RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 TRAV8-6A0A0B4J262 113 aa12.66□□□□□ -0.38
PCDHA6-202ENST00000527624 PPP1R17O96001 155 aa12.66□□□□□ -0.38
PCDHA6-202ENST00000527624 TTTY13Q9BZ97 58 aa12.66□□□□□ -0.38
PCDHA6-202ENST00000527624 CSTL1Q9H114 145 aa12.66□□□□□ -0.38
PCDHA6-202ENST00000527624 OR11H12B2RN74 326 aa12.65□□□□□ -0.38
PCDHA6-202ENST00000527624 DEFB104AQ8WTQ1 72 aa12.65□□□□□ -0.38
PCDHA6-202ENST00000527624 HIVEP1P15822 2718 aa12.65□□□□□ -0.38
PCDHA6-202ENST00000527624 JMJD1CQ15652 2540 aa12.65□□□□□ -0.38
PCDHA6-202ENST00000527624 TRAV12-1A0A0B4J245 112 aa12.65□□□□□ -0.38
PCDHA6-202ENST00000527624 ZNF56Q15929 161 aa12.65□□□□□ -0.38
PCDHA6-202ENST00000527624 STHQ8IWL8 128 aa12.65□□□□□ -0.38
PCDHA6-202ENST00000527624 SCGB3A1Q96QR1 104 aa12.65□□□□□ -0.38
PCDHA6-202ENST00000527624 HIGD1BQ9P298 99 aa12.65□□□□□ -0.38
PCDHA6-202ENST00000527624 XCL2Q9UBD3 114 aa12.65□□□□□ -0.38
PCDHA6-202ENST00000527624 FN1P02751 2386 aaKnown RBP12.65□□□□□ -0.38
PCDHA6-202ENST00000527624 H3BRM9 83 aa12.64□□□□□ -0.39
PCDHA6-202ENST00000527624 CRYGDP07320 174 aa12.64□□□□□ -0.39
PCDHA6-202ENST00000527624 PLNP26678 52 aa12.64□□□□□ -0.39
PCDHA6-202ENST00000527624 LINC01587Q99440 93 aa12.64□□□□□ -0.39
PCDHA6-202ENST00000527624 C2CD3Q4AC94 2353 aa12.64□□□□□ -0.39
PCDHA6-202ENST00000527624 K7EP13 123 aa12.63□□□□□ -0.39
PCDHA6-202ENST00000527624 INSP01308 110 aa12.63□□□□□ -0.39
PCDHA6-202ENST00000527624 F8VRH5 84 aa12.62□□□□□ -0.39
PCDHA6-202ENST00000527624 H7C1H1 209 aa12.62□□□□□ -0.39
PCDHA6-202ENST00000527624 TRBV25-1A0A075B6N4 114 aa12.62□□□□□ -0.39
PCDHA6-202ENST00000527624 C2orf66Q6UXQ4 117 aa12.62□□□□□ -0.39
PCDHA6-202ENST00000527624 C9orf118A6NHY6 69 aa12.61□□□□□ -0.39
PCDHA6-202ENST00000527624 NEXN-AS1Q8NBZ9 246 aa12.61□□□□□ -0.39
PCDHA6-202ENST00000527624 WFDC10AQ9H1F0 79 aa12.61□□□□□ -0.39
PCDHA6-202ENST00000527624 IGHV3-73A0A0B4J1V6 119 aa12.61□□□□□ -0.39
PCDHA6-202ENST00000527624 IGLV1-51P01701 117 aa12.61□□□□□ -0.39
PCDHA6-202ENST00000527624 TRPT1Q86TN4 253 aaKnown RBP12.61□□□□□ -0.39
PCDHA6-202ENST00000527624 CHAC1Q9BUX1 264 aa12.61□□□□□ -0.39
PCDHA6-202ENST00000527624 IGHV3OR16-12A0A075B7B8 117 aa12.6□□□□□ -0.39
PCDHA6-202ENST00000527624 RPL32P62910 135 aaKnown RBP12.6□□□□□ -0.39
PCDHA6-202ENST00000527624 M0QY20 66 aa12.6□□□□□ -0.39
PCDHA6-202ENST00000527624 ZNF415Q09FC8 603 aa12.6□□□□□ -0.39
PCDHA6-202ENST00000527624 NDUFA11Q86Y39 141 aa12.6□□□□□ -0.39
PCDHA6-202ENST00000527624 RNASE8Q8TDE3 154 aaKnown RBP12.6□□□□□ -0.39
PCDHA6-202ENST00000527624 CHTOPQ9Y3Y2 248 aaKnown RBP12.6□□□□□ -0.39
PCDHA6-202ENST00000527624 SDHAF1A6NFY7 115 aa12.59□□□□□ -0.39
PCDHA6-202ENST00000527624 MORN3Q6PF18 240 aaPredicted RBP12.59□□□□□ -0.39
PCDHA6-202ENST00000527624 MAPKAPK5-AS1Q8N8E1 139 aa12.59□□□□□ -0.39
PCDHA6-202ENST00000527624 CLUHP3Q96NS8 147 aa12.59□□□□□ -0.39
PCDHA6-202ENST00000527624 PF4P02776 101 aa12.58□□□□□ -0.39
PCDHA6-202ENST00000527624 POLR2KP53803 58 aaKnown RBP12.58□□□□□ -0.39
PCDHA6-202ENST00000527624 BAALCQ8WXS3 180 aa12.58□□□□□ -0.39
PCDHA6-202ENST00000527624 M0R2P5 195 aa12.58□□□□□ -0.4
PCDHA6-202ENST00000527624 C11orf72Q8NBR9 251 aa12.58□□□□□ -0.4
PCDHA6-202ENST00000527624 H3BUT2 72 aa12.57□□□□□ -0.4
PCDHA6-202ENST00000527624 GCSHP23434 173 aa12.57□□□□□ -0.4
PCDHA6-202ENST00000527624 VCYO14598 125 aa12.57□□□□□ -0.4
PCDHA6-202ENST00000527624 AZU1P20160 251 aa12.57□□□□□ -0.4
PCDHA6-202ENST00000527624 FXYD2P54710 66 aa12.57□□□□□ -0.4
PCDHA6-202ENST00000527624 C21orf62-AS1Q17RA5 79 aa12.57□□□□□ -0.4
PCDHA6-202ENST00000527624 C1orf158Q8N1D5 194 aa12.57□□□□□ -0.4
PCDHA6-202ENST00000527624 NOTCH3Q9UM47 2321 aa12.57□□□□□ -0.4
PCDHA6-202ENST00000527624 CBY1Q9Y3M2 126 aa12.57□□□□□ -0.4
PCDHA6-202ENST00000527624 GAGE10A6NGK3 116 aa12.56□□□□□ -0.4
PCDHA6-202ENST00000527624 RAB37Q96AX2 223 aa12.56□□□□□ -0.4
PCDHA6-202ENST00000527624 MRPL16Q9NX20 251 aaKnown RBP12.56□□□□□ -0.4
PCDHA6-202ENST00000527624 PRSS29PA6NIE9 313 aa12.56□□□□□ -0.4
PCDHA6-202ENST00000527624 KIR2DL4Q99706 377 aa12.56□□□□□ -0.4
PCDHA6-202ENST00000527624 LINC00467Q9BRT7 94 aa12.56□□□□□ -0.4
PCDHA6-202ENST00000527624 CYSLTR1Q9Y271 337 aa12.56□□□□□ -0.4
PCDHA6-202ENST00000527624 TRBV6-5A0A0K0K1A5 114 aa12.55□□□□□ -0.4
PCDHA6-202ENST00000527624 ZFP2Q6ZN57 461 aa12.55□□□□□ -0.4
PCDHA6-202ENST00000527624 NAA38Q9BRA0 125 aaKnown RBP12.55□□□□□ -0.4
PCDHA6-202ENST00000527624 TM2D2Q9BX73 214 aa12.55□□□□□ -0.4
PCDHA6-202ENST00000527624 P0DMU3 169 aa12.54□□□□□ -0.4
PCDHA6-202ENST00000527624 FAM231AP0DMU4 169 aa12.54□□□□□ -0.4
PCDHA6-202ENST00000527624 FAM231CP0DMU5 169 aa12.54□□□□□ -0.4
PCDHA6-202ENST00000527624 RPL35AP18077 110 aaKnown RBP12.54□□□□□ -0.4
PCDHA6-202ENST00000527624 BEAN1Q3B7T3 259 aa12.54□□□□□ -0.4
PCDHA6-202ENST00000527624 UFSP1Q6NVU6 142 aa12.54□□□□□ -0.4
PCDHA6-202ENST00000527624 CEND1Q8N111 149 aa12.54□□□□□ -0.4
PCDHA6-202ENST00000527624 C19orf73Q9NVV2 129 aa12.54□□□□□ -0.4
PCDHA6-202ENST00000527624 TRBV27A0A0K0K1C4 114 aa12.54□□□□□ -0.4
PCDHA6-202ENST00000527624 GAGE12BA1L429 117 aa12.54□□□□□ -0.4
PCDHA6-202ENST00000527624 LINC01549A6NIU2 74 aa12.54□□□□□ -0.4
PCDHA6-202ENST00000527624 SMIM13P0DJ93 91 aa12.54□□□□□ -0.4
PCDHA6-202ENST00000527624 GTF2H5Q6ZYL4 71 aa12.54□□□□□ -0.4
PCDHA6-202ENST00000527624 LINC00482Q8N8I6 264 aa12.54□□□□□ -0.4
PCDHA6-202ENST00000527624 CRLF1O75462 422 aa12.53□□□□□ -0.4
PCDHA6-202ENST00000527624 TP53TG1Q9Y2A0 90 aa12.53□□□□□ -0.4
PCDHA6-202ENST00000527624 IGIPA6NJ69 53 aa12.53□□□□□ -0.4
PCDHA6-202ENST00000527624 A8MWV9 139 aa12.53□□□□□ -0.4
PCDHA6-202ENST00000527624 CMC4P56277 68 aaPredicted RBP12.53□□□□□ -0.4
PCDHA6-202ENST00000527624 RPL39P62891 51 aaKnown RBP12.53□□□□□ -0.4
PCDHA6-202ENST00000527624 OR11H2Q8NH07 326 aa12.53□□□□□ -0.4
PCDHA6-202ENST00000527624 CYSRT1A8MQ03 144 aa12.52□□□□□ -0.41
PCDHA6-202ENST00000527624 TSHBP01222 138 aa12.52□□□□□ -0.41
PCDHA6-202ENST00000527624 GIG44P09565 113 aaPredicted RBP12.52□□□□□ -0.41
PCDHA6-202ENST00000527624 TAL2Q16559 108 aa12.52□□□□□ -0.41
PCDHA6-202ENST00000527624 CFAP126Q5VTH2 177 aa12.52□□□□□ -0.41
PCDHA6-202ENST00000527624 CST9LQ9H4G1 147 aa12.52□□□□□ -0.41
PCDHA6-202ENST00000527624 A0A1W2PPM0 123 aa12.52□□□□□ -0.41
PCDHA6-202ENST00000527624 RBX1P62877 108 aa12.52□□□□□ -0.41
PCDHA6-202ENST00000527624 Q6ZSN1 163 aa12.52□□□□□ -0.41
PCDHA6-202ENST00000527624 SPXQ9BT56 116 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms