RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 MUC21Q5SSG8 566 aa5.92□□□□□ -1.46
CCL28-204ENST00000514421 SPANXN1Q5VSR9 72 aa5.92□□□□□ -1.46
CCL28-204ENST00000514421 FAM159AQ6UWV7 190 aa5.92□□□□□ -1.46
CCL28-204ENST00000514421 Q6ZTC4 211 aa5.92□□□□□ -1.46
CCL28-204ENST00000514421 SMIM15Q7Z3B0 74 aa5.92□□□□□ -1.46
CCL28-204ENST00000514421 SPATA12Q7Z6I5 190 aa5.92□□□□□ -1.46
CCL28-204ENST00000514421 NRACQ8N912 160 aa5.92□□□□□ -1.46
CCL28-204ENST00000514421 TMEM263Q8WUH6 116 aaKnown RBP5.92□□□□□ -1.46
CCL28-204ENST00000514421 PTH2Q96A98 100 aa5.92□□□□□ -1.46
CCL28-204ENST00000514421 TIMM8BQ9Y5J9 83 aaPredicted RBP5.92□□□□□ -1.46
CCL28-204ENST00000514421 SACSQ9NZJ4 4579 aa5.92□□□□□ -1.46
CCL28-204ENST00000514421 KMT2CQ8NEZ4 4911 aaKnown RBP5.91□□□□□ -1.46
CCL28-204ENST00000514421 IGHV1OR15-1A0A075B7D0 117 aa5.91□□□□□ -1.46
CCL28-204ENST00000514421 DEFB131BA0A096LNP1 70 aa5.91□□□□□ -1.46
CCL28-204ENST00000514421 PLAC8L1A1L4L8 177 aa5.91□□□□□ -1.46
CCL28-204ENST00000514421 K7EMI3 77 aa5.91□□□□□ -1.46
CCL28-204ENST00000514421 TNFRSF6BO95407 300 aa5.91□□□□□ -1.46
CCL28-204ENST00000514421 SCGB1D1O95968 90 aa5.91□□□□□ -1.46
CCL28-204ENST00000514421 BTF3P20290 206 aaKnown RBP5.91□□□□□ -1.46
CCL28-204ENST00000514421 S100A4P26447 101 aaKnown RBP5.91□□□□□ -1.46
CCL28-204ENST00000514421 IFI27P40305 119 aaPredicted RBP5.91□□□□□ -1.46
CCL28-204ENST00000514421 TCTAP57738 103 aa5.91□□□□□ -1.46
CCL28-204ENST00000514421 LINC00315P59091 139 aa5.91□□□□□ -1.46
CCL28-204ENST00000514421 DAD1P61803 113 aa5.91□□□□□ -1.46
CCL28-204ENST00000514421 RPL32P62910 135 aaKnown RBP5.91□□□□□ -1.46
CCL28-204ENST00000514421 ZNF664Q8N3J9 261 aa5.91□□□□□ -1.46
CCL28-204ENST00000514421 PRSS3P2Q8NHM4 247 aa5.91□□□□□ -1.46
CCL28-204ENST00000514421 RNASE8Q8TDE3 154 aaKnown RBP5.91□□□□□ -1.46
CCL28-204ENST00000514421 DPH3P1Q9H4G8 78 aa5.91□□□□□ -1.46
CCL28-204ENST00000514421 NXT2Q9NPJ8 142 aaKnown RBP5.91□□□□□ -1.46
CCL28-204ENST00000514421 PHLDA3Q9Y5J5 127 aa5.91□□□□□ -1.46
CCL28-204ENST00000514421 CSMD3Q7Z407 3707 aa5.9□□□□□ -1.46
CCL28-204ENST00000514421 CBY3A6NI87 242 aa5.9□□□□□ -1.46
CCL28-204ENST00000514421 TSTD3H0UI37 97 aa5.9□□□□□ -1.46
CCL28-204ENST00000514421 LEPROTL1O95214 131 aa5.9□□□□□ -1.46
CCL28-204ENST00000514421 PPP1R17O96001 155 aa5.9□□□□□ -1.46
CCL28-204ENST00000514421 DEFB130BP0DP73 79 aa5.9□□□□□ -1.46
CCL28-204ENST00000514421 DEFB130AP0DP74 79 aa5.9□□□□□ -1.46
CCL28-204ENST00000514421 PMCHL1Q16048 86 aa5.9□□□□□ -1.46
CCL28-204ENST00000514421 FA2HQ7L5A8 372 aa5.9□□□□□ -1.46
CCL28-204ENST00000514421 AP1S3Q96PC3 154 aa5.9□□□□□ -1.46
CCL28-204ENST00000514421 C20orf78Q9BR46 151 aa5.9□□□□□ -1.46
CCL28-204ENST00000514421 TMEM70Q9BUB7 260 aa5.9□□□□□ -1.46
CCL28-204ENST00000514421 MAP1LC3AQ9H492 121 aa5.9□□□□□ -1.46
CCL28-204ENST00000514421 NOP10Q9NPE3 64 aaKnown RBP5.9□□□□□ -1.46
CCL28-204ENST00000514421 HSPB8Q9UJY1 196 aa5.9□□□□□ -1.46
CCL28-204ENST00000514421 DNAH1Q9P2D7 4330 aa5.9□□□□□ -1.47
CCL28-204ENST00000514421 TRGV11A0A075B6L2 103 aa5.89□□□□□ -1.47
CCL28-204ENST00000514421 KRTAP9-6A0A140TA67 174 aa5.89□□□□□ -1.47
CCL28-204ENST00000514421 LCE6AA0A183 80 aa5.89□□□□□ -1.47
CCL28-204ENST00000514421 PCP4L1A6NKN8 68 aa5.89□□□□□ -1.47
CCL28-204ENST00000514421 IGLL5B9A064 214 aa5.89□□□□□ -1.47
CCL28-204ENST00000514421 SMKR1H3BMG3 65 aa5.89□□□□□ -1.47
CCL28-204ENST00000514421 SYS1-DBNDD2H3BUS1 97 aa5.89□□□□□ -1.47
CCL28-204ENST00000514421 GAS8-AS1O95177 125 aa5.89□□□□□ -1.47
CCL28-204ENST00000514421 KRTDAPP60985 99 aa5.89□□□□□ -1.47
CCL28-204ENST00000514421 DAZ2Q13117 558 aaKnown RBP5.89□□□□□ -1.47
CCL28-204ENST00000514421 Q8N8P6 123 aa5.89□□□□□ -1.47
CCL28-204ENST00000514421 NDUFAF3Q9BU61 184 aa5.89□□□□□ -1.47
CCL28-204ENST00000514421 C20orf202A1L168 122 aa5.88□□□□□ -1.47
CCL28-204ENST00000514421 LINC00587B1AMM8 73 aa5.88□□□□□ -1.47
CCL28-204ENST00000514421 NCR2O95944 276 aa5.88□□□□□ -1.47
CCL28-204ENST00000514421 SSTP61278 116 aa5.88□□□□□ -1.47
CCL28-204ENST00000514421 PET117Q6UWS5 81 aa5.88□□□□□ -1.47
CCL28-204ENST00000514421 C11orf72Q8NBR9 251 aa5.88□□□□□ -1.47
CCL28-204ENST00000514421 RASL10AQ92737 203 aa5.88□□□□□ -1.47
CCL28-204ENST00000514421 MDFICQ9P1T7 246 aa5.88□□□□□ -1.47
CCL28-204ENST00000514421 APLNQ9ULZ1 77 aa5.88□□□□□ -1.47
CCL28-204ENST00000514421 TRBV6-5A0A0K0K1A5 114 aa5.87□□□□□ -1.47
CCL28-204ENST00000514421 HBDP02042 147 aa5.87□□□□□ -1.47
CCL28-204ENST00000514421 ATP5G1P05496 136 aa5.87□□□□□ -1.47
CCL28-204ENST00000514421 HTN3P15516 51 aa5.87□□□□□ -1.47
CCL28-204ENST00000514421 GATA1P15976 413 aaPredicted RBP5.87□□□□□ -1.47
CCL28-204ENST00000514421 DDTP30046 118 aa5.87□□□□□ -1.47
CCL28-204ENST00000514421 FCER1GP30273 86 aa5.87□□□□□ -1.47
CCL28-204ENST00000514421 LINC01545Q5VT33 79 aa5.87□□□□□ -1.47
CCL28-204ENST00000514421 LINC00173Q6ZV60 143 aa5.87□□□□□ -1.47
CCL28-204ENST00000514421 LINC00612Q8N6U2 182 aa5.87□□□□□ -1.47
CCL28-204ENST00000514421 SYT8Q8NBV8 401 aa5.87□□□□□ -1.47
CCL28-204ENST00000514421 SPXQ9BT56 116 aa5.87□□□□□ -1.47
CCL28-204ENST00000514421 MAP1LC3CQ9BXW4 147 aa5.87□□□□□ -1.47
CCL28-204ENST00000514421 VPS13DQ5THJ4 4388 aa5.86□□□□□ -1.47
CCL28-204ENST00000514421 LOC389332A0A1B0GUA5 103 aa5.86□□□□□ -1.47
CCL28-204ENST00000514421 GAGE12BA1L429 117 aa5.86□□□□□ -1.47
CCL28-204ENST00000514421 F5H768 121 aa5.86□□□□□ -1.47
CCL28-204ENST00000514421 GAGE7O76087 117 aa5.86□□□□□ -1.47
CCL28-204ENST00000514421 CRYGDP07320 174 aa5.86□□□□□ -1.47
CCL28-204ENST00000514421 GAGE12FP0CL80 117 aa5.86□□□□□ -1.47
CCL28-204ENST00000514421 GAGE12GP0CL81 117 aa5.86□□□□□ -1.47
CCL28-204ENST00000514421 GAGE12IP0CL82 117 aa5.86□□□□□ -1.47
CCL28-204ENST00000514421 SUMO2P61956 95 aaKnown RBP5.86□□□□□ -1.47
CCL28-204ENST00000514421 ZNF415Q09FC8 603 aa5.86□□□□□ -1.47
CCL28-204ENST00000514421 LGALS9BQ3B8N2 356 aa5.86□□□□□ -1.47
CCL28-204ENST00000514421 LGALS9CQ6DKI2 356 aa5.86□□□□□ -1.47
CCL28-204ENST00000514421 UFSP1Q6NVU6 142 aa5.86□□□□□ -1.47
CCL28-204ENST00000514421 Q6ZTI0 123 aa5.86□□□□□ -1.47
CCL28-204ENST00000514421 C14orf178Q8N769 122 aaPredicted RBP5.86□□□□□ -1.47
CCL28-204ENST00000514421 VAMP8Q9BV40 100 aa5.86□□□□□ -1.47
CCL28-204ENST00000514421 SMIM2Q9BVW6 85 aa5.86□□□□□ -1.47
CCL28-204ENST00000514421 TRGV2A0A075B6R0 118 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms