RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 ZNF56Q15929 161 aa12.04□□□□□ -0.48
CCS-204ENST00000526066 H3BNG1 76 aa12.03□□□□□ -0.48
CCS-204ENST00000526066 MGPP08493 103 aa12.03□□□□□ -0.48
CCS-204ENST00000526066 FAM104BQ5XKR9 115 aa12.03□□□□□ -0.48
CCS-204ENST00000526066 Q6ZSN1 163 aa12.03□□□□□ -0.48
CCS-204ENST00000526066 TGIF2-C20orf24A0A0A6YYL0 155 aa12.02□□□□□ -0.49
CCS-204ENST00000526066 F5H697 171 aa12.02□□□□□ -0.49
CCS-204ENST00000526066 RAB4AP20338 218 aa12.02□□□□□ -0.49
CCS-204ENST00000526066 RHOHQ15669 191 aa12.02□□□□□ -0.49
CCS-204ENST00000526066 AMN1Q8IY45 258 aa12.02□□□□□ -0.49
CCS-204ENST00000526066 SLC25A29Q8N8R3 303 aa12.02□□□□□ -0.49
CCS-204ENST00000526066 RNF185Q96GF1 192 aa12.02□□□□□ -0.49
CCS-204ENST00000526066 TRAV26-1A0A087WT03 109 aa12.01□□□□□ -0.49
CCS-204ENST00000526066 TRBV10-1A0A0K0K1A3 114 aa12.01□□□□□ -0.49
CCS-204ENST00000526066 H7C1H1 209 aa12.01□□□□□ -0.49
CCS-204ENST00000526066 K7EQD1 137 aa12.01□□□□□ -0.49
CCS-204ENST00000526066 PAX4O43316 350 aa12.01□□□□□ -0.49
CCS-204ENST00000526066 SUMO4Q6EEV6 95 aa12.01□□□□□ -0.49
CCS-204ENST00000526066 TMEM136Q6ZRR5 245 aa12.01□□□□□ -0.49
CCS-204ENST00000526066 VSIG2Q96IQ7 327 aa12.01□□□□□ -0.49
CCS-204ENST00000526066 PRADC1Q9BSG0 188 aa12.01□□□□□ -0.49
CCS-204ENST00000526066 GNB1LQ9BYB4 327 aa12.01□□□□□ -0.49
CCS-204ENST00000526066 IGLV2-18A0A075B6J9 118 aa12□□□□□ -0.49
CCS-204ENST00000526066 M0QY20 66 aa12□□□□□ -0.49
CCS-204ENST00000526066 HLA-DQA1P01909 254 aa12□□□□□ -0.49
CCS-204ENST00000526066 MT-ND6P03923 174 aa12□□□□□ -0.49
CCS-204ENST00000526066 MRAP2Q96G30 205 aa12□□□□□ -0.49
CCS-204ENST00000526066 SCO1O75880 301 aa11.99□□□□□ -0.49
CCS-204ENST00000526066 PKHD1P08F94 4074 aa11.98□□□□□ -0.49
CCS-204ENST00000526066 MRPL51Q4U2R6 128 aaKnown RBP11.98□□□□□ -0.49
CCS-204ENST00000526066 C15orf53Q8NAA6 179 aa11.98□□□□□ -0.49
CCS-204ENST00000526066 A0A0J9YY99 117 aa11.97□□□□□ -0.49
CCS-204ENST00000526066 PPBPP02775 128 aa11.97□□□□□ -0.49
CCS-204ENST00000526066 GYPEP15421 78 aa11.97□□□□□ -0.49
CCS-204ENST00000526066 TRAV26-2A0A0B4J265 109 aa11.96□□□□□ -0.49
CCS-204ENST00000526066 C1orf134Q5TEV5 83 aa11.96□□□□□ -0.49
CCS-204ENST00000526066 DNAJC30Q96LL9 226 aa11.96□□□□□ -0.49
CCS-204ENST00000526066 ICOSQ9Y6W8 199 aa11.96□□□□□ -0.49
CCS-204ENST00000526066 COLCA2A8K830 154 aa11.95□□□□□ -0.5
CCS-204ENST00000526066 PPP1R17O96001 155 aa11.95□□□□□ -0.5
CCS-204ENST00000526066 LINC00694P0DN24 101 aa11.95□□□□□ -0.5
CCS-204ENST00000526066 MRPL23Q16540 153 aaKnown RBP11.95□□□□□ -0.5
CCS-204ENST00000526066 NEXN-AS1Q8NBZ9 246 aa11.95□□□□□ -0.5
CCS-204ENST00000526066 NIT2Q9NQR4 276 aa11.95□□□□□ -0.5
CCS-204ENST00000526066 TRBV6-5A0A0K0K1A5 114 aa11.94□□□□□ -0.5
CCS-204ENST00000526066 LOC100131303A0A0U1RQF7 123 aa11.94□□□□□ -0.5
CCS-204ENST00000526066 APCSP02743 223 aa11.94□□□□□ -0.5
CCS-204ENST00000526066 CKS2P33552 79 aa11.94□□□□□ -0.5
CCS-204ENST00000526066 RPL36AP83881 106 aaKnown RBP11.94□□□□□ -0.5
CCS-204ENST00000526066 Q6ZR54 194 aa11.94□□□□□ -0.5
CCS-204ENST00000526066 SH2D6Q7Z4S9 175 aa11.94□□□□□ -0.5
CCS-204ENST00000526066 RPL36ALQ969Q0 106 aaKnown RBP11.94□□□□□ -0.5
CCS-204ENST00000526066 Q9UF83 564 aa11.94□□□□□ -0.5
CCS-204ENST00000526066 FAT2Q9NYQ8 4349 aa11.93□□□□□ -0.5
CCS-204ENST00000526066 TRBV7-3A0A075B6L6 115 aa11.93□□□□□ -0.5
CCS-204ENST00000526066 A0A096LPF7 62 aa11.93□□□□□ -0.5
CCS-204ENST00000526066 ORMDL3Q8N138 153 aa11.93□□□□□ -0.5
CCS-204ENST00000526066 MRPL18Q9H0U6 180 aaKnown RBP11.93□□□□□ -0.5
CCS-204ENST00000526066 GAGE12JA6NER3 117 aa11.92□□□□□ -0.5
CCS-204ENST00000526066 D6R8Y8 96 aa11.92□□□□□ -0.5
CCS-204ENST00000526066 SMKR1H3BMG3 65 aa11.92□□□□□ -0.5
CCS-204ENST00000526066 PHOX2AO14813 284 aa11.92□□□□□ -0.5
CCS-204ENST00000526066 GAS8-AS1O95177 125 aa11.92□□□□□ -0.5
CCS-204ENST00000526066 NCR2O95944 276 aa11.92□□□□□ -0.5
CCS-204ENST00000526066 SRIP30626 198 aa11.92□□□□□ -0.5
CCS-204ENST00000526066 GAGE1Q13065 139 aa11.92□□□□□ -0.5
CCS-204ENST00000526066 GAGE4Q13068 117 aa11.92□□□□□ -0.5
CCS-204ENST00000526066 GAGE5Q13069 117 aa11.92□□□□□ -0.5
CCS-204ENST00000526066 GAGE13Q4V321 117 aa11.92□□□□□ -0.5
CCS-204ENST00000526066 OR10J3Q5JRS4 329 aa11.92□□□□□ -0.5
CCS-204ENST00000526066 NRACQ8N912 160 aa11.92□□□□□ -0.5
CCS-204ENST00000526066 ZNRF2Q8NHG8 242 aa11.92□□□□□ -0.5
CCS-204ENST00000526066 RPL39LQ96EH5 51 aaKnown RBP11.92□□□□□ -0.5
CCS-204ENST00000526066 LAMTOR2Q9Y2Q5 125 aa11.92□□□□□ -0.5
CCS-204ENST00000526066 TRAPPC1Q9Y5R8 145 aa11.92□□□□□ -0.5
CCS-204ENST00000526066 TNFRSF18Q9Y5U5 241 aa11.92□□□□□ -0.5
CCS-204ENST00000526066 ABCA13Q86UQ4 5058 aa11.91□□□□□ -0.5
CCS-204ENST00000526066 C16orf90A8MZG2 172 aa11.91□□□□□ -0.5
CCS-204ENST00000526066 NUDT3O95989 172 aa11.91□□□□□ -0.5
CCS-204ENST00000526066 RAB5AP20339 215 aa11.91□□□□□ -0.5
CCS-204ENST00000526066 RPS10P46783 165 aaKnown RBP11.91□□□□□ -0.5
CCS-204ENST00000526066 UBE2D3P61077 147 aa11.91□□□□□ -0.5
CCS-204ENST00000526066 UBE2D2P62837 147 aa11.91□□□□□ -0.5
CCS-204ENST00000526066 DNAH2Q9P225 4427 aa11.91□□□□□ -0.5
CCS-204ENST00000526066 FABP9Q0Z7S8 132 aa11.9□□□□□ -0.5
CCS-204ENST00000526066 NEGR1Q7Z3B1 354 aa11.9□□□□□ -0.5
CCS-204ENST00000526066 PRELID3AQ96N28 172 aa11.9□□□□□ -0.5
CCS-204ENST00000526066 TNFRSF6BO95407 300 aa11.89□□□□□ -0.51
CCS-204ENST00000526066 DAZ4Q86SG3 579 aaKnown RBP11.89□□□□□ -0.51
CCS-204ENST00000526066 ATP6V0E2Q8NHE4 81 aa11.89□□□□□ -0.51
CCS-204ENST00000526066 C20orf78Q9BR46 151 aa11.89□□□□□ -0.51
CCS-204ENST00000526066 KRTAP4-5Q9BYR2 181 aa11.89□□□□□ -0.51
CCS-204ENST00000526066 ST20Q9HBF5 79 aa11.89□□□□□ -0.51
CCS-204ENST00000526066 DAZ3Q9NR90 486 aaKnown RBP11.89□□□□□ -0.51
CCS-204ENST00000526066 DNAH17Q9UFH2 4485 aa11.89□□□□□ -0.51
CCS-204ENST00000526066 NPYP01303 97 aa11.88□□□□□ -0.51
CCS-204ENST00000526066 TIRAPP58753 221 aa11.88□□□□□ -0.51
CCS-204ENST00000526066 SUMO2P61956 95 aaKnown RBP11.88□□□□□ -0.51
CCS-204ENST00000526066 RPL32P62910 135 aaKnown RBP11.88□□□□□ -0.51
CCS-204ENST00000526066 KIAA1644Q3SXP7 199 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 175 ms