RNA–Protein interactions for RNA: ENST00000524094.1

LINC01339-204, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 3

Gene LINC01339, Length 269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-204ENST00000524094 RNASE7Q9H1E1 156 aaKnown RBP1.77□□□□□ -2.13
LINC01339-204ENST00000524094 RPP21Q9H633 154 aaKnown RBP1.77□□□□□ -2.13
LINC01339-204ENST00000524094 ZNF492Q9P255 531 aa1.77□□□□□ -2.13
LINC01339-204ENST00000524094 UFC1Q9Y3C8 167 aa1.77□□□□□ -2.13
LINC01339-204ENST00000524094 SOX21Q9Y651 276 aaPredicted RBP1.77□□□□□ -2.13
LINC01339-204ENST00000524094 SMAD5-AS1Q9Y6J3 95 aa1.77□□□□□ -2.13
LINC01339-204ENST00000524094 S4R3C0 116 aa1.77□□□□□ -2.13
LINC01339-204ENST00000524094 ZNF469Q96JG9 3925 aaPredicted RBP1.77□□□□□ -2.13
LINC01339-204ENST00000524094 IGHV3OR16-8A0A075B7F1 116 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 A0A096LNT2 108 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.76□□□□□ -2.13
LINC01339-204ENST00000524094 SMIM27A0A1W2PRY6 76 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 TMEM189A5PLL7 270 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 RBAKDNA6NC62 111 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 IZUMO1RA6ND01 250 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 SPINK4O60575 86 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 HIST1H2BKO60814 126 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 LY6G6DO95868 133 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 IGHV3-11P01762 117 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 APCSP02743 223 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 HIST1H2BJP06899 126 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 CTSGP08311 255 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 FABP4P15090 132 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 CRISP2P16562 243 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 PMCHP20382 165 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 HIST1H2BOP23527 126 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 HIST1H2BBP33778 126 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 MYCNOSP40205 109 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 HIST1H2BDP58876 126 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 HIST1H2BCP62807 126 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 PAFAH1B2P68402 229 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 HBBP68871 147 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 S100A12P80511 92 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 HIST2H2BEQ16778 126 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 DEFB112Q30KQ8 113 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 SMUG1Q53HV7 270 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 PDZD11Q5EBL8 140 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.76□□□□□ -2.13
LINC01339-204ENST00000524094 LCN12Q6JVE5 192 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 MRPL54Q6P161 138 aaKnown RBP1.76□□□□□ -2.13
LINC01339-204ENST00000524094 Q6ZN92 141 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 SMIM15Q7Z3B0 74 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 TMEM183AQ8IXX5 376 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 ZNF738Q8NE65 137 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 OR4X2Q8NGF9 303 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 OR2D3Q8NGH3 330 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 OR10J6PQ8NGY7 276 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 ZNF418Q8TF45 676 aaPredicted RBP1.76□□□□□ -2.13
LINC01339-204ENST00000524094 HIST1H2BHQ93079 126 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 RNF185Q96GF1 192 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 PACRGQ96M98 296 aaPredicted RBP1.76□□□□□ -2.13
LINC01339-204ENST00000524094 C12orf57Q99622 126 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 HIST1H2BNQ99877 126 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 HIST1H2BMQ99879 126 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 DAZ1Q9NQZ3 744 aaKnown RBP1.76□□□□□ -2.13
LINC01339-204ENST00000524094 ZNF586Q9NXT0 402 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 LINC00527Q9UJ94 153 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 PSG8Q9UQ74 426 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 KLF12Q9Y4X4 402 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 V9GYV3 84 aa1.76□□□□□ -2.13
LINC01339-204ENST00000524094 PRKDCP78527 4128 aaKnown RBP1.76□□□□□ -2.13
LINC01339-204ENST00000524094 SONP18583 2426 aaKnown RBP1.76□□□□□ -2.13
LINC01339-204ENST00000524094 NACAE9PAV3 2078 aa1.75□□□□□ -2.13
LINC01339-204ENST00000524094 IGKV2-40A0A087WW87 121 aaPredicted RBP1.75□□□□□ -2.13
LINC01339-204ENST00000524094 TRAV8-1A0A0A6YYK1 113 aa1.75□□□□□ -2.13
LINC01339-204ENST00000524094 IGHV3-74A0A0B4J1X5 117 aa1.75□□□□□ -2.13
LINC01339-204ENST00000524094 IGHV3-66A0A0C4DH42 116 aa1.75□□□□□ -2.13
LINC01339-204ENST00000524094 IGHV7-4-1A0A0J9YVY3 117 aa1.75□□□□□ -2.13
LINC01339-204ENST00000524094 A0A1B0GUT8 65 aa1.75□□□□□ -2.13
LINC01339-204ENST00000524094 PLAC8L1A1L4L8 177 aa1.75□□□□□ -2.13
LINC01339-204ENST00000524094 C19orf71A6NCJ1 209 aa1.75□□□□□ -2.13
LINC01339-204ENST00000524094 HIGD1CA8MV81 97 aa1.75□□□□□ -2.13
LINC01339-204ENST00000524094 TSTD3H0UI37 97 aa1.75□□□□□ -2.13
LINC01339-204ENST00000524094 K7EMT4 169 aa1.75□□□□□ -2.13
LINC01339-204ENST00000524094 M0R3E3 92 aa1.75□□□□□ -2.13
LINC01339-204ENST00000524094 OVOL1O14753 267 aa1.75□□□□□ -2.13
LINC01339-204ENST00000524094 SIVA1O15304 175 aa1.75□□□□□ -2.13
LINC01339-204ENST00000524094 ZNF207O43670 478 aaKnown RBP1.75□□□□□ -2.13
LINC01339-204ENST00000524094 IGKV2D-40P01614 121 aaPredicted RBP1.75□□□□□ -2.13
LINC01339-204ENST00000524094 IGLV2-8P01709 118 aa1.75□□□□□ -2.13
LINC01339-204ENST00000524094 ORM1P02763 201 aa1.75□□□□□ -2.13
LINC01339-204ENST00000524094 LGALS1P09382 135 aaKnown RBP1.75□□□□□ -2.13
LINC01339-204ENST00000524094 RAB4AP20338 218 aa1.75□□□□□ -2.13
LINC01339-204ENST00000524094 CBLN1P23435 193 aa1.75□□□□□ -2.13
LINC01339-204ENST00000524094 CMC4P56277 68 aaPredicted RBP1.75□□□□□ -2.13
LINC01339-204ENST00000524094 SNRPD3P62318 126 aaKnown RBP1.75□□□□□ -2.13
LINC01339-204ENST00000524094 BLCAPP62952 87 aa1.75□□□□□ -2.13
LINC01339-204ENST00000524094 IQCJQ1A5X6 159 aa1.75□□□□□ -2.13
LINC01339-204ENST00000524094 OR10J3Q5JRS4 329 aa1.75□□□□□ -2.13
LINC01339-204ENST00000524094 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.75□□□□□ -2.13
LINC01339-204ENST00000524094 HIST3H2BBQ8N257 126 aa1.75□□□□□ -2.13
LINC01339-204ENST00000524094 Q8N2B8 174 aa1.75□□□□□ -2.13
LINC01339-204ENST00000524094 SIGLECL1Q8N7X8 197 aa1.75□□□□□ -2.13
LINC01339-204ENST00000524094 NUP35Q8NFH5 326 aa1.75□□□□□ -2.13
LINC01339-204ENST00000524094 OR10D4PQ8NGN7 298 aa1.75□□□□□ -2.13
LINC01339-204ENST00000524094 PIFOQ8TCI5 191 aa1.75□□□□□ -2.13
LINC01339-204ENST00000524094 ZC2HC1AQ96GY0 325 aa1.75□□□□□ -2.13
LINC01339-204ENST00000524094 KCNS1Q96KK3 526 aa1.75□□□□□ -2.13
LINC01339-204ENST00000524094 UBE2E2Q96LR5 201 aa1.75□□□□□ -2.13
LINC01339-204ENST00000524094 RETNQ9HD89 108 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms