RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 TRAV9-2A0A087WT02 112 aa5.13□□□□□ -1.59
VPS11-201ENST00000524454 MUC21A0A0G2JKD1 596 aa5.13□□□□□ -1.59
VPS11-201ENST00000524454 TRBV27A0A0K0K1C4 114 aa5.13□□□□□ -1.59
VPS11-201ENST00000524454 MUC21A0A140T8X8 626 aa5.13□□□□□ -1.59
VPS11-201ENST00000524454 RBMY1BA6NDE4 496 aaKnown RBP5.13□□□□□ -1.59
VPS11-201ENST00000524454 RBMY1EA6NEQ0 496 aaKnown RBP5.13□□□□□ -1.59
VPS11-201ENST00000524454 CBY3A6NI87 242 aa5.13□□□□□ -1.59
VPS11-201ENST00000524454 KNCNA6PVL3 124 aa5.13□□□□□ -1.59
VPS11-201ENST00000524454 J3KRW8 73 aa5.13□□□□□ -1.59
VPS11-201ENST00000524454 NCR2O95944 276 aa5.13□□□□□ -1.59
VPS11-201ENST00000524454 NPSP0C0P6 89 aa5.13□□□□□ -1.59
VPS11-201ENST00000524454 RBMY1DP0C7P1 496 aaKnown RBP5.13□□□□□ -1.59
VPS11-201ENST00000524454 LAGE3Q14657 143 aa5.13□□□□□ -1.59
VPS11-201ENST00000524454 ZNF876PQ49A33 203 aa5.13□□□□□ -1.59
VPS11-201ENST00000524454 GTSCR1Q86UQ5 136 aa5.13□□□□□ -1.59
VPS11-201ENST00000524454 ZNF664Q8N3J9 261 aa5.13□□□□□ -1.59
VPS11-201ENST00000524454 C14orf178Q8N769 122 aaPredicted RBP5.13□□□□□ -1.59
VPS11-201ENST00000524454 RASL10AQ92737 203 aa5.13□□□□□ -1.59
VPS11-201ENST00000524454 ST20Q9HBF5 79 aa5.13□□□□□ -1.59
VPS11-201ENST00000524454 RETNQ9HD89 108 aa5.13□□□□□ -1.59
VPS11-201ENST00000524454 HUWE1Q7Z6Z7 4374 aaKnown RBP5.12□□□□□ -1.59
VPS11-201ENST00000524454 VCYO14598 125 aa5.12□□□□□ -1.59
VPS11-201ENST00000524454 IGKV3-20P01619 116 aa5.12□□□□□ -1.59
VPS11-201ENST00000524454 CRYGDP07320 174 aa5.12□□□□□ -1.59
VPS11-201ENST00000524454 RBMY1A1P0DJD3 496 aaKnown RBP5.12□□□□□ -1.59
VPS11-201ENST00000524454 RBMY1CP0DJD4 496 aa5.12□□□□□ -1.59
VPS11-201ENST00000524454 RBMY1FQ15415 496 aaKnown RBP5.12□□□□□ -1.59
VPS11-201ENST00000524454 C11orf72Q8NBR9 251 aa5.12□□□□□ -1.59
VPS11-201ENST00000524454 TMEM263Q8WUH6 116 aaKnown RBP5.12□□□□□ -1.59
VPS11-201ENST00000524454 MDFICQ9P1T7 246 aa5.12□□□□□ -1.59
VPS11-201ENST00000524454 GOLT1BQ9Y3E0 138 aa5.12□□□□□ -1.59
VPS11-201ENST00000524454 TRAV12-1A0A0B4J245 112 aa5.11□□□□□ -1.59
VPS11-201ENST00000524454 PCP4L1A6NKN8 68 aa5.11□□□□□ -1.59
VPS11-201ENST00000524454 SMKR1H3BMG3 65 aa5.11□□□□□ -1.59
VPS11-201ENST00000524454 M0QY20 66 aa5.11□□□□□ -1.59
VPS11-201ENST00000524454 NHLRC4P0CG21 123 aaPredicted RBP5.11□□□□□ -1.59
VPS11-201ENST00000524454 POLR2KP53803 58 aaKnown RBP5.11□□□□□ -1.59
VPS11-201ENST00000524454 DAZ2Q13117 558 aaKnown RBP5.11□□□□□ -1.59
VPS11-201ENST00000524454 RHOHQ15669 191 aa5.11□□□□□ -1.59
VPS11-201ENST00000524454 ZNF124Q15973 351 aa5.11□□□□□ -1.59
VPS11-201ENST00000524454 UFSP1Q6NVU6 142 aa5.11□□□□□ -1.59
VPS11-201ENST00000524454 IFI27L1Q96BM0 104 aa5.11□□□□□ -1.59
VPS11-201ENST00000524454 DNAJC30Q96LL9 226 aa5.11□□□□□ -1.59
VPS11-201ENST00000524454 KIR2DL4Q99706 377 aa5.11□□□□□ -1.59
VPS11-201ENST00000524454 MIEN1Q9BRT3 115 aa5.11□□□□□ -1.59
VPS11-201ENST00000524454 LOC389332A0A1B0GUA5 103 aa5.1□□□□□ -1.59
VPS11-201ENST00000524454 HSBP1L1C9JCN9 74 aa5.1□□□□□ -1.59
VPS11-201ENST00000524454 MGPP08493 103 aa5.1□□□□□ -1.59
VPS11-201ENST00000524454 SSTP61278 116 aa5.1□□□□□ -1.59
VPS11-201ENST00000524454 SUMO4Q6EEV6 95 aa5.1□□□□□ -1.59
VPS11-201ENST00000524454 ZNF705AQ6ZN79 300 aaPredicted RBP5.1□□□□□ -1.59
VPS11-201ENST00000524454 KIR2DL5BQ8NHK3 375 aa5.1□□□□□ -1.59
VPS11-201ENST00000524454 RNASE8Q8TDE3 154 aaKnown RBP5.1□□□□□ -1.59
VPS11-201ENST00000524454 TOMM6Q96B49 74 aa5.1□□□□□ -1.59
VPS11-201ENST00000524454 C16orf74Q96GX8 76 aa5.1□□□□□ -1.59
VPS11-201ENST00000524454 WWC2-AS2Q96NR7 200 aa5.1□□□□□ -1.59
VPS11-201ENST00000524454 LINC01587Q99440 93 aa5.1□□□□□ -1.59
VPS11-201ENST00000524454 TM2D3Q9BRN9 247 aa5.1□□□□□ -1.59
VPS11-201ENST00000524454 UQCR10Q9UDW1 63 aa5.1□□□□□ -1.59
VPS11-201ENST00000524454 PLA2G2DQ9UNK4 145 aa5.1□□□□□ -1.59
VPS11-201ENST00000524454 TIMM8BQ9Y5J9 83 aaPredicted RBP5.1□□□□□ -1.59
VPS11-201ENST00000524454 TRAV26-2A0A0B4J265 109 aa5.09□□□□□ -1.59
VPS11-201ENST00000524454 TRBV10-1A0A0K0K1A3 114 aa5.09□□□□□ -1.59
VPS11-201ENST00000524454 SMIM9A6NGZ8 99 aa5.09□□□□□ -1.59
VPS11-201ENST00000524454 LINC00587B1AMM8 73 aa5.09□□□□□ -1.59
VPS11-201ENST00000524454 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.09□□□□□ -1.59
VPS11-201ENST00000524454 RS1O15537 224 aa5.09□□□□□ -1.59
VPS11-201ENST00000524454 GAS8-AS1O95177 125 aa5.09□□□□□ -1.59
VPS11-201ENST00000524454 IGHV3-53P01767 116 aa5.09□□□□□ -1.59
VPS11-201ENST00000524454 IGLC3P0DOY3 106 aa5.09□□□□□ -1.59
VPS11-201ENST00000524454 GATA1P15976 413 aaPredicted RBP5.09□□□□□ -1.59
VPS11-201ENST00000524454 PLNP26678 52 aa5.09□□□□□ -1.59
VPS11-201ENST00000524454 CRYBA4P53673 196 aa5.09□□□□□ -1.59
VPS11-201ENST00000524454 ZNF56Q15929 161 aa5.09□□□□□ -1.59
VPS11-201ENST00000524454 SPATA45Q537H7 98 aa5.09□□□□□ -1.59
VPS11-201ENST00000524454 ERASQ7Z444 233 aa5.09□□□□□ -1.59
VPS11-201ENST00000524454 C1orf158Q8N1D5 194 aa5.09□□□□□ -1.59
VPS11-201ENST00000524454 CSNK1G2-AS1Q8NCQ2 148 aa5.09□□□□□ -1.59
VPS11-201ENST00000524454 TMEM141Q96I45 108 aa5.09□□□□□ -1.59
VPS11-201ENST00000524454 C18orf15Q96N68 181 aa5.09□□□□□ -1.59
VPS11-201ENST00000524454 TIMM17AQ99595 171 aa5.09□□□□□ -1.59
VPS11-201ENST00000524454 PMCHL2Q9BQD1 86 aa5.09□□□□□ -1.59
VPS11-201ENST00000524454 TMEM208Q9BTX3 173 aa5.09□□□□□ -1.59
VPS11-201ENST00000524454 ZMAT4Q9H898 229 aa5.09□□□□□ -1.59
VPS11-201ENST00000524454 CYSLTR1Q9Y271 337 aa5.09□□□□□ -1.59
VPS11-201ENST00000524454 MUC4Q99102 2169 aa5.08□□□□□ -1.6
VPS11-201ENST00000524454 SDHAF1A6NFY7 115 aa5.08□□□□□ -1.6
VPS11-201ENST00000524454 A8MZ25 164 aa5.08□□□□□ -1.6
VPS11-201ENST00000524454 DLEU1O43261 78 aa5.08□□□□□ -1.6
VPS11-201ENST00000524454 NUDT3O95989 172 aa5.08□□□□□ -1.6
VPS11-201ENST00000524454 PAPPA-AS1Q5QFB9 102 aa5.08□□□□□ -1.6
VPS11-201ENST00000524454 CFAP126Q5VTH2 177 aa5.08□□□□□ -1.6
VPS11-201ENST00000524454 LINC00173Q6ZV60 143 aa5.08□□□□□ -1.6
VPS11-201ENST00000524454 OVOL2Q9BRP0 275 aa5.08□□□□□ -1.6
VPS11-201ENST00000524454 CSTL1Q9H114 145 aa5.08□□□□□ -1.6
VPS11-201ENST00000524454 MRPS16Q9Y3D3 137 aaKnown RBP5.08□□□□□ -1.6
VPS11-201ENST00000524454 PAM16Q9Y3D7 125 aa5.08□□□□□ -1.6
VPS11-201ENST00000524454 TENM3Q9P273 2699 aa5.08□□□□□ -1.6
VPS11-201ENST00000524454 A0A087WWL8 130 aa5.07□□□□□ -1.6
VPS11-201ENST00000524454 TRAV4A0A0B4J268 109 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms