RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 MUC21A0A140T8X8 626 aa7.46□□□□□ -1.22
PDLIM5-217ENST00000512274 CRYGDP07320 174 aa7.46□□□□□ -1.22
PDLIM5-217ENST00000512274 FXYD7P58549 80 aa7.46□□□□□ -1.22
PDLIM5-217ENST00000512274 UFSP1Q6NVU6 142 aa7.46□□□□□ -1.22
PDLIM5-217ENST00000512274 ZFP2Q6ZN57 461 aa7.46□□□□□ -1.22
PDLIM5-217ENST00000512274 C18orf15Q96N68 181 aa7.46□□□□□ -1.22
PDLIM5-217ENST00000512274 AP5S1Q9NUS5 200 aa7.46□□□□□ -1.22
PDLIM5-217ENST00000512274 PKHD1P08F94 4074 aa7.46□□□□□ -1.22
PDLIM5-217ENST00000512274 IGLV2-18A0A075B6J9 118 aa7.45□□□□□ -1.22
PDLIM5-217ENST00000512274 NUPR1O60356 82 aa7.45□□□□□ -1.22
PDLIM5-217ENST00000512274 HSBP1O75506 76 aa7.45□□□□□ -1.22
PDLIM5-217ENST00000512274 TNFRSF6BO95407 300 aa7.45□□□□□ -1.22
PDLIM5-217ENST00000512274 NPYP01303 97 aa7.45□□□□□ -1.22
PDLIM5-217ENST00000512274 SMIM17P0DL12 118 aa7.45□□□□□ -1.22
PDLIM5-217ENST00000512274 APOC4P55056 127 aa7.45□□□□□ -1.22
PDLIM5-217ENST00000512274 ZNF876PQ49A33 203 aa7.45□□□□□ -1.22
PDLIM5-217ENST00000512274 NIT1Q86X76 327 aa7.45□□□□□ -1.22
PDLIM5-217ENST00000512274 C14orf178Q8N769 122 aaPredicted RBP7.45□□□□□ -1.22
PDLIM5-217ENST00000512274 TMEM208Q9BTX3 173 aa7.45□□□□□ -1.22
PDLIM5-217ENST00000512274 MAP1LC3AQ9H492 121 aa7.45□□□□□ -1.22
PDLIM5-217ENST00000512274 TP53TG1Q9Y2A0 90 aa7.45□□□□□ -1.22
PDLIM5-217ENST00000512274 VPS13DQ5THJ4 4388 aa7.45□□□□□ -1.22
PDLIM5-217ENST00000512274 PLAC8L1A1L4L8 177 aa7.44□□□□□ -1.22
PDLIM5-217ENST00000512274 LINC01549A6NIU2 74 aa7.44□□□□□ -1.22
PDLIM5-217ENST00000512274 FABP4P15090 132 aa7.44□□□□□ -1.22
PDLIM5-217ENST00000512274 IQCJQ1A5X6 159 aa7.44□□□□□ -1.22
PDLIM5-217ENST00000512274 Q6ZWC4 215 aa7.44□□□□□ -1.22
PDLIM5-217ENST00000512274 Q8N1X5 172 aa7.44□□□□□ -1.22
PDLIM5-217ENST00000512274 LINC00612Q8N6U2 182 aa7.44□□□□□ -1.22
PDLIM5-217ENST00000512274 Q8N8P6 123 aa7.44□□□□□ -1.22
PDLIM5-217ENST00000512274 H7C1H1 209 aa7.43□□□□□ -1.22
PDLIM5-217ENST00000512274 TCAPO15273 167 aa7.43□□□□□ -1.22
PDLIM5-217ENST00000512274 RS1O15537 224 aa7.43□□□□□ -1.22
PDLIM5-217ENST00000512274 CDK2AP2O75956 126 aa7.43□□□□□ -1.22
PDLIM5-217ENST00000512274 AMTP48728 403 aa7.43□□□□□ -1.22
PDLIM5-217ENST00000512274 JOSD1Q15040 202 aaPredicted RBP7.43□□□□□ -1.22
PDLIM5-217ENST00000512274 RRN3P1Q2M238 152 aa7.43□□□□□ -1.22
PDLIM5-217ENST00000512274 LINC00518Q8N0U6 118 aa7.43□□□□□ -1.22
PDLIM5-217ENST00000512274 C11orf45Q8TAV5 145 aa7.43□□□□□ -1.22
PDLIM5-217ENST00000512274 SAMD10Q9BYL1 202 aa7.43□□□□□ -1.22
PDLIM5-217ENST00000512274 C16orf90A8MZG2 172 aa7.42□□□□□ -1.22
PDLIM5-217ENST00000512274 M0QY20 66 aa7.42□□□□□ -1.22
PDLIM5-217ENST00000512274 AKR1D1P51857 326 aa7.42□□□□□ -1.22
PDLIM5-217ENST00000512274 TCTAP57738 103 aa7.42□□□□□ -1.22
PDLIM5-217ENST00000512274 SUMO2P61956 95 aaKnown RBP7.42□□□□□ -1.22
PDLIM5-217ENST00000512274 FA2HQ7L5A8 372 aa7.42□□□□□ -1.22
PDLIM5-217ENST00000512274 OR10D4PQ8NGN7 298 aa7.42□□□□□ -1.22
PDLIM5-217ENST00000512274 PRSS3P2Q8NHM4 247 aa7.42□□□□□ -1.22
PDLIM5-217ENST00000512274 SMIM2Q9BVW6 85 aa7.42□□□□□ -1.22
PDLIM5-217ENST00000512274 TIMM8BQ9Y5J9 83 aaPredicted RBP7.42□□□□□ -1.22
PDLIM5-217ENST00000512274 IGHV1-24A0A0C4DH33 117 aa7.41□□□□□ -1.22
PDLIM5-217ENST00000512274 TRBV27A0A0K0K1C4 114 aa7.41□□□□□ -1.22
PDLIM5-217ENST00000512274 DEFB4AO15263 64 aa7.41□□□□□ -1.22
PDLIM5-217ENST00000512274 NCR2O95944 276 aa7.41□□□□□ -1.22
PDLIM5-217ENST00000512274 IGHV3-53P01767 116 aa7.41□□□□□ -1.22
PDLIM5-217ENST00000512274 AZU1P20160 251 aa7.41□□□□□ -1.22
PDLIM5-217ENST00000512274 IFI27P40305 119 aaPredicted RBP7.41□□□□□ -1.22
PDLIM5-217ENST00000512274 POLR2KP53803 58 aaKnown RBP7.41□□□□□ -1.22
PDLIM5-217ENST00000512274 PDZD11Q5EBL8 140 aa7.41□□□□□ -1.22
PDLIM5-217ENST00000512274 CFAP126Q5VTH2 177 aa7.41□□□□□ -1.22
PDLIM5-217ENST00000512274 SUMO4Q6EEV6 95 aa7.41□□□□□ -1.22
PDLIM5-217ENST00000512274 RNASEKQ6P5S7 137 aaKnown RBP7.41□□□□□ -1.22
PDLIM5-217ENST00000512274 DYNC1H1Q14204 4646 aaKnown RBP7.41□□□□□ -1.22
PDLIM5-217ENST00000512274 A0A096LNJ9 63 aa7.4□□□□□ -1.22
PDLIM5-217ENST00000512274 TRAV4A0A0B4J268 109 aa7.4□□□□□ -1.22
PDLIM5-217ENST00000512274 SMKR1H3BMG3 65 aa7.4□□□□□ -1.22
PDLIM5-217ENST00000512274 G0S2P27469 103 aa7.4□□□□□ -1.22
PDLIM5-217ENST00000512274 PYY3Q5JQD4 70 aa7.4□□□□□ -1.22
PDLIM5-217ENST00000512274 SPATA12Q7Z6I5 190 aa7.4□□□□□ -1.22
PDLIM5-217ENST00000512274 DNAJC30Q96LL9 226 aa7.4□□□□□ -1.22
PDLIM5-217ENST00000512274 NIT2Q9NQR4 276 aa7.4□□□□□ -1.22
PDLIM5-217ENST00000512274 X6R8D5 127 aa7.4□□□□□ -1.22
PDLIM5-217ENST00000512274 HERC1Q15751 4861 aa7.39□□□□□ -1.23
PDLIM5-217ENST00000512274 TRBV10-1A0A0K0K1A3 114 aa7.39□□□□□ -1.23
PDLIM5-217ENST00000512274 LYRM9A8MSI8 78 aa7.39□□□□□ -1.23
PDLIM5-217ENST00000512274 GAS8-AS1O95177 125 aa7.39□□□□□ -1.23
PDLIM5-217ENST00000512274 HBDP02042 147 aa7.39□□□□□ -1.23
PDLIM5-217ENST00000512274 FCER1GP30273 86 aa7.39□□□□□ -1.23
PDLIM5-217ENST00000512274 SSTP61278 116 aa7.39□□□□□ -1.23
PDLIM5-217ENST00000512274 ORMDL2Q53FV1 153 aa7.39□□□□□ -1.23
PDLIM5-217ENST00000512274 TMEM70Q9BUB7 260 aa7.39□□□□□ -1.23
PDLIM5-217ENST00000512274 JPT2Q9H910 190 aa7.39□□□□□ -1.23
PDLIM5-217ENST00000512274 HSPB8Q9UJY1 196 aa7.39□□□□□ -1.23
PDLIM5-217ENST00000512274 HSPG2P98160 4391 aa7.39□□□□□ -1.23
PDLIM5-217ENST00000512274 A0A087WWL8 130 aa7.38□□□□□ -1.23
PDLIM5-217ENST00000512274 TRAV26-2A0A0B4J265 109 aa7.38□□□□□ -1.23
PDLIM5-217ENST00000512274 VCYO14598 125 aa7.38□□□□□ -1.23
PDLIM5-217ENST00000512274 LEPROTL1O95214 131 aa7.38□□□□□ -1.23
PDLIM5-217ENST00000512274 MGPP08493 103 aa7.38□□□□□ -1.23
PDLIM5-217ENST00000512274 MIFP14174 115 aa7.38□□□□□ -1.23
PDLIM5-217ENST00000512274 HTN1P15515 57 aa7.38□□□□□ -1.23
PDLIM5-217ENST00000512274 GATA1P15976 413 aaPredicted RBP7.38□□□□□ -1.23
PDLIM5-217ENST00000512274 LAGE3Q14657 143 aa7.38□□□□□ -1.23
PDLIM5-217ENST00000512274 ST20Q9HBF5 79 aa7.38□□□□□ -1.23
PDLIM5-217ENST00000512274 FAT2Q9NYQ8 4349 aa7.38□□□□□ -1.23
PDLIM5-217ENST00000512274 TEX48A0A1B0GUV7 120 aa7.37□□□□□ -1.23
PDLIM5-217ENST00000512274 LCE2BO14633 110 aa7.37□□□□□ -1.23
PDLIM5-217ENST00000512274 ZNF56Q15929 161 aa7.37□□□□□ -1.23
PDLIM5-217ENST00000512274 FAM19A2Q8N3H0 131 aa7.37□□□□□ -1.23
PDLIM5-217ENST00000512274 DNAH6Q9C0G6 4158 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms