RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 G0S2P27469 103 aa10.81□□□□□ -0.68
VCAN-211ENST00000513984 CFAP126Q5VTH2 177 aa10.81□□□□□ -0.68
VCAN-211ENST00000513984 TMEM263Q8WUH6 116 aaKnown RBP10.81□□□□□ -0.68
VCAN-211ENST00000513984 LINC01549A6NIU2 74 aa10.81□□□□□ -0.68
VCAN-211ENST00000513984 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.81□□□□□ -0.68
VCAN-211ENST00000513984 RPL35AP18077 110 aaKnown RBP10.81□□□□□ -0.68
VCAN-211ENST00000513984 ZFP2Q6ZN57 461 aa10.81□□□□□ -0.68
VCAN-211ENST00000513984 Q6ZN92 141 aa10.81□□□□□ -0.68
VCAN-211ENST00000513984 SPATA3Q8NHX4 192 aa10.81□□□□□ -0.68
VCAN-211ENST00000513984 MRPL16Q9NX20 251 aaKnown RBP10.81□□□□□ -0.68
VCAN-211ENST00000513984 RS1O15537 224 aa10.8□□□□□ -0.68
VCAN-211ENST00000513984 RIPPLY3P57055 190 aa10.8□□□□□ -0.68
VCAN-211ENST00000513984 LBHQ53QV2 105 aaPredicted RBP10.8□□□□□ -0.68
VCAN-211ENST00000513984 CSNK1G2-AS1Q8NCQ2 148 aa10.8□□□□□ -0.68
VCAN-211ENST00000513984 SCGB3A1Q96QR1 104 aa10.8□□□□□ -0.68
VCAN-211ENST00000513984 EREGO14944 169 aa10.79□□□□□ -0.68
VCAN-211ENST00000513984 HNRNPA3P51991 378 aaKnown RBP10.79□□□□□ -0.68
VCAN-211ENST00000513984 SNHG12Q9BXW3 62 aa10.79□□□□□ -0.68
VCAN-211ENST00000513984 TEP1Q99973 2627 aaKnown RBP10.79□□□□□ -0.68
VCAN-211ENST00000513984 IGHV3-73A0A0B4J1V6 119 aa10.79□□□□□ -0.68
VCAN-211ENST00000513984 TRAV12-1A0A0B4J245 112 aa10.79□□□□□ -0.68
VCAN-211ENST00000513984 M0R143 59 aa10.79□□□□□ -0.68
VCAN-211ENST00000513984 ERASQ7Z444 233 aa10.79□□□□□ -0.68
VCAN-211ENST00000513984 CYSLTR1Q9Y271 337 aa10.79□□□□□ -0.68
VCAN-211ENST00000513984 NOTCH3Q9UM47 2321 aa10.78□□□□□ -0.68
VCAN-211ENST00000513984 TENM1Q9UKZ4 2725 aa10.78□□□□□ -0.68
VCAN-211ENST00000513984 A0A087WX48 190 aa10.78□□□□□ -0.68
VCAN-211ENST00000513984 RHOHQ15669 191 aa10.78□□□□□ -0.68
VCAN-211ENST00000513984 GTSCR1Q86UQ5 136 aa10.78□□□□□ -0.68
VCAN-211ENST00000513984 IGHV3-53P01767 116 aa10.77□□□□□ -0.68
VCAN-211ENST00000513984 ANKRD39Q53RE8 183 aa10.77□□□□□ -0.68
VCAN-211ENST00000513984 SLC25A34Q6PIV7 304 aa10.77□□□□□ -0.68
VCAN-211ENST00000513984 C16orf74Q96GX8 76 aa10.77□□□□□ -0.68
VCAN-211ENST00000513984 C2orf88Q9BSF0 95 aa10.77□□□□□ -0.68
VCAN-211ENST00000513984 TP53TG1Q9Y2A0 90 aa10.77□□□□□ -0.68
VCAN-211ENST00000513984 MRPS16Q9Y3D3 137 aaKnown RBP10.77□□□□□ -0.68
VCAN-211ENST00000513984 ATRQ13535 2644 aa10.77□□□□□ -0.69
VCAN-211ENST00000513984 I3L3M4 83 aa10.77□□□□□ -0.69
VCAN-211ENST00000513984 DPM2O94777 84 aa10.77□□□□□ -0.69
VCAN-211ENST00000513984 TSHBP01222 138 aa10.77□□□□□ -0.69
VCAN-211ENST00000513984 IGKCP01834 107 aa10.77□□□□□ -0.69
VCAN-211ENST00000513984 COX8AP10176 69 aa10.77□□□□□ -0.69
VCAN-211ENST00000513984 Q6ZSN1 163 aa10.77□□□□□ -0.69
VCAN-211ENST00000513984 NEXN-AS1Q8NBZ9 246 aa10.77□□□□□ -0.69
VCAN-211ENST00000513984 VWFP04275 2813 aa10.76□□□□□ -0.69
VCAN-211ENST00000513984 PLAC8L1A1L4L8 177 aa10.76□□□□□ -0.69
VCAN-211ENST00000513984 P0DMU3 169 aa10.76□□□□□ -0.69
VCAN-211ENST00000513984 FAM231AP0DMU4 169 aa10.76□□□□□ -0.69
VCAN-211ENST00000513984 FAM231CP0DMU5 169 aa10.76□□□□□ -0.69
VCAN-211ENST00000513984 DAZ2Q13117 558 aaKnown RBP10.76□□□□□ -0.69
VCAN-211ENST00000513984 STPG4Q8N801 248 aa10.76□□□□□ -0.69
VCAN-211ENST00000513984 MRPL35Q9NZE8 188 aaKnown RBP10.76□□□□□ -0.69
VCAN-211ENST00000513984 HHLA3Q9XRX5 114 aa10.76□□□□□ -0.69
VCAN-211ENST00000513984 TRGV1A0A0A0MS02 117 aa10.75□□□□□ -0.69
VCAN-211ENST00000513984 IGIPA6NJ69 53 aa10.75□□□□□ -0.69
VCAN-211ENST00000513984 BAALCQ8WXS3 180 aa10.75□□□□□ -0.69
VCAN-211ENST00000513984 RPL39P62891 51 aaKnown RBP10.74□□□□□ -0.69
VCAN-211ENST00000513984 TIMM17AQ99595 171 aa10.74□□□□□ -0.69
VCAN-211ENST00000513984 TP73-AS1Q9UF72 201 aa10.74□□□□□ -0.69
VCAN-211ENST00000513984 F8VRH5 84 aa10.74□□□□□ -0.69
VCAN-211ENST00000513984 PLNP26678 52 aa10.74□□□□□ -0.69
VCAN-211ENST00000513984 Q6ZTI0 123 aa10.74□□□□□ -0.69
VCAN-211ENST00000513984 WFDC9Q8NEX5 89 aa10.74□□□□□ -0.69
VCAN-211ENST00000513984 DEFB104AQ8WTQ1 72 aa10.74□□□□□ -0.69
VCAN-211ENST00000513984 TMEM141Q96I45 108 aa10.74□□□□□ -0.69
VCAN-211ENST00000513984 DNAJC30Q96LL9 226 aa10.74□□□□□ -0.69
VCAN-211ENST00000513984 TNFRSF18Q9Y5U5 241 aa10.74□□□□□ -0.69
VCAN-211ENST00000513984 TRAV4A0A0B4J268 109 aa10.73□□□□□ -0.69
VCAN-211ENST00000513984 RRN3P1Q2M238 152 aa10.73□□□□□ -0.69
VCAN-211ENST00000513984 OR4C5Q8NGB2 326 aa10.73□□□□□ -0.69
VCAN-211ENST00000513984 WIPF1O43516 503 aa10.72□□□□□ -0.69
VCAN-211ENST00000513984 FGF6P10767 208 aa10.72□□□□□ -0.69
VCAN-211ENST00000513984 C20orf203Q8NBC4 194 aa10.72□□□□□ -0.69
VCAN-211ENST00000513984 OVOL2Q9BRP0 275 aa10.72□□□□□ -0.69
VCAN-211ENST00000513984 NOP10Q9NPE3 64 aaKnown RBP10.72□□□□□ -0.69
VCAN-211ENST00000513984 CHTOPQ9Y3Y2 248 aaKnown RBP10.72□□□□□ -0.69
VCAN-211ENST00000513984 Q9UF83 564 aa10.72□□□□□ -0.69
VCAN-211ENST00000513984 PRSS29PA6NIE9 313 aa10.71□□□□□ -0.69
VCAN-211ENST00000513984 BOD1L2Q8IYS8 172 aa10.71□□□□□ -0.69
VCAN-211ENST00000513984 ZNF479Q96JC4 524 aa10.71□□□□□ -0.69
VCAN-211ENST00000513984 DLEU1O43261 78 aa10.7□□□□□ -0.7
VCAN-211ENST00000513984 ZC2HC1BQ5TFG8 222 aa10.7□□□□□ -0.7
VCAN-211ENST00000513984 KRTAP24-1Q3LI83 254 aa10.7□□□□□ -0.7
VCAN-211ENST00000513984 PMVKQ15126 192 aa10.69□□□□□ -0.7
VCAN-211ENST00000513984 C2orf91Q6ZV80 131 aa10.69□□□□□ -0.7
VCAN-211ENST00000513984 BAHCC1Q9P281 2608 aa10.69□□□□□ -0.7
VCAN-211ENST00000513984 IGKV2D-26A0A0A0MRZ7 120 aa10.68□□□□□ -0.7
VCAN-211ENST00000513984 TRBV10-1A0A0K0K1A3 114 aa10.68□□□□□ -0.7
VCAN-211ENST00000513984 CIDEAO60543 219 aa10.68□□□□□ -0.7
VCAN-211ENST00000513984 NMUP48645 174 aa10.68□□□□□ -0.7
VCAN-211ENST00000513984 TCTAP57738 103 aa10.68□□□□□ -0.7
VCAN-211ENST00000513984 K7EQD1 137 aa10.68□□□□□ -0.7
VCAN-211ENST00000513984 CST9LQ9H4G1 147 aa10.68□□□□□ -0.7
VCAN-211ENST00000513984 BATFQ16520 125 aa10.67□□□□□ -0.7
VCAN-211ENST00000513984 PCP2Q8IVA1 136 aa10.67□□□□□ -0.7
VCAN-211ENST00000513984 KIR2DL5BQ8NHK3 375 aa10.67□□□□□ -0.7
VCAN-211ENST00000513984 PYGO1Q9Y3Y4 419 aa10.67□□□□□ -0.7
VCAN-211ENST00000513984 IGLV4-69A0A075B6H9 119 aa10.66□□□□□ -0.7
VCAN-211ENST00000513984 GAGE12BA1L429 117 aa10.66□□□□□ -0.7
VCAN-211ENST00000513984 GAGE7O76087 117 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms