RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 KLHL30-AS1Q8NEE0 82 aa8.8□□□□□ -1
ATM-222ENST00000533733 DNAJC30Q96LL9 226 aa8.8□□□□□ -1
ATM-222ENST00000533733 MAP6D1Q9H9H5 199 aa8.8□□□□□ -1
ATM-222ENST00000533733 USP9YO00507 2555 aaPredicted RBP8.79□□□□□ -1
ATM-222ENST00000533733 UTP20O75691 2785 aaKnown RBP8.79□□□□□ -1
ATM-222ENST00000533733 INSP01308 110 aa8.79□□□□□ -1
ATM-222ENST00000533733 OCIAD2Q56VL3 154 aa8.79□□□□□ -1
ATM-222ENST00000533733 SCGB1D4Q6XE38 83 aa8.79□□□□□ -1
ATM-222ENST00000533733 NEGR1Q7Z3B1 354 aa8.79□□□□□ -1
ATM-222ENST00000533733 RNASE8Q8TDE3 154 aaKnown RBP8.79□□□□□ -1
ATM-222ENST00000533733 DUX3Q96PT4 197 aa8.79□□□□□ -1
ATM-222ENST00000533733 SPANXB1Q9NS25 103 aaPredicted RBP8.79□□□□□ -1
ATM-222ENST00000533733 DOPEY2Q9Y3R5 2298 aa8.79□□□□□ -1
ATM-222ENST00000533733 CREBBPQ92793 2442 aa8.78□□□□□ -1
ATM-222ENST00000533733 KNCNA6PVL3 124 aa8.78□□□□□ -1
ATM-222ENST00000533733 DEFB136Q30KP8 78 aa8.78□□□□□ -1
ATM-222ENST00000533733 C12orf74Q32Q52 190 aa8.78□□□□□ -1
ATM-222ENST00000533733 Q6ZSV7 163 aa8.78□□□□□ -1
ATM-222ENST00000533733 DLX4Q92988 240 aaPredicted RBP8.78□□□□□ -1
ATM-222ENST00000533733 CELSR1Q9NYQ6 3014 aa8.78□□□□□ -1
ATM-222ENST00000533733 RBX1P62877 108 aa8.77□□□□□ -1
ATM-222ENST00000533733 RPL39P62891 51 aaKnown RBP8.77□□□□□ -1
ATM-222ENST00000533733 KHDC1LQ5JSQ8 128 aa8.77□□□□□ -1
ATM-222ENST00000533733 CELSR2Q9HCU4 2923 aa8.77□□□□□ -1.01
ATM-222ENST00000533733 LRRK2Q5S007 2527 aa8.77□□□□□ -1.01
ATM-222ENST00000533733 IGLL5B9A064 214 aa8.77□□□□□ -1.01
ATM-222ENST00000533733 RBMY1A1P0DJD3 496 aaKnown RBP8.77□□□□□ -1.01
ATM-222ENST00000533733 RBMY1CP0DJD4 496 aa8.77□□□□□ -1.01
ATM-222ENST00000533733 FHL3Q13643 280 aa8.77□□□□□ -1.01
ATM-222ENST00000533733 RBMY1FQ15415 496 aaKnown RBP8.77□□□□□ -1.01
ATM-222ENST00000533733 BEAN1Q3B7T3 259 aa8.77□□□□□ -1.01
ATM-222ENST00000533733 ZNF479Q96JC4 524 aa8.77□□□□□ -1.01
ATM-222ENST00000533733 TNFRSF18Q9Y5U5 241 aa8.77□□□□□ -1.01
ATM-222ENST00000533733 CD300EQ496F6 205 aaPredicted RBP8.76□□□□□ -1.01
ATM-222ENST00000533733 C18orf65Q6ZTR6 163 aa8.76□□□□□ -1.01
ATM-222ENST00000533733 VCX2Q9H322 139 aa8.76□□□□□ -1.01
ATM-222ENST00000533733 RBMY1BA6NDE4 496 aaKnown RBP8.75□□□□□ -1.01
ATM-222ENST00000533733 RBMY1EA6NEQ0 496 aaKnown RBP8.75□□□□□ -1.01
ATM-222ENST00000533733 DNAJC9-AS1A6NH13 148 aa8.75□□□□□ -1.01
ATM-222ENST00000533733 LEPROTO15243 131 aa8.75□□□□□ -1.01
ATM-222ENST00000533733 RBMY1DP0C7P1 496 aaKnown RBP8.75□□□□□ -1.01
ATM-222ENST00000533733 P0DMU3 169 aa8.75□□□□□ -1.01
ATM-222ENST00000533733 FAM231AP0DMU4 169 aa8.75□□□□□ -1.01
ATM-222ENST00000533733 FAM231CP0DMU5 169 aa8.75□□□□□ -1.01
ATM-222ENST00000533733 RRN3P1Q2M238 152 aa8.75□□□□□ -1.01
ATM-222ENST00000533733 TMEM170BQ5T4T1 132 aa8.75□□□□□ -1.01
ATM-222ENST00000533733 LYRM7Q5U5X0 104 aa8.75□□□□□ -1.01
ATM-222ENST00000533733 PLEKHB2Q96CS7 222 aa8.75□□□□□ -1.01
ATM-222ENST00000533733 LINC01587Q99440 93 aa8.75□□□□□ -1.01
ATM-222ENST00000533733 NAV2Q8IVL1 2488 aa8.75□□□□□ -1.01
ATM-222ENST00000533733 LGALS3P17931 250 aaKnown RBP8.74□□□□□ -1.01
ATM-222ENST00000533733 SRSF9Q13242 221 aaKnown RBP eCLIP8.74□□□□□ -1.01
ATM-222ENST00000533733 C16orf95Q9H693 158 aa8.74□□□□□ -1.01
ATM-222ENST00000533733 SPANXA1Q9NS26 97 aa8.74□□□□□ -1.01
ATM-222ENST00000533733 PTPN13Q12923 2485 aa8.74□□□□□ -1.01
ATM-222ENST00000533733 NACAE9PAV3 2078 aa8.74□□□□□ -1.01
ATM-222ENST00000533733 IGLV4-3A0A075B6K6 122 aa8.74□□□□□ -1.01
ATM-222ENST00000533733 F8W1H4 67 aa8.74□□□□□ -1.01
ATM-222ENST00000533733 J3QQQ9 107 aa8.74□□□□□ -1.01
ATM-222ENST00000533733 RS1O15537 224 aa8.74□□□□□ -1.01
ATM-222ENST00000533733 IGHV3-53P01767 116 aa8.74□□□□□ -1.01
ATM-222ENST00000533733 ZNRF2Q8NHG8 242 aa8.74□□□□□ -1.01
ATM-222ENST00000533733 AMELXQ99217 191 aa8.74□□□□□ -1.01
ATM-222ENST00000533733 CRYBG3Q68DQ2 2970 aa8.73□□□□□ -1.01
ATM-222ENST00000533733 A0A0J9YY99 117 aa8.73□□□□□ -1.01
ATM-222ENST00000533733 TMEM223A0PJW6 202 aa8.73□□□□□ -1.01
ATM-222ENST00000533733 UBE2D1P51668 147 aa8.73□□□□□ -1.01
ATM-222ENST00000533733 CFAP126Q5VTH2 177 aa8.73□□□□□ -1.01
ATM-222ENST00000533733 STHQ8IWL8 128 aa8.73□□□□□ -1.01
ATM-222ENST00000533733 SLC25A29Q8N8R3 303 aa8.73□□□□□ -1.01
ATM-222ENST00000533733 C11orf72Q8NBR9 251 aa8.73□□□□□ -1.01
ATM-222ENST00000533733 FAM110AQ9BQ89 295 aa8.73□□□□□ -1.01
ATM-222ENST00000533733 TSSC4Q9Y5U2 329 aaPredicted RBP8.73□□□□□ -1.01
ATM-222ENST00000533733 FBN2P35556 2912 aa8.72□□□□□ -1.01
ATM-222ENST00000533733 K7ERJ3 54 aa8.72□□□□□ -1.01
ATM-222ENST00000533733 RNASE1P07998 156 aaKnown RBP8.72□□□□□ -1.01
ATM-222ENST00000533733 CCL24O00175 119 aa8.71□□□□□ -1.01
ATM-222ENST00000533733 HTN1P15515 57 aa8.71□□□□□ -1.01
ATM-222ENST00000533733 MRPS36P82909 103 aaKnown RBP8.71□□□□□ -1.01
ATM-222ENST00000533733 SMAGPQ0VAQ4 97 aa8.71□□□□□ -1.01
ATM-222ENST00000533733 NAA38Q9BRA0 125 aaKnown RBP8.71□□□□□ -1.01
ATM-222ENST00000533733 MAP1AP78559 2803 aaPredicted RBP8.71□□□□□ -1.01
ATM-222ENST00000533733 SORL1Q92673 2214 aa8.71□□□□□ -1.01
ATM-222ENST00000533733 CIDEAO60543 219 aa8.71□□□□□ -1.02
ATM-222ENST00000533733 CD28P10747 220 aa8.71□□□□□ -1.02
ATM-222ENST00000533733 ZNF22P17026 224 aaPredicted RBP8.71□□□□□ -1.02
ATM-222ENST00000533733 ODF3L2Q3SX64 289 aa8.71□□□□□ -1.02
ATM-222ENST00000533733 WFDC11Q8NEX6 87 aa8.71□□□□□ -1.02
ATM-222ENST00000533733 TIMM21Q9BVV7 248 aa8.71□□□□□ -1.02
ATM-222ENST00000533733 GCN1Q92616 2671 aaKnown RBP8.71□□□□□ -1.02
ATM-222ENST00000533733 POLQO75417 2590 aa8.7□□□□□ -1.02
ATM-222ENST00000533733 TMEM238C9JI98 176 aa8.7□□□□□ -1.02
ATM-222ENST00000533733 COTL1Q14019 142 aa8.7□□□□□ -1.02
ATM-222ENST00000533733 IL17DQ8TAD2 202 aa8.7□□□□□ -1.02
ATM-222ENST00000533733 VPS25Q9BRG1 176 aa8.7□□□□□ -1.02
ATM-222ENST00000533733 MXRA5Q9NR99 2828 aa8.7□□□□□ -1.02
ATM-222ENST00000533733 TRBV10-1A0A0K0K1A3 114 aa8.69□□□□□ -1.02
ATM-222ENST00000533733 TINCRA0A1B0GVN0 87 aa8.69□□□□□ -1.02
ATM-222ENST00000533733 EMP1P54849 157 aa8.69□□□□□ -1.02
ATM-222ENST00000533733 SETXQ7Z333 2677 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms