3-223ENST00000540590 PRSS47A8MTI9 375 aa8.78□□□□□ -1
LMO3-223ENST00000540590 F5H768 121 aa8.78□□□□□ -1
LMO3-223ENST00000540590 K7EMI3 77 aa8.78□□□□□ -1
LMO3-223ENST00000540590 HIST1H2BKO60814 126 aa8.78□□□□□ -1
LMO3-223ENST00000540590 TNFRSF6BO95407 300 aa8.78□□□□□ -1
LMO3-223ENST00000540590 HIST1H2BJP06899 126 aa8.78□□□□□ -1
LMO3-223ENST00000540590 HIST1H2BOP23527 126 aa8.78□□□□□ -1
LMO3-223ENST00000540590 HIST1H2BBP33778 126 aa8.78□□□□□ -1
LMO3-223ENST00000540590 HIST1H2BDP58876 126 aa8.78□□□□□ -1
LMO3-223ENST00000540590 HIST1H2BCP62807 126 aa8.78□□□□□ -1
LMO3-223ENST00000540590 HIST2H2BEQ16778 126 aa8.78□□□□□ -1
LMO3-223ENST00000540590 OR10J3Q5JRS4 329 aa8.78□□□□□ -1
LMO3-223ENST00000540590 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.78□□□□□ -1
LMO3-223ENST00000540590 SLC25A29Q8N8R3 303 aa8.78□□□□□ -1
LMO3-223ENST00000540590 HIST1H2BHQ93079 126 aa8.78□□□□□ -1
LMO3-223ENST00000540590 HIST1H2BNQ99877 126 aa8.78□□□□□ -1
LMO3-223ENST00000540590 HIST1H2BMQ99879 126 aa8.78□□□□□ -1
LMO3-223ENST00000540590 NIT2Q9NQR4 276 aa8.78□□□□□ -1
LMO3-223ENST00000540590 Q9UF83 564 aa8.78□□□□□ -1
LMO3-223ENST00000540590 HHLA3Q9XRX5 114 aa8.78□□□□□ -1
LMO3-223ENST00000540590 CRYBA4P53673 196 aa8.77□□□□□ -1.01
LMO3-223ENST00000540590 IQCJQ1A5X6 159 aa8.77□□□□□ -1.01
LMO3-223ENST00000540590 NEXN-AS1Q8NBZ9 246 aa8.77□□□□□ -1.01
LMO3-223ENST00000540590 C18orf32Q8TCD1 76 aa8.77□□□□□ -1.01
LMO3-223ENST00000540590 LOC100131303A0A0U1RQF7 123 aa8.76□□□□□ -1.01
LMO3-223ENST00000540590 RAB5BP61020 215 aa8.76□□□□□ -1.01
LMO3-223ENST00000540590 RPL36AP83881 106 aaKnown RBP8.76□□□□□ -1.01
LMO3-223ENST00000540590 TMEM97Q5BJF2 176 aa8.76□□□□□ -1.01
LMO3-223ENST00000540590 RPL36ALQ969Q0 106 aaKnown RBP8.76□□□□□ -1.01
LMO3-223ENST00000540590 TRBV7-3A0A075B6L6 115 aa8.75□□□□□ -1.01
LMO3-223ENST00000540590 TRAV26-1A0A087WT03 109 aa8.75□□□□□ -1.01
LMO3-223ENST00000540590 PAX4O43316 350 aa8.75□□□□□ -1.01
LMO3-223ENST00000540590 TCTAP57738 103 aa8.75□□□□□ -1.01
LMO3-223ENST00000540590 SUMO2P61956 95 aaKnown RBP8.75□□□□□ -1.01
LMO3-223ENST00000540590 DAZ4Q86SG3 579 aaKnown RBP8.75□□□□□ -1.01
LMO3-223ENST00000540590 VSIG2Q96IQ7 327 aa8.75□□□□□ -1.01
LMO3-223ENST00000540590 MAP1LC3AQ9H492 121 aa8.75□□□□□ -1.01
LMO3-223ENST00000540590 ST20Q9HBF5 79 aa8.75□□□□□ -1.01
LMO3-223ENST00000540590 NXT2Q9NPJ8 142 aaKnown RBP8.75□□□□□ -1.01
LMO3-223ENST00000540590 DAZ3Q9NR90 486 aaKnown RBP8.75□□□□□ -1.01
LMO3-223ENST00000540590 TNFRSF18Q9Y5U5 241 aa8.75□□□□□ -1.01
LMO3-223ENST00000540590 DEFB131BA0A096LNP1 70 aa8.74□□□□□ -1.01
LMO3-223ENST00000540590 A0A0J9YY99 117 aa8.74□□□□□ -1.01
LMO3-223ENST00000540590 LOC389332A0A1B0GUA5 103 aa8.74□□□□□ -1.01
LMO3-223ENST00000540590 GAGE12JA6NER3 117 aa8.74□□□□□ -1.01
LMO3-223ENST00000540590 PMCHP20382 165 aa8.74□□□□□ -1.01
LMO3-223ENST00000540590 G0S2P27469 103 aa8.74□□□□□ -1.01
LMO3-223ENST00000540590 Q0VG73 95 aa8.74□□□□□ -1.01
LMO3-223ENST00000540590 GAGE1Q13065 139 aa8.74□□□□□ -1.01
LMO3-223ENST00000540590 GAGE4Q13068 117 aa8.74□□□□□ -1.01
LMO3-223ENST00000540590 GAGE5Q13069 117 aa8.74□□□□□ -1.01
LMO3-223ENST00000540590 GAGE13Q4V321 117 aa8.74□□□□□ -1.01
LMO3-223ENST00000540590 LCE3BQ5TA77 95 aa8.74□□□□□ -1.01
LMO3-223ENST00000540590 C15orf53Q8NAA6 179 aa8.74□□□□□ -1.01
LMO3-223ENST00000540590 ZNRF2Q8NHG8 242 aa8.74□□□□□ -1.01
LMO3-223ENST00000540590 TMEM70Q9BUB7 260 aa8.74□□□□□ -1.01
LMO3-223ENST00000540590 SMIM2Q9BVW6 85 aa8.74□□□□□ -1.01
LMO3-223ENST00000540590 TRBV27A0A0K0K1C4 114 aa8.73□□□□□ -1.01
LMO3-223ENST00000540590 SDHAF1A6NFY7 115 aa8.73□□□□□ -1.01
LMO3-223ENST00000540590 LINC01549A6NIU2 74 aa8.73□□□□□ -1.01
LMO3-223ENST00000540590 VCYO14598 125 aa8.73□□□□□ -1.01
LMO3-223ENST00000540590 LINC00694P0DN24 101 aa8.73□□□□□ -1.01
LMO3-223ENST00000540590 GYPEP15421 78 aa8.73□□□□□ -1.01
LMO3-223ENST00000540590 POLR2KP53803 58 aaKnown RBP8.73□□□□□ -1.01
LMO3-223ENST00000540590 MRPL23Q16540 153 aaKnown RBP8.73□□□□□ -1.01
LMO3-223ENST00000540590 IGLV2-18A0A075B6J9 118 aa8.72□□□□□ -1.01
LMO3-223ENST00000540590 IFI27P40305 119 aaPredicted RBP8.72□□□□□ -1.01
LMO3-223ENST00000540590 UBE2D3P61077 147 aa8.72□□□□□ -1.01
LMO3-223ENST00000540590 UBE2D2P62837 147 aa8.72□□□□□ -1.01
LMO3-223ENST00000540590 NEGR1Q7Z3B1 354 aa8.72□□□□□ -1.01
LMO3-223ENST00000540590 URB1-AS1Q96HZ7 61 aa8.72□□□□□ -1.01
LMO3-223ENST00000540590 KIR2DL4Q99706 377 aa8.72□□□□□ -1.01
LMO3-223ENST00000540590 TMA7Q9Y2S6 64 aaKnown RBP8.72□□□□□ -1.01
LMO3-223ENST00000540590 NUPR2A6NF83 97 aa8.71□□□□□ -1.02
LMO3-223ENST00000540590 NDUFA6P56556 154 aa8.71□□□□□ -1.02
LMO3-223ENST00000540590 TIRAPP58753 221 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms