RNA–Protein interactions for RNA: ENST00000521425.5

TRAM1-205, Transcript of translocation associated membrane protein 1, humanhuman

TSL 2 BASIC

Gene TRAM1, Length 3,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-205ENST00000521425 MDFICQ9P1T7 246 aa13.15□□□□□ -0.3
TRAM1-205ENST00000521425 ZNF575Q86XF7 245 aa13.14□□□□□ -0.31
TRAM1-205ENST00000521425 SCGB3A1Q96QR1 104 aa13.14□□□□□ -0.31
TRAM1-205ENST00000521425 IGHG2P01859 326 aa13.14□□□□□ -0.31
TRAM1-205ENST00000521425 HLA-DRB4P13762 266 aa13.14□□□□□ -0.31
TRAM1-205ENST00000521425 HLA-DRB4X5D2U9 266 aa13.14□□□□□ -0.31
TRAM1-205ENST00000521425 M0QXV9 152 aa13.14□□□□□ -0.31
TRAM1-205ENST00000521425 C9orf139Q6ZV77 190 aa13.14□□□□□ -0.31
TRAM1-205ENST00000521425 CARD19Q96LW7 228 aa13.14□□□□□ -0.31
TRAM1-205ENST00000521425 IGHV4OR15-8A0A075B7B6 117 aa13.13□□□□□ -0.31
TRAM1-205ENST00000521425 A0A087WW49 117 aa13.13□□□□□ -0.31
TRAM1-205ENST00000521425 TRAV4A0A0B4J268 109 aa13.13□□□□□ -0.31
TRAM1-205ENST00000521425 TRAV21A0A0B4J279 112 aa13.13□□□□□ -0.31
TRAM1-205ENST00000521425 FAM223BA6NKX1 122 aa13.13□□□□□ -0.31
TRAM1-205ENST00000521425 RPL39P62891 51 aaKnown RBP13.13□□□□□ -0.31
TRAM1-205ENST00000521425 APRG1Q8IVJ8 170 aa13.13□□□□□ -0.31
TRAM1-205ENST00000521425 FAM223AQ8IWN6 122 aa13.13□□□□□ -0.31
TRAM1-205ENST00000521425 OPRPNQ99935 248 aaPredicted RBP13.13□□□□□ -0.31
TRAM1-205ENST00000521425 MUC4Q99102 2169 aa13.13□□□□□ -0.31
TRAM1-205ENST00000521425 IGHV7-4-1A0A0J9YVY3 117 aa13.13□□□□□ -0.31
TRAM1-205ENST00000521425 A6NDX4 124 aa13.13□□□□□ -0.31
TRAM1-205ENST00000521425 MEIG1Q5JSS6 88 aa13.13□□□□□ -0.31
TRAM1-205ENST00000521425 NHLRC4P0CG21 123 aaPredicted RBP13.12□□□□□ -0.31
TRAM1-205ENST00000521425 PPDPFLQ8WWR9 84 aa13.12□□□□□ -0.31
TRAM1-205ENST00000521425 DPM2O94777 84 aa13.12□□□□□ -0.31
TRAM1-205ENST00000521425 ZFAND2AQ8N6M9 145 aa13.12□□□□□ -0.31
TRAM1-205ENST00000521425 KLHL30-AS1Q8NEE0 82 aa13.12□□□□□ -0.31
TRAM1-205ENST00000521425 IGHV3-16A0A0C4DH30 117 aa13.12□□□□□ -0.31
TRAM1-205ENST00000521425 NDUFV3P56181 108 aaKnown RBP13.12□□□□□ -0.31
TRAM1-205ENST00000521425 NDUFA4O00483 81 aa13.11□□□□□ -0.31
TRAM1-205ENST00000521425 CRLF1O75462 422 aa13.11□□□□□ -0.31
TRAM1-205ENST00000521425 DEFB131AP59861 70 aa13.11□□□□□ -0.31
TRAM1-205ENST00000521425 HHLA3Q9XRX5 114 aa13.11□□□□□ -0.31
TRAM1-205ENST00000521425 MRPL23Q16540 153 aaKnown RBP13.11□□□□□ -0.31
TRAM1-205ENST00000521425 CFAP126Q5VTH2 177 aa13.11□□□□□ -0.31
TRAM1-205ENST00000521425 UBE2E2Q96LR5 201 aa13.11□□□□□ -0.31
TRAM1-205ENST00000521425 LAGE3Q14657 143 aa13.1□□□□□ -0.31
TRAM1-205ENST00000521425 LINC01559Q495D7 138 aa13.1□□□□□ -0.31
TRAM1-205ENST00000521425 ZNF493Q6ZR52 646 aa13.1□□□□□ -0.31
TRAM1-205ENST00000521425 TMEM190Q8WZ59 177 aa13.1□□□□□ -0.31
TRAM1-205ENST00000521425 A8MWV9 139 aa13.1□□□□□ -0.31
TRAM1-205ENST00000521425 P0DMU3 169 aa13.1□□□□□ -0.31
TRAM1-205ENST00000521425 FAM231AP0DMU4 169 aa13.1□□□□□ -0.31
TRAM1-205ENST00000521425 FAM231CP0DMU5 169 aa13.1□□□□□ -0.31
TRAM1-205ENST00000521425 LINC01356Q8N9X3 169 aa13.1□□□□□ -0.31
TRAM1-205ENST00000521425 HOXD3P31249 432 aaPredicted RBP13.09□□□□□ -0.31
TRAM1-205ENST00000521425 ANKRD29Q8N6D5 301 aa13.09□□□□□ -0.31
TRAM1-205ENST00000521425 HIGD1BQ9P298 99 aa13.09□□□□□ -0.31
TRAM1-205ENST00000521425 IFITM1P13164 125 aa13.09□□□□□ -0.31
TRAM1-205ENST00000521425 PROK1P58294 105 aa13.08□□□□□ -0.32
TRAM1-205ENST00000521425 WFDC11Q8NEX6 87 aa13.08□□□□□ -0.32
TRAM1-205ENST00000521425 NXT2Q9NPJ8 142 aaKnown RBP13.08□□□□□ -0.32
TRAM1-205ENST00000521425 GATD1Q8NB37 220 aa13.07□□□□□ -0.32
TRAM1-205ENST00000521425 SUMO2P61956 95 aaKnown RBP13.07□□□□□ -0.32
TRAM1-205ENST00000521425 TMEM170BQ5T4T1 132 aa13.07□□□□□ -0.32
TRAM1-205ENST00000521425 MORN3Q6PF18 240 aaPredicted RBP13.07□□□□□ -0.32
TRAM1-205ENST00000521425 USMG5Q96IX5 58 aa13.07□□□□□ -0.32
TRAM1-205ENST00000521425 IGHV3-38A0A0C4DH36 116 aa13.07□□□□□ -0.32
TRAM1-205ENST00000521425 DUSP14O95147 198 aaKnown RBP13.07□□□□□ -0.32
TRAM1-205ENST00000521425 C9orf47Q6ZRZ4 202 aa13.07□□□□□ -0.32
TRAM1-205ENST00000521425 TNFRSF18Q9Y5U5 241 aa13.07□□□□□ -0.32
TRAM1-205ENST00000521425 SNRPD3P62318 126 aaKnown RBP13.06□□□□□ -0.32
TRAM1-205ENST00000521425 TEN1Q86WV5 123 aa13.06□□□□□ -0.32
TRAM1-205ENST00000521425 IGHV3-53P01767 116 aa13.06□□□□□ -0.32
TRAM1-205ENST00000521425 ZNF876PQ49A33 203 aa13.06□□□□□ -0.32
TRAM1-205ENST00000521425 C9JAW5 83 aa13.05□□□□□ -0.32
TRAM1-205ENST00000521425 C2orf66Q6UXQ4 117 aa13.05□□□□□ -0.32
TRAM1-205ENST00000521425 Q8N1Y9 231 aa13.05□□□□□ -0.32
TRAM1-205ENST00000521425 DYNLRB2Q8TF09 96 aa13.05□□□□□ -0.32
TRAM1-205ENST00000521425 RAX2Q96IS3 184 aa13.05□□□□□ -0.32
TRAM1-205ENST00000521425 OVOL1O14753 267 aa13.05□□□□□ -0.32
TRAM1-205ENST00000521425 RASL10AQ92737 203 aa13.04□□□□□ -0.32
TRAM1-205ENST00000521425 XCL2Q9UBD3 114 aa13.04□□□□□ -0.32
TRAM1-205ENST00000521425 TRBV6-1A0A0K0K1D8 114 aa13.04□□□□□ -0.32
TRAM1-205ENST00000521425 NPC2P61916 151 aa13.04□□□□□ -0.32
TRAM1-205ENST00000521425 CEMP1Q6PRD7 247 aaPredicted RBP13.04□□□□□ -0.32
TRAM1-205ENST00000521425 TCL1BO95988 128 aa13.04□□□□□ -0.32
TRAM1-205ENST00000521425 Q9UF83 564 aa13.04□□□□□ -0.32
TRAM1-205ENST00000521425 ZNF815PA8K554 130 aa13.03□□□□□ -0.32
TRAM1-205ENST00000521425 ADARB2-AS1A8MUL3 147 aa13.03□□□□□ -0.32
TRAM1-205ENST00000521425 RNASE3P12724 160 aaKnown RBP13.03□□□□□ -0.32
TRAM1-205ENST00000521425 Q8N8P6 123 aa13.03□□□□□ -0.32
TRAM1-205ENST00000521425 SMIM2Q9BVW6 85 aa13.03□□□□□ -0.32
TRAM1-205ENST00000521425 DPH3P1Q9H4G8 78 aa13.03□□□□□ -0.32
TRAM1-205ENST00000521425 TP53TG1Q9Y2A0 90 aa13.03□□□□□ -0.32
TRAM1-205ENST00000521425 SLC25A16P16260 332 aa13.03□□□□□ -0.32
TRAM1-205ENST00000521425 ZNF843Q8N446 348 aa13.03□□□□□ -0.32
TRAM1-205ENST00000521425 VPREB3Q9UKI3 123 aa13.03□□□□□ -0.32
TRAM1-205ENST00000521425 NRACQ8N912 160 aa13.02□□□□□ -0.32
TRAM1-205ENST00000521425 VWFP04275 2813 aa13.02□□□□□ -0.33
TRAM1-205ENST00000521425 CHCHD5Q9BSY4 110 aa13.01□□□□□ -0.33
TRAM1-205ENST00000521425 U3KQE9 123 aa13.01□□□□□ -0.33
TRAM1-205ENST00000521425 A0A0U1RRA0 63 aa13□□□□□ -0.33
TRAM1-205ENST00000521425 SDHAF1A6NFY7 115 aa13□□□□□ -0.33
TRAM1-205ENST00000521425 TMEM262E9PQX1 116 aa13□□□□□ -0.33
TRAM1-205ENST00000521425 RHODO00212 210 aa13□□□□□ -0.33
TRAM1-205ENST00000521425 CFHR3Q02985 330 aa13□□□□□ -0.33
TRAM1-205ENST00000521425 Q1RN00 199 aa13□□□□□ -0.33
TRAM1-205ENST00000521425 TRPT1Q86TN4 253 aaKnown RBP13□□□□□ -0.33
TRAM1-205ENST00000521425 C15orf53Q8NAA6 179 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms