RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 TNFRSF6BO95407 300 aa9.37□□□□□ -0.91
CLK4-210ENST00000522136 PPBPP02775 128 aa9.37□□□□□ -0.91
CLK4-210ENST00000522136 OR10J3Q5JRS4 329 aa9.37□□□□□ -0.91
CLK4-210ENST00000522136 NEXN-AS1Q8NBZ9 246 aa9.37□□□□□ -0.91
CLK4-210ENST00000522136 H7C1H1 209 aa9.37□□□□□ -0.91
CLK4-210ENST00000522136 DEFB104AQ8WTQ1 72 aa9.37□□□□□ -0.91
CLK4-210ENST00000522136 NIT2Q9NQR4 276 aa9.37□□□□□ -0.91
CLK4-210ENST00000522136 TRAV10A0A0B4J240 114 aa9.36□□□□□ -0.91
CLK4-210ENST00000522136 GAGE12JA6NER3 117 aa9.36□□□□□ -0.91
CLK4-210ENST00000522136 GYPEP15421 78 aa9.36□□□□□ -0.91
CLK4-210ENST00000522136 GAGE1Q13065 139 aa9.36□□□□□ -0.91
CLK4-210ENST00000522136 GAGE4Q13068 117 aa9.36□□□□□ -0.91
CLK4-210ENST00000522136 GAGE5Q13069 117 aa9.36□□□□□ -0.91
CLK4-210ENST00000522136 RHOHQ15669 191 aa9.36□□□□□ -0.91
CLK4-210ENST00000522136 IQCJQ1A5X6 159 aa9.36□□□□□ -0.91
CLK4-210ENST00000522136 GAGE13Q4V321 117 aa9.36□□□□□ -0.91
CLK4-210ENST00000522136 ZNRF2Q8NHG8 242 aa9.36□□□□□ -0.91
CLK4-210ENST00000522136 PHLDA1Q8WV24 401 aaPredicted RBP9.36□□□□□ -0.91
CLK4-210ENST00000522136 PRADC1Q9BSG0 188 aa9.36□□□□□ -0.91
CLK4-210ENST00000522136 LOC389332A0A1B0GUA5 103 aa9.35□□□□□ -0.91
CLK4-210ENST00000522136 TGP01266 2768 aa9.35□□□□□ -0.91
CLK4-210ENST00000522136 NEGR1Q7Z3B1 354 aa9.35□□□□□ -0.91
CLK4-210ENST00000522136 TNFRSF18Q9Y5U5 241 aa9.35□□□□□ -0.91
CLK4-210ENST00000522136 TRBV10-1A0A0K0K1A3 114 aa9.34□□□□□ -0.91
CLK4-210ENST00000522136 C1orf196B1AJZ1 125 aa9.34□□□□□ -0.91
CLK4-210ENST00000522136 ST20Q9HBF5 79 aa9.34□□□□□ -0.91
CLK4-210ENST00000522136 TRBV7-3A0A075B6L6 115 aa9.33□□□□□ -0.92
CLK4-210ENST00000522136 IGHV3-38A0A0C4DH36 116 aa9.33□□□□□ -0.92
CLK4-210ENST00000522136 TRBV6-5A0A0K0K1A5 114 aa9.33□□□□□ -0.92
CLK4-210ENST00000522136 HIST1H2BKO60814 126 aa9.33□□□□□ -0.92
CLK4-210ENST00000522136 HIST1H2BJP06899 126 aa9.33□□□□□ -0.92
CLK4-210ENST00000522136 HIST1H2BOP23527 126 aa9.33□□□□□ -0.92
CLK4-210ENST00000522136 HIST1H2BBP33778 126 aa9.33□□□□□ -0.92
CLK4-210ENST00000522136 HIST1H2BDP58876 126 aa9.33□□□□□ -0.92
CLK4-210ENST00000522136 SUMO2P61956 95 aaKnown RBP9.33□□□□□ -0.92
CLK4-210ENST00000522136 HIST1H2BCP62807 126 aa9.33□□□□□ -0.92
CLK4-210ENST00000522136 RPL36AP83881 106 aaKnown RBP9.33□□□□□ -0.92
CLK4-210ENST00000522136 HIST2H2BEQ16778 126 aa9.33□□□□□ -0.92
CLK4-210ENST00000522136 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.33□□□□□ -0.92
CLK4-210ENST00000522136 C18orf32Q8TCD1 76 aa9.33□□□□□ -0.92
CLK4-210ENST00000522136 HIST1H2BHQ93079 126 aa9.33□□□□□ -0.92
CLK4-210ENST00000522136 RPL36ALQ969Q0 106 aaKnown RBP9.33□□□□□ -0.92
CLK4-210ENST00000522136 HIST1H2BNQ99877 126 aa9.33□□□□□ -0.92
CLK4-210ENST00000522136 HIST1H2BMQ99879 126 aa9.33□□□□□ -0.92
CLK4-210ENST00000522136 A0A096LPF7 62 aa9.33□□□□□ -0.92
CLK4-210ENST00000522136 SDHAF1A6NFY7 115 aa9.33□□□□□ -0.92
CLK4-210ENST00000522136 DNAJC30Q96LL9 226 aa9.33□□□□□ -0.92
CLK4-210ENST00000522136 TMEM70Q9BUB7 260 aa9.33□□□□□ -0.92
CLK4-210ENST00000522136 LAMTOR2Q9Y2Q5 125 aa9.33□□□□□ -0.92
CLK4-210ENST00000522136 PPP1R17O96001 155 aa9.32□□□□□ -0.92
CLK4-210ENST00000522136 POLR2KP53803 58 aaKnown RBP9.32□□□□□ -0.92
CLK4-210ENST00000522136 MAP1LC3AQ9H492 121 aa9.32□□□□□ -0.92
CLK4-210ENST00000522136 IFI27P40305 119 aaPredicted RBP9.32□□□□□ -0.92
CLK4-210ENST00000522136 UBE2D3P61077 147 aa9.32□□□□□ -0.92
CLK4-210ENST00000522136 UBE2D2P62837 147 aa9.32□□□□□ -0.92
CLK4-210ENST00000522136 C20orf78Q9BR46 151 aa9.32□□□□□ -0.92
CLK4-210ENST00000522136 IGLL5B9A064 214 aa9.31□□□□□ -0.92
CLK4-210ENST00000522136 LINC00694P0DN24 101 aa9.31□□□□□ -0.92
CLK4-210ENST00000522136 SMIM2Q9BVW6 85 aa9.31□□□□□ -0.92
CLK4-210ENST00000522136 IGLV2-18A0A075B6J9 118 aa9.3□□□□□ -0.92
CLK4-210ENST00000522136 PRSS47A8MTI9 375 aa9.3□□□□□ -0.92
CLK4-210ENST00000522136 NUDT3O95989 172 aa9.3□□□□□ -0.92
CLK4-210ENST00000522136 ICOSQ9Y6W8 199 aa9.3□□□□□ -0.92
CLK4-210ENST00000522136 PMCHP20382 165 aa9.3□□□□□ -0.92
CLK4-210ENST00000522136 PRSS3P2Q8NHM4 247 aa9.3□□□□□ -0.92
CLK4-210ENST00000522136 URB1-AS1Q96HZ7 61 aa9.3□□□□□ -0.92
CLK4-210ENST00000522136 TRBV27A0A0K0K1C4 114 aa9.29□□□□□ -0.92
CLK4-210ENST00000522136 H3BNG1 76 aa9.29□□□□□ -0.92
CLK4-210ENST00000522136 VCYO14598 125 aa9.29□□□□□ -0.92
CLK4-210ENST00000522136 TCAPO15273 167 aa9.29□□□□□ -0.92
CLK4-210ENST00000522136 RAB5BP61020 215 aa9.29□□□□□ -0.92
CLK4-210ENST00000522136 MRPL23Q16540 153 aaKnown RBP9.29□□□□□ -0.92
CLK4-210ENST00000522136 CEMP1Q6PRD7 247 aaPredicted RBP9.29□□□□□ -0.92
CLK4-210ENST00000522136 ATP6V0E2Q8NHE4 81 aa9.29□□□□□ -0.92
CLK4-210ENST00000522136 NDUFA6P56556 154 aa9.28□□□□□ -0.92
CLK4-210ENST00000522136 Q0VG73 95 aa9.28□□□□□ -0.92
CLK4-210ENST00000522136 ZFAND6Q6FIF0 208 aa9.28□□□□□ -0.92
CLK4-210ENST00000522136 NIT1Q86X76 327 aa9.28□□□□□ -0.92
CLK4-210ENST00000522136 BAGE3Q86Y29 109 aa9.28□□□□□ -0.92
CLK4-210ENST00000522136 Q8N8P6 123 aa9.28□□□□□ -0.92
CLK4-210ENST00000522136 TMA7Q9Y2S6 64 aaKnown RBP9.28□□□□□ -0.92
CLK4-210ENST00000522136 I3L3M4 83 aa9.28□□□□□ -0.92
CLK4-210ENST00000522136 RPL32P62910 135 aaKnown RBP9.28□□□□□ -0.92
CLK4-210ENST00000522136 NUPR1O60356 82 aa9.27□□□□□ -0.93
CLK4-210ENST00000522136 TSHBP01222 138 aa9.27□□□□□ -0.93
CLK4-210ENST00000522136 LINC00310P59036 64 aa9.27□□□□□ -0.93
CLK4-210ENST00000522136 NTM-AS1Q6ZSK4 140 aa9.27□□□□□ -0.93
CLK4-210ENST00000522136 DAZ4Q86SG3 579 aaKnown RBP9.27□□□□□ -0.93
CLK4-210ENST00000522136 NXT2Q9NPJ8 142 aaKnown RBP9.27□□□□□ -0.93
CLK4-210ENST00000522136 DAZ3Q9NR90 486 aaKnown RBP9.27□□□□□ -0.93
CLK4-210ENST00000522136 SERF1AO75920 110 aa9.26□□□□□ -0.93
CLK4-210ENST00000522136 LINC00614P0C842 121 aa9.26□□□□□ -0.93
CLK4-210ENST00000522136 RNASEKQ6P5S7 137 aaKnown RBP9.26□□□□□ -0.93
CLK4-210ENST00000522136 FA2HQ7L5A8 372 aa9.26□□□□□ -0.93
CLK4-210ENST00000522136 WWC2-AS2Q96NR7 200 aa9.26□□□□□ -0.93
CLK4-210ENST00000522136 COTL1Q14019 142 aa9.26□□□□□ -0.93
CLK4-210ENST00000522136 MUC7Q8TAX7 377 aa9.26□□□□□ -0.93
CLK4-210ENST00000522136 KIR2DL4Q99706 377 aa9.26□□□□□ -0.93
CLK4-210ENST00000522136 NUPR2A6NF83 97 aa9.25□□□□□ -0.93
CLK4-210ENST00000522136 FCER1GP30273 86 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms