RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 FAM74A4Q5TZK3 123 aa8.57□□□□□ -1.04
TRAF3IP2-211ENST00000528599 CHCHD1Q96BP2 118 aaKnown RBP8.57□□□□□ -1.04
TRAF3IP2-211ENST00000528599 HTN3P15516 51 aa8.56□□□□□ -1.04
TRAF3IP2-211ENST00000528599 FHL2Q14192 279 aa8.56□□□□□ -1.04
TRAF3IP2-211ENST00000528599 Q6ZSN1 163 aa8.56□□□□□ -1.04
TRAF3IP2-211ENST00000528599 TENM2Q9NT68 2774 aa8.56□□□□□ -1.04
TRAF3IP2-211ENST00000528599 FAM104BQ5XKR9 115 aa8.56□□□□□ -1.04
TRAF3IP2-211ENST00000528599 ZFP2Q6ZN57 461 aa8.56□□□□□ -1.04
TRAF3IP2-211ENST00000528599 NIT1Q86X76 327 aa8.56□□□□□ -1.04
TRAF3IP2-211ENST00000528599 RAB4AP20338 218 aa8.55□□□□□ -1.04
TRAF3IP2-211ENST00000528599 PMCHP20382 165 aa8.55□□□□□ -1.04
TRAF3IP2-211ENST00000528599 AMTP48728 403 aa8.55□□□□□ -1.04
TRAF3IP2-211ENST00000528599 CDPF1Q6NVV7 123 aa8.55□□□□□ -1.04
TRAF3IP2-211ENST00000528599 LYSTQ99698 3801 aa8.55□□□□□ -1.04
TRAF3IP2-211ENST00000528599 TMEM191AQ9H0A3 160 aa8.55□□□□□ -1.04
TRAF3IP2-211ENST00000528599 DPH3P1Q9H4G8 78 aa8.55□□□□□ -1.04
TRAF3IP2-211ENST00000528599 DEFB131BA0A096LNP1 70 aa8.54□□□□□ -1.04
TRAF3IP2-211ENST00000528599 TRGV4A0A0C4DH28 118 aa8.54□□□□□ -1.04
TRAF3IP2-211ENST00000528599 F5H768 121 aa8.54□□□□□ -1.04
TRAF3IP2-211ENST00000528599 RHODO00212 210 aa8.54□□□□□ -1.04
TRAF3IP2-211ENST00000528599 HSBP1O75506 76 aa8.54□□□□□ -1.04
TRAF3IP2-211ENST00000528599 LINC00614P0C842 121 aa8.54□□□□□ -1.04
TRAF3IP2-211ENST00000528599 SMIM17P0DL12 118 aa8.54□□□□□ -1.04
TRAF3IP2-211ENST00000528599 PKIAP61925 76 aa8.54□□□□□ -1.04
TRAF3IP2-211ENST00000528599 SMIM15Q7Z3B0 74 aa8.54□□□□□ -1.04
TRAF3IP2-211ENST00000528599 URB1-AS1Q96HZ7 61 aa8.54□□□□□ -1.04
TRAF3IP2-211ENST00000528599 TRAV10A0A0B4J240 114 aa8.53□□□□□ -1.04
TRAF3IP2-211ENST00000528599 CIDEAO60543 219 aa8.53□□□□□ -1.04
TRAF3IP2-211ENST00000528599 MGPP08493 103 aa8.53□□□□□ -1.04
TRAF3IP2-211ENST00000528599 GATA1P15976 413 aaPredicted RBP8.53□□□□□ -1.04
TRAF3IP2-211ENST00000528599 AMN1Q8IY45 258 aa8.53□□□□□ -1.04
TRAF3IP2-211ENST00000528599 PHLDA1Q8WV24 401 aaPredicted RBP8.53□□□□□ -1.04
TRAF3IP2-211ENST00000528599 RNF185Q96GF1 192 aa8.53□□□□□ -1.04
TRAF3IP2-211ENST00000528599 SCGB1D1O95968 90 aa8.53□□□□□ -1.04
TRAF3IP2-211ENST00000528599 PPBPP02775 128 aa8.53□□□□□ -1.04
TRAF3IP2-211ENST00000528599 ZNF56Q15929 161 aa8.53□□□□□ -1.04
TRAF3IP2-211ENST00000528599 HHLA3Q9XRX5 114 aa8.53□□□□□ -1.04
TRAF3IP2-211ENST00000528599 PLECQ15149 4684 aaKnown RBP8.52□□□□□ -1.04
TRAF3IP2-211ENST00000528599 F5H697 171 aa8.52□□□□□ -1.05
TRAF3IP2-211ENST00000528599 CRYBA4P53673 196 aa8.52□□□□□ -1.05
TRAF3IP2-211ENST00000528599 SLC25A29Q8N8R3 303 aa8.52□□□□□ -1.05
TRAF3IP2-211ENST00000528599 MUC7Q8TAX7 377 aa8.52□□□□□ -1.05
TRAF3IP2-211ENST00000528599 VSIG2Q96IQ7 327 aa8.52□□□□□ -1.05
TRAF3IP2-211ENST00000528599 Q9UF83 564 aa8.52□□□□□ -1.05
TRAF3IP2-211ENST00000528599 TRAV26-1A0A087WT03 109 aa8.51□□□□□ -1.05
TRAF3IP2-211ENST00000528599 TSTD3H0UI37 97 aa8.51□□□□□ -1.05
TRAF3IP2-211ENST00000528599 SUMO4Q6EEV6 95 aa8.51□□□□□ -1.05
TRAF3IP2-211ENST00000528599 ORMDL3Q8N138 153 aa8.51□□□□□ -1.05
TRAF3IP2-211ENST00000528599 PRO0255Q9UI72 69 aa8.51□□□□□ -1.05
TRAF3IP2-211ENST00000528599 LAMTOR2Q9Y2Q5 125 aa8.51□□□□□ -1.05
TRAF3IP2-211ENST00000528599 TRAV26-2A0A0B4J265 109 aa8.5□□□□□ -1.05
TRAF3IP2-211ENST00000528599 A0A0J9YY99 117 aa8.5□□□□□ -1.05
TRAF3IP2-211ENST00000528599 TRBV6-4A0A1B0GX49 114 aa8.5□□□□□ -1.05
TRAF3IP2-211ENST00000528599 GAS8-AS1O95177 125 aa8.5□□□□□ -1.05
TRAF3IP2-211ENST00000528599 P0DMU3 169 aa8.5□□□□□ -1.05
TRAF3IP2-211ENST00000528599 FAM231AP0DMU4 169 aa8.5□□□□□ -1.05
TRAF3IP2-211ENST00000528599 FAM231CP0DMU5 169 aa8.5□□□□□ -1.05
TRAF3IP2-211ENST00000528599 MRPL51Q4U2R6 128 aaKnown RBP8.5□□□□□ -1.05
TRAF3IP2-211ENST00000528599 TEX43Q6ZNM6 134 aa8.5□□□□□ -1.05
TRAF3IP2-211ENST00000528599 FAM19A2Q8N3H0 131 aa8.5□□□□□ -1.05
TRAF3IP2-211ENST00000528599 ZNF664Q8N3J9 261 aa8.5□□□□□ -1.05
TRAF3IP2-211ENST00000528599 LOC100131303A0A0U1RQF7 123 aa8.49□□□□□ -1.05
TRAF3IP2-211ENST00000528599 K7EQD1 137 aa8.49□□□□□ -1.05
TRAF3IP2-211ENST00000528599 M0QY20 66 aa8.49□□□□□ -1.05
TRAF3IP2-211ENST00000528599 PAX4O43316 350 aa8.49□□□□□ -1.05
TRAF3IP2-211ENST00000528599 CASC10Q5T4H9 136 aa8.49□□□□□ -1.05
TRAF3IP2-211ENST00000528599 RNASEKQ6P5S7 137 aaKnown RBP8.49□□□□□ -1.05
TRAF3IP2-211ENST00000528599 LINC00587B1AMM8 73 aa8.49□□□□□ -1.05
TRAF3IP2-211ENST00000528599 SMKR1H3BMG3 65 aa8.49□□□□□ -1.05
TRAF3IP2-211ENST00000528599 C3orf79P0CE67 100 aa8.49□□□□□ -1.05
TRAF3IP2-211ENST00000528599 ZFAND6Q6FIF0 208 aa8.49□□□□□ -1.05
TRAF3IP2-211ENST00000528599 CEMP1Q6PRD7 247 aaPredicted RBP8.49□□□□□ -1.05
TRAF3IP2-211ENST00000528599 Q8N976 141 aa8.49□□□□□ -1.05
TRAF3IP2-211ENST00000528599 PRELID3AQ96N28 172 aa8.49□□□□□ -1.05
TRAF3IP2-211ENST00000528599 DYNC2H1Q8NCM8 4307 aaKnown RBP8.48□□□□□ -1.05
TRAF3IP2-211ENST00000528599 PRSS47A8MTI9 375 aa8.48□□□□□ -1.05
TRAF3IP2-211ENST00000528599 D6R8Y8 96 aa8.48□□□□□ -1.05
TRAF3IP2-211ENST00000528599 NCR2O95944 276 aa8.48□□□□□ -1.05
TRAF3IP2-211ENST00000528599 KRTDAPP60985 99 aa8.48□□□□□ -1.05
TRAF3IP2-211ENST00000528599 RHOHQ15669 191 aa8.48□□□□□ -1.05
TRAF3IP2-211ENST00000528599 MRAP2Q96G30 205 aa8.48□□□□□ -1.05
TRAF3IP2-211ENST00000528599 AP5S1Q9NUS5 200 aa8.48□□□□□ -1.05
TRAF3IP2-211ENST00000528599 RYR3Q15413 4870 aa8.48□□□□□ -1.05
TRAF3IP2-211ENST00000528599 IGHV1-24A0A0C4DH33 117 aa8.47□□□□□ -1.05
TRAF3IP2-211ENST00000528599 LINC01546A6NGU7 62 aa8.47□□□□□ -1.05
TRAF3IP2-211ENST00000528599 IGLL5B9A064 214 aa8.47□□□□□ -1.05
TRAF3IP2-211ENST00000528599 GYPEP15421 78 aa8.47□□□□□ -1.05
TRAF3IP2-211ENST00000528599 BTF3P20290 206 aaKnown RBP8.47□□□□□ -1.05
TRAF3IP2-211ENST00000528599 CKS2P33552 79 aa8.47□□□□□ -1.05
TRAF3IP2-211ENST00000528599 PRSS3P2Q8NHM4 247 aa8.47□□□□□ -1.05
TRAF3IP2-211ENST00000528599 RPL39LQ96EH5 51 aaKnown RBP8.47□□□□□ -1.05
TRAF3IP2-211ENST00000528599 PRADC1Q9BSG0 188 aa8.47□□□□□ -1.05
TRAF3IP2-211ENST00000528599 NUPR2A6NF83 97 aa8.46□□□□□ -1.05
TRAF3IP2-211ENST00000528599 H3BNG1 76 aa8.46□□□□□ -1.05
TRAF3IP2-211ENST00000528599 PMCHL1Q16048 86 aa8.46□□□□□ -1.05
TRAF3IP2-211ENST00000528599 NEXN-AS1Q8NBZ9 246 aa8.46□□□□□ -1.05
TRAF3IP2-211ENST00000528599 SACSQ9NZJ4 4579 aa8.46□□□□□ -1.06
TRAF3IP2-211ENST00000528599 TRBV10-1A0A0K0K1A3 114 aa8.46□□□□□ -1.06
TRAF3IP2-211ENST00000528599 GAGE12JA6NER3 117 aa8.46□□□□□ -1.06
TRAF3IP2-211ENST00000528599 C3orf84H3BNL1 204 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms