RNA–Protein interactions for RNA: ENST00000515011.5

PDE4D-223, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,175 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-223ENST00000515011 H7C1H1 209 aa16.66■□□□□ 0.26
PDE4D-223ENST00000515011 IGLV1-51P01701 117 aa16.66■□□□□ 0.26
PDE4D-223ENST00000515011 PLNP26678 52 aa16.66■□□□□ 0.26
PDE4D-223ENST00000515011 TCTAP57738 103 aa16.66■□□□□ 0.26
PDE4D-223ENST00000515011 A8MWV9 139 aa16.65■□□□□ 0.26
PDE4D-223ENST00000515011 F8VRH5 84 aa16.65■□□□□ 0.26
PDE4D-223ENST00000515011 RIPPLY3P57055 190 aa16.65■□□□□ 0.26
PDE4D-223ENST00000515011 NMUP48645 174 aa16.65■□□□□ 0.26
PDE4D-223ENST00000515011 C12orf54Q6X4T0 127 aa16.65■□□□□ 0.26
PDE4D-223ENST00000515011 BAALCQ8WXS3 180 aa16.65■□□□□ 0.26
PDE4D-223ENST00000515011 XCL2Q9UBD3 114 aa16.65■□□□□ 0.26
PDE4D-223ENST00000515011 UFSP1Q6NVU6 142 aa16.64■□□□□ 0.25
PDE4D-223ENST00000515011 SPXQ9BT56 116 aa16.64■□□□□ 0.25
PDE4D-223ENST00000515011 ZC2HC1BQ5TFG8 222 aa16.64■□□□□ 0.25
PDE4D-223ENST00000515011 ZMAT5Q9UDW3 170 aaKnown RBP16.64■□□□□ 0.25
PDE4D-223ENST00000515011 TP53TG1Q9Y2A0 90 aa16.64■□□□□ 0.25
PDE4D-223ENST00000515011 BVES-AS1Q5T3Y7 98 aa16.63■□□□□ 0.25
PDE4D-223ENST00000515011 PCP2Q8IVA1 136 aa16.63■□□□□ 0.25
PDE4D-223ENST00000515011 FAM110AQ9BQ89 295 aa16.63■□□□□ 0.25
PDE4D-223ENST00000515011 CHTOPQ9Y3Y2 248 aaKnown RBP16.63■□□□□ 0.25
PDE4D-223ENST00000515011 WNK1Q9H4A3 2382 aa16.63■□□□□ 0.25
PDE4D-223ENST00000515011 KRTAP10-3P60369 221 aa16.62■□□□□ 0.25
PDE4D-223ENST00000515011 NDUFA11Q86Y39 141 aa16.62■□□□□ 0.25
PDE4D-223ENST00000515011 LINC00469Q8N7U9 141 aa16.62■□□□□ 0.25
PDE4D-223ENST00000515011 IGKV2D-26A0A0A0MRZ7 120 aa16.62■□□□□ 0.25
PDE4D-223ENST00000515011 SIVA1O15304 175 aa16.62■□□□□ 0.25
PDE4D-223ENST00000515011 C1orf158Q8N1D5 194 aa16.62■□□□□ 0.25
PDE4D-223ENST00000515011 IGIPA6NJ69 53 aa16.61■□□□□ 0.25
PDE4D-223ENST00000515011 RHOHQ15669 191 aa16.61■□□□□ 0.25
PDE4D-223ENST00000515011 GTSCR1Q86UQ5 136 aa16.61■□□□□ 0.25
PDE4D-223ENST00000515011 BEAN1Q3B7T3 259 aa16.6■□□□□ 0.25
PDE4D-223ENST00000515011 INAFM1C9JVW0 142 aa16.6■□□□□ 0.25
PDE4D-223ENST00000515011 DEFB104AQ8WTQ1 72 aa16.6■□□□□ 0.25
PDE4D-223ENST00000515011 TMEM208Q9BTX3 173 aa16.6■□□□□ 0.25
PDE4D-223ENST00000515011 TSHBP01222 138 aa16.59■□□□□ 0.25
PDE4D-223ENST00000515011 CFAP126Q5VTH2 177 aa16.59■□□□□ 0.25
PDE4D-223ENST00000515011 TMEM141Q96I45 108 aa16.59■□□□□ 0.25
PDE4D-223ENST00000515011 TIMM17AQ99595 171 aa16.59■□□□□ 0.25
PDE4D-223ENST00000515011 IGHV3-73A0A0B4J1V6 119 aa16.58■□□□□ 0.25
PDE4D-223ENST00000515011 PRSS29PA6NIE9 313 aa16.58■□□□□ 0.25
PDE4D-223ENST00000515011 I3L3M4 83 aa16.58■□□□□ 0.25
PDE4D-223ENST00000515011 RPL39P62891 51 aaKnown RBP16.58■□□□□ 0.25
PDE4D-223ENST00000515011 C19orf73Q9NVV2 129 aa16.58■□□□□ 0.25
PDE4D-223ENST00000515011 RHODO00212 210 aa16.58■□□□□ 0.24
PDE4D-223ENST00000515011 ZNF25P17030 456 aaPredicted RBP16.58■□□□□ 0.24
PDE4D-223ENST00000515011 IL17DQ8TAD2 202 aa16.58■□□□□ 0.24
PDE4D-223ENST00000515011 AZU1P20160 251 aa16.57■□□□□ 0.24
PDE4D-223ENST00000515011 MRPL16Q9NX20 251 aaKnown RBP16.57■□□□□ 0.24
PDE4D-223ENST00000515011 RS1O15537 224 aa16.55■□□□□ 0.24
PDE4D-223ENST00000515011 TMEM97Q5BJF2 176 aa16.55■□□□□ 0.24
PDE4D-223ENST00000515011 NACAE9PAV3 2078 aa16.55■□□□□ 0.24
PDE4D-223ENST00000515011 SETD2Q9BYW2 2564 aaPredicted RBP16.55■□□□□ 0.24
PDE4D-223ENST00000515011 IGHV3OR16-12A0A075B7B8 117 aa16.54■□□□□ 0.24
PDE4D-223ENST00000515011 P0DMU3 169 aa16.54■□□□□ 0.24
PDE4D-223ENST00000515011 FAM231AP0DMU4 169 aa16.54■□□□□ 0.24
PDE4D-223ENST00000515011 FAM231CP0DMU5 169 aa16.54■□□□□ 0.24
PDE4D-223ENST00000515011 MAST4O15021 2626 aa16.54■□□□□ 0.24
PDE4D-223ENST00000515011 GIG44P09565 113 aaPredicted RBP16.54■□□□□ 0.24
PDE4D-223ENST00000515011 PMVKQ15126 192 aa16.54■□□□□ 0.24
PDE4D-223ENST00000515011 Q6ZSN1 163 aa16.54■□□□□ 0.24
PDE4D-223ENST00000515011 RNASE8Q8TDE3 154 aaKnown RBP16.54■□□□□ 0.24
PDE4D-223ENST00000515011 WFDC10AQ9H1F0 79 aa16.54■□□□□ 0.24
PDE4D-223ENST00000515011 HSD52Q0P140 79 aa16.53■□□□□ 0.24
PDE4D-223ENST00000515011 LINC00482Q8N8I6 264 aa16.53■□□□□ 0.24
PDE4D-223ENST00000515011 C20orf203Q8NBC4 194 aa16.53■□□□□ 0.24
PDE4D-223ENST00000515011 TTTY13Q9BZ97 58 aa16.53■□□□□ 0.24
PDE4D-223ENST00000515011 PF4P02776 101 aa16.53■□□□□ 0.24
PDE4D-223ENST00000515011 HIGD1BQ9P298 99 aa16.53■□□□□ 0.24
PDE4D-223ENST00000515011 IGHV3-53P01767 116 aa16.52■□□□□ 0.24
PDE4D-223ENST00000515011 TMEM263Q8WUH6 116 aaKnown RBP16.51■□□□□ 0.23
PDE4D-223ENST00000515011 CST9LQ9H4G1 147 aa16.51■□□□□ 0.23
PDE4D-223ENST00000515011 TNFRSF18Q9Y5U5 241 aa16.51■□□□□ 0.23
PDE4D-223ENST00000515011 COX11Q9Y6N1 276 aa16.51■□□□□ 0.23
PDE4D-223ENST00000515011 FOSL1P15407 271 aa16.51■□□□□ 0.23
PDE4D-223ENST00000515011 GAGE1Q13065 139 aa16.51■□□□□ 0.23
PDE4D-223ENST00000515011 IGLV4-69A0A075B6H9 119 aa16.5■□□□□ 0.23
PDE4D-223ENST00000515011 SEC11AP67812 179 aa16.5■□□□□ 0.23
PDE4D-223ENST00000515011 ORAOV1Q8WV07 137 aa16.5■□□□□ 0.23
PDE4D-223ENST00000515011 HIVEP1P15822 2718 aa16.5■□□□□ 0.23
PDE4D-223ENST00000515011 PAPPA-AS1Q5QFB9 102 aa16.49■□□□□ 0.23
PDE4D-223ENST00000515011 DNAJC30Q96LL9 226 aa16.49■□□□□ 0.23
PDE4D-223ENST00000515011 Q6ZVH6 145 aa16.48■□□□□ 0.23
PDE4D-223ENST00000515011 TAX1BP3O14907 124 aa16.48■□□□□ 0.23
PDE4D-223ENST00000515011 TRBV25-1A0A075B6N4 114 aa16.47■□□□□ 0.23
PDE4D-223ENST00000515011 RPL35AP18077 110 aaKnown RBP16.47■□□□□ 0.23
PDE4D-223ENST00000515011 C1QTNF4Q9BXJ3 329 aa16.47■□□□□ 0.23
PDE4D-223ENST00000515011 Q9UF83 564 aa16.47■□□□□ 0.23
PDE4D-223ENST00000515011 TRGV1A0A0A0MS02 117 aa16.47■□□□□ 0.23
PDE4D-223ENST00000515011 TRAV8-6A0A0B4J262 113 aa16.47■□□□□ 0.23
PDE4D-223ENST00000515011 C11orf86A6NJI1 115 aa16.47■□□□□ 0.23
PDE4D-223ENST00000515011 E9PLD3 99 aa16.47■□□□□ 0.23
PDE4D-223ENST00000515011 MAPKAPK5-AS1Q8N8E1 139 aa16.47■□□□□ 0.23
PDE4D-223ENST00000515011 OR11H2Q8NH07 326 aa16.46■□□□□ 0.23
PDE4D-223ENST00000515011 CHAC1Q9BUX1 264 aa16.45■□□□□ 0.22
PDE4D-223ENST00000515011 CSNK1G2-AS1Q8NCQ2 148 aa16.45■□□□□ 0.22
PDE4D-223ENST00000515011 CRLF1O75462 422 aa16.44■□□□□ 0.22
PDE4D-223ENST00000515011 OR4C5Q8NGB2 326 aa16.44■□□□□ 0.22
PDE4D-223ENST00000515011 DAZ2Q13117 558 aaKnown RBP16.44■□□□□ 0.22
PDE4D-223ENST00000515011 C16orf74Q96GX8 76 aa16.44■□□□□ 0.22
PDE4D-223ENST00000515011 Q6ZTI0 123 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms