RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 MED28Q9H204 178 aa2.58□□□□□ -2
CPNE3-206ENST00000523469 UQCC1Q9NVA1 299 aa2.58□□□□□ -2
CPNE3-206ENST00000523469 ZNF492Q9P255 531 aa2.58□□□□□ -2
CPNE3-206ENST00000523469 LY96Q9Y6Y9 160 aa2.58□□□□□ -2
CPNE3-206ENST00000523469 IGHV3-21A0A0B4J1V1 117 aa2.57□□□□□ -2
CPNE3-206ENST00000523469 TRAV5A0A0B4J249 113 aa2.57□□□□□ -2
CPNE3-206ENST00000523469 TRAV26-2A0A0B4J265 109 aa2.57□□□□□ -2
CPNE3-206ENST00000523469 OR4C45A6NMZ5 311 aa2.57□□□□□ -2
CPNE3-206ENST00000523469 FXYD1O00168 92 aa2.57□□□□□ -2
CPNE3-206ENST00000523469 RGS5O15539 181 aa2.57□□□□□ -2
CPNE3-206ENST00000523469 APOMO95445 188 aa2.57□□□□□ -2
CPNE3-206ENST00000523469 CXorf1O96002 111 aa2.57□□□□□ -2
CPNE3-206ENST00000523469 MT-CO2P00403 227 aa2.57□□□□□ -2
CPNE3-206ENST00000523469 SAA1P0DJI8 122 aaPredicted RBP2.57□□□□□ -2
CPNE3-206ENST00000523469 EVI2AP22794 236 aa2.57□□□□□ -2
CPNE3-206ENST00000523469 S100GP29377 79 aa2.57□□□□□ -2
CPNE3-206ENST00000523469 RHOBP62745 196 aa2.57□□□□□ -2
CPNE3-206ENST00000523469 TMEM244Q5VVB8 128 aa2.57□□□□□ -2
CPNE3-206ENST00000523469 GOLT1AQ6ZVE7 132 aa2.57□□□□□ -2
CPNE3-206ENST00000523469 FAM107BQ9H098 131 aa2.57□□□□□ -2
CPNE3-206ENST00000523469 TVP23BQ9NYZ1 205 aa2.57□□□□□ -2
CPNE3-206ENST00000523469 SS18L2Q9UHA2 77 aa2.57□□□□□ -2
CPNE3-206ENST00000523469 ANAPC10Q9UM13 185 aa2.57□□□□□ -2
CPNE3-206ENST00000523469 TMEM56-RWDD3S4R434 201 aa2.57□□□□□ -2
CPNE3-206ENST00000523469 H3BMM0 161 aa2.56□□□□□ -2
CPNE3-206ENST00000523469 M0R381 172 aa2.56□□□□□ -2
CPNE3-206ENST00000523469 ARPC5O15511 151 aa2.56□□□□□ -2
CPNE3-206ENST00000523469 CRHBPP24387 322 aa2.56□□□□□ -2
CPNE3-206ENST00000523469 S100A2P29034 98 aa2.56□□□□□ -2
CPNE3-206ENST00000523469 OR10J1P30954 320 aa2.56□□□□□ -2
CPNE3-206ENST00000523469 KRTAP12-4P60329 112 aa2.56□□□□□ -2
CPNE3-206ENST00000523469 SNRPGP62308 76 aaKnown RBP2.56□□□□□ -2
CPNE3-206ENST00000523469 SNRPD3P62318 126 aaKnown RBP2.56□□□□□ -2
CPNE3-206ENST00000523469 FABP9Q0Z7S8 132 aa2.56□□□□□ -2
CPNE3-206ENST00000523469 DHRS2Q13268 280 aa2.56□□□□□ -2
CPNE3-206ENST00000523469 HMGN3Q15651 99 aa2.56□□□□□ -2
CPNE3-206ENST00000523469 AKR1C8PQ5T2L2 129 aa2.56□□□□□ -2
CPNE3-206ENST00000523469 TMEM78Q5T7P6 136 aa2.56□□□□□ -2
CPNE3-206ENST00000523469 ANKRD29Q8N6D5 301 aa2.56□□□□□ -2
CPNE3-206ENST00000523469 MRPL30Q8TCC3 161 aaKnown RBP2.56□□□□□ -2
CPNE3-206ENST00000523469 BORCS5Q969J3 196 aa2.56□□□□□ -2
CPNE3-206ENST00000523469 LINC01600Q96MT4 127 aa2.56□□□□□ -2
CPNE3-206ENST00000523469 LINC00467Q9BRT7 94 aa2.56□□□□□ -2
CPNE3-206ENST00000523469 GNG8Q9UK08 70 aa2.56□□□□□ -2
CPNE3-206ENST00000523469 PRNDQ9UKY0 176 aa2.56□□□□□ -2
CPNE3-206ENST00000523469 HSPB11Q9Y547 144 aa2.56□□□□□ -2
CPNE3-206ENST00000523469 R4GN34 69 aa2.56□□□□□ -2
CPNE3-206ENST00000523469 IGSF23A1L1A6 192 aa2.55□□□□□ -2
CPNE3-206ENST00000523469 C9JCJ5 164 aa2.55□□□□□ -2
CPNE3-206ENST00000523469 PPBPP02775 128 aa2.55□□□□□ -2
CPNE3-206ENST00000523469 HLA-DRB4P13762 266 aa2.55□□□□□ -2
CPNE3-206ENST00000523469 EIF2B2P49770 351 aaKnown RBP2.55□□□□□ -2
CPNE3-206ENST00000523469 RPS20P60866 119 aaKnown RBP2.55□□□□□ -2
CPNE3-206ENST00000523469 SPCS2Q15005 226 aa2.55□□□□□ -2
CPNE3-206ENST00000523469 WHAMMP3Q1A5X7 153 aa2.55□□□□□ -2
CPNE3-206ENST00000523469 C10orf126Q8N4M7 172 aa2.55□□□□□ -2
CPNE3-206ENST00000523469 GDPD1Q8N9F7 314 aa2.55□□□□□ -2
CPNE3-206ENST00000523469 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.55□□□□□ -2
CPNE3-206ENST00000523469 OR51A4Q8NGJ6 313 aa2.55□□□□□ -2
CPNE3-206ENST00000523469 OR5D14Q8NGL3 314 aa2.55□□□□□ -2
CPNE3-206ENST00000523469 TMEM167AQ8TBQ9 72 aa2.55□□□□□ -2
CPNE3-206ENST00000523469 CNBD2Q96M20 576 aa2.55□□□□□ -2
CPNE3-206ENST00000523469 TMEM147Q9BVK8 224 aa2.55□□□□□ -2
CPNE3-206ENST00000523469 OR2D2Q9H210 308 aa2.55□□□□□ -2
CPNE3-206ENST00000523469 SH3BGRL3Q9H299 93 aa2.55□□□□□ -2
CPNE3-206ENST00000523469 HLA-DRB4X5D2U9 266 aa2.55□□□□□ -2
CPNE3-206ENST00000523469 A0A096LPF7 62 aa2.54□□□□□ -2
CPNE3-206ENST00000523469 A0A0D9SG52 128 aa2.54□□□□□ -2
CPNE3-206ENST00000523469 MAP1LC3B2A6NCE7 125 aa2.54□□□□□ -2
CPNE3-206ENST00000523469 BBIP1A8MTZ0 92 aa2.54□□□□□ -2
CPNE3-206ENST00000523469 E7EUB6 86 aa2.54□□□□□ -2
CPNE3-206ENST00000523469 G3V2T6 193 aa2.54□□□□□ -2
CPNE3-206ENST00000523469 K7EP13 123 aa2.54□□□□□ -2
CPNE3-206ENST00000523469 LECT2O14960 151 aa2.54□□□□□ -2
CPNE3-206ENST00000523469 HMGB3O15347 200 aaKnown RBP2.54□□□□□ -2
CPNE3-206ENST00000523469 HRASP01112 189 aa2.54□□□□□ -2
CPNE3-206ENST00000523469 KRASP01116 189 aa2.54□□□□□ -2
CPNE3-206ENST00000523469 DAPP51397 102 aa2.54□□□□□ -2
CPNE3-206ENST00000523469 DEFA1P59665 94 aa2.54□□□□□ -2
CPNE3-206ENST00000523469 GNG5P63218 68 aa2.54□□□□□ -2
CPNE3-206ENST00000523469 TNFAIP8L3Q5GJ75 292 aa2.54□□□□□ -2
CPNE3-206ENST00000523469 ARPINQ7Z6K5 226 aa2.54□□□□□ -2
CPNE3-206ENST00000523469 DHFR2Q86XF0 187 aa2.54□□□□□ -2
CPNE3-206ENST00000523469 EIF4E3Q8N5X7 224 aaKnown RBP2.54□□□□□ -2
CPNE3-206ENST00000523469 VSTM2AQ8TAG5 236 aa2.54□□□□□ -2
CPNE3-206ENST00000523469 MAP1LC3BQ9GZQ8 125 aa2.54□□□□□ -2
CPNE3-206ENST00000523469 TMEM222Q9H0R3 208 aa2.54□□□□□ -2
CPNE3-206ENST00000523469 SLC35B3Q9H1N7 401 aa2.54□□□□□ -2
CPNE3-206ENST00000523469 LYRM2Q9NU23 88 aaPredicted RBP2.54□□□□□ -2
CPNE3-206ENST00000523469 RBM7Q9Y580 266 aaKnown RBP2.54□□□□□ -2
CPNE3-206ENST00000523469 H3BNG1 76 aa2.53□□□□□ -2
CPNE3-206ENST00000523469 GNG7O60262 68 aa2.53□□□□□ -2
CPNE3-206ENST00000523469 NAPSAO96009 420 aa2.53□□□□□ -2
CPNE3-206ENST00000523469 PRM2P04554 102 aa2.53□□□□□ -2
CPNE3-206ENST00000523469 CTSGP08311 255 aa2.53□□□□□ -2
CPNE3-206ENST00000523469 HTR1AP08908 422 aa2.53□□□□□ -2
CPNE3-206ENST00000523469 ZNF93P35789 620 aaPredicted RBP2.53□□□□□ -2
CPNE3-206ENST00000523469 PSG9Q00887 426 aa2.53□□□□□ -2
CPNE3-206ENST00000523469 KLK9Q2XQG4 91 aa2.53□□□□□ -2
CPNE3-206ENST00000523469 TMEM128Q5BJH2 165 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms