RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 IGHV3-33P01772 117 aa6.79□□□□□ -1.32
PDGFRA-208ENST00000509490 GTSF1LQ9H1H1 148 aa6.79□□□□□ -1.32
PDGFRA-208ENST00000509490 EDN2P20800 178 aa6.79□□□□□ -1.32
PDGFRA-208ENST00000509490 CARD19Q96LW7 228 aa6.79□□□□□ -1.32
PDGFRA-208ENST00000509490 SPANXDQ9BXN6 97 aa6.79□□□□□ -1.32
PDGFRA-208ENST00000509490 SPANXCQ9NY87 97 aa6.79□□□□□ -1.32
PDGFRA-208ENST00000509490 EIF4EBP3O60516 100 aaPredicted RBP6.78□□□□□ -1.32
PDGFRA-208ENST00000509490 GNLYP22749 145 aa6.78□□□□□ -1.32
PDGFRA-208ENST00000509490 INSL3P51460 131 aa6.78□□□□□ -1.32
PDGFRA-208ENST00000509490 TMEM170BQ5T4T1 132 aa6.78□□□□□ -1.32
PDGFRA-208ENST00000509490 UBE2E2Q96LR5 201 aa6.78□□□□□ -1.32
PDGFRA-208ENST00000509490 LITAFQ99732 161 aa6.78□□□□□ -1.32
PDGFRA-208ENST00000509490 F5H697 171 aa6.78□□□□□ -1.32
PDGFRA-208ENST00000509490 TIMM17BO60830 172 aa6.78□□□□□ -1.32
PDGFRA-208ENST00000509490 MTURNQ8N3F0 131 aa6.78□□□□□ -1.32
PDGFRA-208ENST00000509490 A0A1B0GV72 72 aa6.78□□□□□ -1.32
PDGFRA-208ENST00000509490 AVPP01185 164 aa6.78□□□□□ -1.32
PDGFRA-208ENST00000509490 PSMB2P49721 201 aa6.78□□□□□ -1.32
PDGFRA-208ENST00000509490 DNAJC30Q96LL9 226 aa6.78□□□□□ -1.32
PDGFRA-208ENST00000509490 PPDPFQ9H3Y8 114 aa6.78□□□□□ -1.32
PDGFRA-208ENST00000509490 TRBV30A0A0K0K1B3 111 aa6.77□□□□□ -1.33
PDGFRA-208ENST00000509490 A8MWV9 139 aa6.77□□□□□ -1.33
PDGFRA-208ENST00000509490 ZNF56Q15929 161 aa6.77□□□□□ -1.33
PDGFRA-208ENST00000509490 SPANXA1Q9NS26 97 aa6.77□□□□□ -1.33
PDGFRA-208ENST00000509490 ZNF688P0C7X2 276 aa6.77□□□□□ -1.33
PDGFRA-208ENST00000509490 FAM19A3Q7Z5A8 133 aa6.77□□□□□ -1.33
PDGFRA-208ENST00000509490 Q8N2B8 174 aa6.77□□□□□ -1.33
PDGFRA-208ENST00000509490 A0A0J9YXY3 114 aa6.76□□□□□ -1.33
PDGFRA-208ENST00000509490 TINCRA0A1B0GVN0 87 aa6.76□□□□□ -1.33
PDGFRA-208ENST00000509490 TMEM262E9PQX1 116 aa6.76□□□□□ -1.33
PDGFRA-208ENST00000509490 ATP5J2P56134 94 aa6.76□□□□□ -1.33
PDGFRA-208ENST00000509490 SMAGPQ0VAQ4 97 aa6.76□□□□□ -1.33
PDGFRA-208ENST00000509490 LY6DQ14210 128 aa6.76□□□□□ -1.33
PDGFRA-208ENST00000509490 LINC01356Q8N9X3 169 aa6.76□□□□□ -1.33
PDGFRA-208ENST00000509490 ZNF418Q8TF45 676 aaPredicted RBP6.76□□□□□ -1.33
PDGFRA-208ENST00000509490 HIVEP3Q5T1R4 2406 aa6.76□□□□□ -1.33
PDGFRA-208ENST00000509490 CEP295Q9C0D2 2601 aa6.76□□□□□ -1.33
PDGFRA-208ENST00000509490 IGLV5-45A0A087WSX0 123 aa6.76□□□□□ -1.33
PDGFRA-208ENST00000509490 RPL13AP40429 203 aaKnown RBP6.76□□□□□ -1.33
PDGFRA-208ENST00000509490 BEAN1Q3B7T3 259 aa6.76□□□□□ -1.33
PDGFRA-208ENST00000509490 TIMM21Q9BVV7 248 aa6.76□□□□□ -1.33
PDGFRA-208ENST00000509490 SPTBN2O15020 2390 aa6.76□□□□□ -1.33
PDGFRA-208ENST00000509490 IGHV1-58A0A0C4DH39 117 aa6.75□□□□□ -1.33
PDGFRA-208ENST00000509490 LOC107984156A0A0G2JMH3 177 aa6.75□□□□□ -1.33
PDGFRA-208ENST00000509490 SRD5A1P18405 259 aa6.75□□□□□ -1.33
PDGFRA-208ENST00000509490 ARL17AQ8IVW1 177 aa6.75□□□□□ -1.33
PDGFRA-208ENST00000509490 FHL3Q13643 280 aa6.75□□□□□ -1.33
PDGFRA-208ENST00000509490 DEFB112Q30KQ8 113 aa6.75□□□□□ -1.33
PDGFRA-208ENST00000509490 IGKV3-7A0A075B6H7 116 aa6.75□□□□□ -1.33
PDGFRA-208ENST00000509490 IGHV4-59P01825 116 aa6.75□□□□□ -1.33
PDGFRA-208ENST00000509490 RBMY1A1P0DJD3 496 aaKnown RBP6.75□□□□□ -1.33
PDGFRA-208ENST00000509490 RBMY1CP0DJD4 496 aa6.75□□□□□ -1.33
PDGFRA-208ENST00000509490 EMP1P54849 157 aa6.75□□□□□ -1.33
PDGFRA-208ENST00000509490 RBMY1FQ15415 496 aaKnown RBP6.75□□□□□ -1.33
PDGFRA-208ENST00000509490 Q6ZUT4 128 aa6.75□□□□□ -1.33
PDGFRA-208ENST00000509490 ZNF702PQ9H963 129 aa6.75□□□□□ -1.33
PDGFRA-208ENST00000509490 VPREB3Q9UKI3 123 aa6.75□□□□□ -1.33
PDGFRA-208ENST00000509490 ERG28Q9UKR5 140 aa6.75□□□□□ -1.33
PDGFRA-208ENST00000509490 DCHS1Q96JQ0 3298 aa6.74□□□□□ -1.33
PDGFRA-208ENST00000509490 IGHV3-30-3P0DP02 117 aa6.74□□□□□ -1.33
PDGFRA-208ENST00000509490 SPINK13Q1W4C9 94 aa6.74□□□□□ -1.33
PDGFRA-208ENST00000509490 MUSTN1Q8IVN3 82 aa6.74□□□□□ -1.33
PDGFRA-208ENST00000509490 CHCHD7Q9BUK0 85 aa6.74□□□□□ -1.33
PDGFRA-208ENST00000509490 A0A0J9YXV3 536 aa6.74□□□□□ -1.33
PDGFRA-208ENST00000509490 TIRAPP58753 221 aa6.74□□□□□ -1.33
PDGFRA-208ENST00000509490 FAM74A4Q5TZK3 123 aa6.74□□□□□ -1.33
PDGFRA-208ENST00000509490 Q6YL49 198 aa6.74□□□□□ -1.33
PDGFRA-208ENST00000509490 TRAV12-2A0A075B6T6 113 aa6.73□□□□□ -1.33
PDGFRA-208ENST00000509490 H3BMM0 161 aa6.73□□□□□ -1.33
PDGFRA-208ENST00000509490 IFITM1P13164 125 aa6.73□□□□□ -1.33
PDGFRA-208ENST00000509490 UBE2D4Q9Y2X8 147 aa6.73□□□□□ -1.33
PDGFRA-208ENST00000509490 SLC25A20O43772 301 aa6.73□□□□□ -1.33
PDGFRA-208ENST00000509490 HOXD3P31249 432 aaPredicted RBP6.73□□□□□ -1.33
PDGFRA-208ENST00000509490 ATXN8Q156A1 80 aa6.73□□□□□ -1.33
PDGFRA-208ENST00000509490 ANKRD29Q8N6D5 301 aa6.73□□□□□ -1.33
PDGFRA-208ENST00000509490 VSIG2Q96IQ7 327 aa6.73□□□□□ -1.33
PDGFRA-208ENST00000509490 OPRPNQ99935 248 aaPredicted RBP6.73□□□□□ -1.33
PDGFRA-208ENST00000509490 IGHV3-53P01767 116 aa6.72□□□□□ -1.33
PDGFRA-208ENST00000509490 ZNF415Q09FC8 603 aa6.72□□□□□ -1.33
PDGFRA-208ENST00000509490 MIAQ16674 131 aa6.72□□□□□ -1.33
PDGFRA-208ENST00000509490 ZFAND6Q6FIF0 208 aa6.72□□□□□ -1.33
PDGFRA-208ENST00000509490 RS1O15537 224 aa6.72□□□□□ -1.33
PDGFRA-208ENST00000509490 SYNJ2BPP57105 145 aa6.72□□□□□ -1.33
PDGFRA-208ENST00000509490 DEFB121Q5J5C9 76 aa6.72□□□□□ -1.33
PDGFRA-208ENST00000509490 C11orf72Q8NBR9 251 aa6.72□□□□□ -1.33
PDGFRA-208ENST00000509490 IL17DQ8TAD2 202 aa6.72□□□□□ -1.33
PDGFRA-208ENST00000509490 TRBV10-2A0A0K0K1G8 114 aa6.72□□□□□ -1.33
PDGFRA-208ENST00000509490 YAE1D1Q9NRH1 226 aa6.72□□□□□ -1.33
PDGFRA-208ENST00000509490 RBMY1BA6NDE4 496 aaKnown RBP6.71□□□□□ -1.34
PDGFRA-208ENST00000509490 RBMY1EA6NEQ0 496 aaKnown RBP6.71□□□□□ -1.34
PDGFRA-208ENST00000509490 RBMY1DP0C7P1 496 aaKnown RBP6.71□□□□□ -1.34
PDGFRA-208ENST00000509490 CD28P10747 220 aa6.71□□□□□ -1.34
PDGFRA-208ENST00000509490 XGP55808 180 aa6.71□□□□□ -1.34
PDGFRA-208ENST00000509490 LINC01620Q4KN68 170 aa6.71□□□□□ -1.34
PDGFRA-208ENST00000509490 Q6Q795 121 aa6.71□□□□□ -1.34
PDGFRA-208ENST00000509490 SPTA1P02549 2419 aa6.71□□□□□ -1.34
PDGFRA-208ENST00000509490 H3BT86 120 aa6.71□□□□□ -1.34
PDGFRA-208ENST00000509490 SCGB1C2P0DMR2 95 aa6.71□□□□□ -1.34
PDGFRA-208ENST00000509490 MRPL23Q16540 153 aaKnown RBP6.71□□□□□ -1.34
PDGFRA-208ENST00000509490 C10orf99Q6UWK7 81 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms