RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 SMIM15Q7Z3B0 74 aa3.14□□□□□ -1.91
CHMP4A-202ENST00000524955 CLRN3Q8NCR9 226 aa3.14□□□□□ -1.91
CHMP4A-202ENST00000524955 DNAJC30Q96LL9 226 aa3.14□□□□□ -1.91
CHMP4A-202ENST00000524955 CNFNQ9BYD5 112 aa3.14□□□□□ -1.91
CHMP4A-202ENST00000524955 GFRA4Q9GZZ7 299 aa3.14□□□□□ -1.91
CHMP4A-202ENST00000524955 CSMD3Q7Z407 3707 aa3.14□□□□□ -1.91
CHMP4A-202ENST00000524955 DNAH7Q8WXX0 4024 aa3.13□□□□□ -1.91
CHMP4A-202ENST00000524955 TRBV7-3A0A075B6L6 115 aa3.13□□□□□ -1.91
CHMP4A-202ENST00000524955 NBDYA0A0U1RRE5 68 aa3.13□□□□□ -1.91
CHMP4A-202ENST00000524955 A0A1B0GXF2 115 aa3.13□□□□□ -1.91
CHMP4A-202ENST00000524955 FAM231BA6NCW3 169 aa3.13□□□□□ -1.91
CHMP4A-202ENST00000524955 PPP1R2P9O14990 202 aa3.13□□□□□ -1.91
CHMP4A-202ENST00000524955 SIVA1O15304 175 aa3.13□□□□□ -1.91
CHMP4A-202ENST00000524955 HBBP68871 147 aa3.13□□□□□ -1.91
CHMP4A-202ENST00000524955 GAGE6Q13070 117 aa3.13□□□□□ -1.91
CHMP4A-202ENST00000524955 MRPL51Q4U2R6 128 aaKnown RBP3.13□□□□□ -1.91
CHMP4A-202ENST00000524955 C10orf91Q5T1B1 145 aa3.13□□□□□ -1.91
CHMP4A-202ENST00000524955 DAZ4Q86SG3 579 aaKnown RBP3.13□□□□□ -1.91
CHMP4A-202ENST00000524955 ANAPC16Q96DE5 110 aa3.13□□□□□ -1.91
CHMP4A-202ENST00000524955 IMMP2LQ96T52 175 aa3.13□□□□□ -1.91
CHMP4A-202ENST00000524955 TMEM191AQ9H0A3 160 aa3.13□□□□□ -1.91
CHMP4A-202ENST00000524955 GTSF1LQ9H1H1 148 aa3.13□□□□□ -1.91
CHMP4A-202ENST00000524955 Q9HAA7 133 aa3.13□□□□□ -1.91
CHMP4A-202ENST00000524955 NIT2Q9NQR4 276 aa3.13□□□□□ -1.91
CHMP4A-202ENST00000524955 DAZ3Q9NR90 486 aaKnown RBP3.13□□□□□ -1.91
CHMP4A-202ENST00000524955 CARHSP1Q9Y2V2 147 aaKnown RBP3.13□□□□□ -1.91
CHMP4A-202ENST00000524955 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.12□□□□□ -1.91
CHMP4A-202ENST00000524955 TRBV6-8A0A0A6YYG3 113 aa3.12□□□□□ -1.91
CHMP4A-202ENST00000524955 TGIF2-C20orf24A0A0A6YYL0 155 aa3.12□□□□□ -1.91
CHMP4A-202ENST00000524955 TRAV8-6A0A0B4J262 113 aa3.12□□□□□ -1.91
CHMP4A-202ENST00000524955 TRBV10-1A0A0K0K1A3 114 aa3.12□□□□□ -1.91
CHMP4A-202ENST00000524955 IGKV2-29A2NJV5 120 aaPredicted RBP3.12□□□□□ -1.91
CHMP4A-202ENST00000524955 D6R8Y8 96 aa3.12□□□□□ -1.91
CHMP4A-202ENST00000524955 TMEM262E9PQX1 116 aa3.12□□□□□ -1.91
CHMP4A-202ENST00000524955 H7C1H1 209 aa3.12□□□□□ -1.91
CHMP4A-202ENST00000524955 RTL8CO15255 209 aa3.12□□□□□ -1.91
CHMP4A-202ENST00000524955 NPYP01303 97 aa3.12□□□□□ -1.91
CHMP4A-202ENST00000524955 FUSP35637 526 aaKnown RBP eCLIP3.12□□□□□ -1.91
CHMP4A-202ENST00000524955 KIAA1644Q3SXP7 199 aa3.12□□□□□ -1.91
CHMP4A-202ENST00000524955 LELP1Q5T871 98 aa3.12□□□□□ -1.91
CHMP4A-202ENST00000524955 FAM104BQ5XKR9 115 aa3.12□□□□□ -1.91
CHMP4A-202ENST00000524955 CLPSL2Q6UWE3 100 aa3.12□□□□□ -1.91
CHMP4A-202ENST00000524955 Q6ZR54 194 aa3.12□□□□□ -1.91
CHMP4A-202ENST00000524955 CBLN2Q8IUK8 224 aa3.12□□□□□ -1.91
CHMP4A-202ENST00000524955 Q8N976 141 aa3.12□□□□□ -1.91
CHMP4A-202ENST00000524955 CHCHD5Q9BSY4 110 aa3.12□□□□□ -1.91
CHMP4A-202ENST00000524955 UPK3BQ9BT76 320 aa3.12□□□□□ -1.91
CHMP4A-202ENST00000524955 TMEM242Q9NWH2 141 aa3.12□□□□□ -1.91
CHMP4A-202ENST00000524955 KMT2CQ8NEZ4 4911 aaKnown RBP3.12□□□□□ -1.91
CHMP4A-202ENST00000524955 DYNC2H1Q8NCM8 4307 aaKnown RBP3.11□□□□□ -1.91
CHMP4A-202ENST00000524955 LOC389332A0A1B0GUA5 103 aa3.11□□□□□ -1.91
CHMP4A-202ENST00000524955 SDHAF1A6NFY7 115 aa3.11□□□□□ -1.91
CHMP4A-202ENST00000524955 SCO1O75880 301 aa3.11□□□□□ -1.91
CHMP4A-202ENST00000524955 PMCHP20382 165 aa3.11□□□□□ -1.91
CHMP4A-202ENST00000524955 CKS2P33552 79 aa3.11□□□□□ -1.91
CHMP4A-202ENST00000524955 AMTP48728 403 aa3.11□□□□□ -1.91
CHMP4A-202ENST00000524955 NDUFA5Q16718 116 aa3.11□□□□□ -1.91
CHMP4A-202ENST00000524955 MPV17L2Q567V2 206 aa3.11□□□□□ -1.91
CHMP4A-202ENST00000524955 C1orf134Q5TEV5 83 aa3.11□□□□□ -1.91
CHMP4A-202ENST00000524955 KCNIP4Q6PIL6 250 aa3.11□□□□□ -1.91
CHMP4A-202ENST00000524955 TMEM136Q6ZRR5 245 aa3.11□□□□□ -1.91
CHMP4A-202ENST00000524955 SH2D6Q7Z4S9 175 aa3.11□□□□□ -1.91
CHMP4A-202ENST00000524955 NIT1Q86X76 327 aa3.11□□□□□ -1.91
CHMP4A-202ENST00000524955 NRACQ8N912 160 aa3.11□□□□□ -1.91
CHMP4A-202ENST00000524955 BTF3L4Q96K17 158 aa3.11□□□□□ -1.91
CHMP4A-202ENST00000524955 CTDSP1Q9GZU7 261 aa3.11□□□□□ -1.91
CHMP4A-202ENST00000524955 ST20Q9HBF5 79 aa3.11□□□□□ -1.91
CHMP4A-202ENST00000524955 KLK12Q9UKR0 248 aa3.11□□□□□ -1.91
CHMP4A-202ENST00000524955 NACAE9PAV3 2078 aa3.11□□□□□ -1.91
CHMP4A-202ENST00000524955 ALMS1Q8TCU4 4167 aa3.11□□□□□ -1.91
CHMP4A-202ENST00000524955 HYDINQ4G0P3 5121 aa3.11□□□□□ -1.91
CHMP4A-202ENST00000524955 RYR2Q92736 4967 aa3.1□□□□□ -1.91
CHMP4A-202ENST00000524955 IGLV4-60A0A075B6I1 120 aa3.1□□□□□ -1.91
CHMP4A-202ENST00000524955 A0A087WWC5 75 aa3.1□□□□□ -1.91
CHMP4A-202ENST00000524955 A0A087WX48 190 aa3.1□□□□□ -1.91
CHMP4A-202ENST00000524955 IGHV1-24A0A0C4DH33 117 aa3.1□□□□□ -1.91
CHMP4A-202ENST00000524955 IGKV3OR2-268A0A0C4DH90 116 aa3.1□□□□□ -1.91
CHMP4A-202ENST00000524955 PRSS29PA6NIE9 313 aa3.1□□□□□ -1.91
CHMP4A-202ENST00000524955 TCAPO15273 167 aa3.1□□□□□ -1.91
CHMP4A-202ENST00000524955 SNAPINO95295 136 aa3.1□□□□□ -1.91
CHMP4A-202ENST00000524955 TNFRSF6BO95407 300 aa3.1□□□□□ -1.91
CHMP4A-202ENST00000524955 TSHBP01222 138 aa3.1□□□□□ -1.91
CHMP4A-202ENST00000524955 ANGP03950 147 aaKnown RBP3.1□□□□□ -1.91
CHMP4A-202ENST00000524955 DNAH10OSP0CZ25 163 aa3.1□□□□□ -1.91
CHMP4A-202ENST00000524955 S100PP25815 95 aa3.1□□□□□ -1.91
CHMP4A-202ENST00000524955 TIRAPP58753 221 aa3.1□□□□□ -1.91
CHMP4A-202ENST00000524955 TNP2Q05952 138 aa3.1□□□□□ -1.91
CHMP4A-202ENST00000524955 COTL1Q14019 142 aa3.1□□□□□ -1.91
CHMP4A-202ENST00000524955 RHEBQ15382 184 aa3.1□□□□□ -1.91
CHMP4A-202ENST00000524955 ATP5L2Q7Z4Y8 100 aa3.1□□□□□ -1.91
CHMP4A-202ENST00000524955 SVBPQ8N300 66 aa3.1□□□□□ -1.91
CHMP4A-202ENST00000524955 C6orf223Q8N319 242 aa3.1□□□□□ -1.91
CHMP4A-202ENST00000524955 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.1□□□□□ -1.91
CHMP4A-202ENST00000524955 UBE2WQ96B02 151 aa3.1□□□□□ -1.91
CHMP4A-202ENST00000524955 MRAP2Q96G30 205 aa3.1□□□□□ -1.91
CHMP4A-202ENST00000524955 PRELID3AQ96N28 172 aa3.1□□□□□ -1.91
CHMP4A-202ENST00000524955 TMEM243Q9BU79 118 aa3.1□□□□□ -1.91
CHMP4A-202ENST00000524955 TMEM70Q9BUB7 260 aa3.1□□□□□ -1.91
CHMP4A-202ENST00000524955 RYR3Q15413 4870 aa3.1□□□□□ -1.91
CHMP4A-202ENST00000524955 PLECQ15149 4684 aaKnown RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms