RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 NEXN-AS1Q8NBZ9 246 aa8.06□□□□□ -1.12
CDCA3-206ENST00000536241 ZNRF2Q8NHG8 242 aa8.06□□□□□ -1.12
CDCA3-206ENST00000536241 PHLDA1Q8WV24 401 aaPredicted RBP8.06□□□□□ -1.12
CDCA3-206ENST00000536241 PRADC1Q9BSG0 188 aa8.06□□□□□ -1.12
CDCA3-206ENST00000536241 ALKBH7Q9BT30 221 aaPredicted RBP8.06□□□□□ -1.12
CDCA3-206ENST00000536241 FBN3Q75N90 2809 aa8.06□□□□□ -1.12
CDCA3-206ENST00000536241 GAGE12JA6NER3 117 aa8.06□□□□□ -1.12
CDCA3-206ENST00000536241 GYPEP15421 78 aa8.06□□□□□ -1.12
CDCA3-206ENST00000536241 SRIP30626 198 aa8.06□□□□□ -1.12
CDCA3-206ENST00000536241 GAGE1Q13065 139 aa8.06□□□□□ -1.12
CDCA3-206ENST00000536241 GAGE4Q13068 117 aa8.06□□□□□ -1.12
CDCA3-206ENST00000536241 GAGE5Q13069 117 aa8.06□□□□□ -1.12
CDCA3-206ENST00000536241 RHOHQ15669 191 aa8.06□□□□□ -1.12
CDCA3-206ENST00000536241 GAGE13Q4V321 117 aa8.06□□□□□ -1.12
CDCA3-206ENST00000536241 OR10J3Q5JRS4 329 aa8.06□□□□□ -1.12
CDCA3-206ENST00000536241 TRBV10-1A0A0K0K1A3 114 aa8.05□□□□□ -1.12
CDCA3-206ENST00000536241 TNFRSF18Q9Y5U5 241 aa8.05□□□□□ -1.12
CDCA3-206ENST00000536241 TRBV7-3A0A075B6L6 115 aa8.04□□□□□ -1.12
CDCA3-206ENST00000536241 LOC389332A0A1B0GUA5 103 aa8.04□□□□□ -1.12
CDCA3-206ENST00000536241 PPP1R17O96001 155 aa8.04□□□□□ -1.12
CDCA3-206ENST00000536241 RPL36AP83881 106 aaKnown RBP8.04□□□□□ -1.12
CDCA3-206ENST00000536241 DEFB104AQ8WTQ1 72 aa8.04□□□□□ -1.12
CDCA3-206ENST00000536241 RPL36ALQ969Q0 106 aaKnown RBP8.04□□□□□ -1.12
CDCA3-206ENST00000536241 DNAJC30Q96LL9 226 aa8.04□□□□□ -1.12
CDCA3-206ENST00000536241 ST20Q9HBF5 79 aa8.04□□□□□ -1.12
CDCA3-206ENST00000536241 TRBV6-5A0A0K0K1A5 114 aa8.03□□□□□ -1.12
CDCA3-206ENST00000536241 POLR2KP53803 58 aaKnown RBP8.03□□□□□ -1.12
CDCA3-206ENST00000536241 SUMO2P61956 95 aaKnown RBP8.03□□□□□ -1.12
CDCA3-206ENST00000536241 IQCJQ1A5X6 159 aa8.03□□□□□ -1.12
CDCA3-206ENST00000536241 LAMTOR2Q9Y2Q5 125 aa8.03□□□□□ -1.12
CDCA3-206ENST00000536241 A0A096LPF7 62 aa8.02□□□□□ -1.13
CDCA3-206ENST00000536241 IGHV3-38A0A0C4DH36 116 aa8.02□□□□□ -1.13
CDCA3-206ENST00000536241 SDHAF1A6NFY7 115 aa8.02□□□□□ -1.13
CDCA3-206ENST00000536241 C1orf196B1AJZ1 125 aa8.02□□□□□ -1.13
CDCA3-206ENST00000536241 IGLL5B9A064 214 aa8.02□□□□□ -1.13
CDCA3-206ENST00000536241 NEGR1Q7Z3B1 354 aa8.02□□□□□ -1.13
CDCA3-206ENST00000536241 C18orf32Q8TCD1 76 aa8.02□□□□□ -1.13
CDCA3-206ENST00000536241 C20orf78Q9BR46 151 aa8.02□□□□□ -1.13
CDCA3-206ENST00000536241 STAB2Q8WWQ8 2551 aa8.02□□□□□ -1.13
CDCA3-206ENST00000536241 PRSS47A8MTI9 375 aa8.01□□□□□ -1.13
CDCA3-206ENST00000536241 H3BNG1 76 aa8.01□□□□□ -1.13
CDCA3-206ENST00000536241 HIST1H2BKO60814 126 aa8.01□□□□□ -1.13
CDCA3-206ENST00000536241 NUDT3O95989 172 aa8.01□□□□□ -1.13
CDCA3-206ENST00000536241 HIST1H2BJP06899 126 aa8.01□□□□□ -1.13
CDCA3-206ENST00000536241 HIST1H2BOP23527 126 aa8.01□□□□□ -1.13
CDCA3-206ENST00000536241 HIST1H2BBP33778 126 aa8.01□□□□□ -1.13
CDCA3-206ENST00000536241 HIST1H2BDP58876 126 aa8.01□□□□□ -1.13
CDCA3-206ENST00000536241 UBE2D3P61077 147 aa8.01□□□□□ -1.13
CDCA3-206ENST00000536241 HIST1H2BCP62807 126 aa8.01□□□□□ -1.13
CDCA3-206ENST00000536241 UBE2D2P62837 147 aa8.01□□□□□ -1.13
CDCA3-206ENST00000536241 MRPL23Q16540 153 aaKnown RBP8.01□□□□□ -1.13
CDCA3-206ENST00000536241 HIST2H2BEQ16778 126 aa8.01□□□□□ -1.13
CDCA3-206ENST00000536241 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.01□□□□□ -1.13
CDCA3-206ENST00000536241 CEMP1Q6PRD7 247 aaPredicted RBP8.01□□□□□ -1.13
CDCA3-206ENST00000536241 HIST1H2BHQ93079 126 aa8.01□□□□□ -1.13
CDCA3-206ENST00000536241 HIST1H2BNQ99877 126 aa8.01□□□□□ -1.13
CDCA3-206ENST00000536241 HIST1H2BMQ99879 126 aa8.01□□□□□ -1.13
CDCA3-206ENST00000536241 TMEM70Q9BUB7 260 aa8.01□□□□□ -1.13
CDCA3-206ENST00000536241 MAP1LC3AQ9H492 121 aa8.01□□□□□ -1.13
CDCA3-206ENST00000536241 VCYO14598 125 aa8□□□□□ -1.13
CDCA3-206ENST00000536241 PMCHP20382 165 aa8□□□□□ -1.13
CDCA3-206ENST00000536241 IFI27P40305 119 aaPredicted RBP8□□□□□ -1.13
CDCA3-206ENST00000536241 ATP6V0E2Q8NHE4 81 aa8□□□□□ -1.13
CDCA3-206ENST00000536241 PRSS3P2Q8NHM4 247 aa8□□□□□ -1.13
CDCA3-206ENST00000536241 WWC2-AS2Q96NR7 200 aa8□□□□□ -1.13
CDCA3-206ENST00000536241 ICOSQ9Y6W8 199 aa8□□□□□ -1.13
CDCA3-206ENST00000536241 IGLV2-18A0A075B6J9 118 aa8□□□□□ -1.13
CDCA3-206ENST00000536241 LINC00694P0DN24 101 aa8□□□□□ -1.13
CDCA3-206ENST00000536241 ZFAND6Q6FIF0 208 aa8□□□□□ -1.13
CDCA3-206ENST00000536241 NIT1Q86X76 327 aa8□□□□□ -1.13
CDCA3-206ENST00000536241 SMIM2Q9BVW6 85 aa8□□□□□ -1.13
CDCA3-206ENST00000536241 TRBV27A0A0K0K1C4 114 aa7.99□□□□□ -1.13
CDCA3-206ENST00000536241 I3L3M4 83 aa7.99□□□□□ -1.13
CDCA3-206ENST00000536241 TCAPO15273 167 aa7.99□□□□□ -1.13
CDCA3-206ENST00000536241 RPL32P62910 135 aaKnown RBP7.99□□□□□ -1.13
CDCA3-206ENST00000536241 Q0VG73 95 aa7.99□□□□□ -1.13
CDCA3-206ENST00000536241 DAZ4Q86SG3 579 aaKnown RBP7.99□□□□□ -1.13
CDCA3-206ENST00000536241 Q8N8P6 123 aa7.99□□□□□ -1.13
CDCA3-206ENST00000536241 MUC7Q8TAX7 377 aa7.99□□□□□ -1.13
CDCA3-206ENST00000536241 DAZ3Q9NR90 486 aaKnown RBP7.99□□□□□ -1.13
CDCA3-206ENST00000536241 NUPR2A6NF83 97 aa7.98□□□□□ -1.13
CDCA3-206ENST00000536241 RAB5BP61020 215 aa7.98□□□□□ -1.13
CDCA3-206ENST00000536241 BAGE3Q86Y29 109 aa7.98□□□□□ -1.13
CDCA3-206ENST00000536241 C15orf53Q8NAA6 179 aa7.98□□□□□ -1.13
CDCA3-206ENST00000536241 URB1-AS1Q96HZ7 61 aa7.98□□□□□ -1.13
CDCA3-206ENST00000536241 NXT2Q9NPJ8 142 aaKnown RBP7.98□□□□□ -1.13
CDCA3-206ENST00000536241 KLK5Q9Y337 293 aaPredicted RBP7.98□□□□□ -1.13
CDCA3-206ENST00000536241 LINC00614P0C842 121 aa7.97□□□□□ -1.13
CDCA3-206ENST00000536241 NDUFA6P56556 154 aa7.97□□□□□ -1.13
CDCA3-206ENST00000536241 LYPD5Q6UWN5 251 aa7.97□□□□□ -1.13
CDCA3-206ENST00000536241 NTM-AS1Q6ZSK4 140 aa7.97□□□□□ -1.13
CDCA3-206ENST00000536241 SH2D6Q7Z4S9 175 aa7.97□□□□□ -1.13
CDCA3-206ENST00000536241 KIR2DL4Q99706 377 aa7.97□□□□□ -1.13
CDCA3-206ENST00000536241 GTSF1LQ9H1H1 148 aa7.97□□□□□ -1.13
CDCA3-206ENST00000536241 APLNQ9ULZ1 77 aa7.97□□□□□ -1.13
CDCA3-206ENST00000536241 TGP01266 2768 aa7.97□□□□□ -1.13
CDCA3-206ENST00000536241 TSHBP01222 138 aa7.96□□□□□ -1.13
CDCA3-206ENST00000536241 COTL1Q14019 142 aa7.96□□□□□ -1.13
CDCA3-206ENST00000536241 ESRGQ1W209 222 aa7.96□□□□□ -1.13
CDCA3-206ENST00000536241 FA2HQ7L5A8 372 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms