RNA–Protein interactions for RNA: ENST00000509431.1

HMGCR-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 421 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-208ENST00000509431 ZFP82Q8N141 532 aa8.04□□□□□ -1.12
HMGCR-208ENST00000509431 EIF3GO75821 320 aaKnown RBP eCLIP8.03□□□□□ -1.12
HMGCR-208ENST00000509431 FLI1Q01543 452 aaPredicted RBP8.03□□□□□ -1.12
HMGCR-208ENST00000509431 THAP6Q8TBB0 222 aa8.03□□□□□ -1.12
HMGCR-208ENST00000509431 LOC107984640A0A0U1RRK4 108 aa8.02□□□□□ -1.13
HMGCR-208ENST00000509431 C17orf112F2Z3M2 114 aa8.02□□□□□ -1.13
HMGCR-208ENST00000509431 TCRAP04437 139 aa8.02□□□□□ -1.13
HMGCR-208ENST00000509431 GAGE2BQ13066 116 aa8.02□□□□□ -1.13
HMGCR-208ENST00000509431 FAM162BQ5T6X4 162 aa8.02□□□□□ -1.13
HMGCR-208ENST00000509431 PQLC2Q6ZP29 291 aa8.02□□□□□ -1.13
HMGCR-208ENST00000509431 PRNTQ86SH4 94 aa8.02□□□□□ -1.13
HMGCR-208ENST00000509431 TSKUQ8WUA8 353 aa8.02□□□□□ -1.13
HMGCR-208ENST00000509431 CFC1BP0CG36 223 aa8.01□□□□□ -1.13
HMGCR-208ENST00000509431 C9orf116Q5BN46 136 aaPredicted RBP8.01□□□□□ -1.13
HMGCR-208ENST00000509431 C5orf17Q8NAS9 161 aa8.01□□□□□ -1.13
HMGCR-208ENST00000509431 TMEM243Q9BU79 118 aa8.01□□□□□ -1.13
HMGCR-208ENST00000509431 FGF6P10767 208 aa8□□□□□ -1.13
HMGCR-208ENST00000509431 PHF5AQ7RTV0 110 aaKnown RBP8□□□□□ -1.13
HMGCR-208ENST00000509431 A0A087WZ39 114 aa7.99□□□□□ -1.13
HMGCR-208ENST00000509431 KRBOX1C9JBD0 128 aa7.99□□□□□ -1.13
HMGCR-208ENST00000509431 SYCNQ0VAF6 134 aa7.99□□□□□ -1.13
HMGCR-208ENST00000509431 CHCHD10Q8WYQ3 142 aaPredicted RBP7.99□□□□□ -1.13
HMGCR-208ENST00000509431 WDR61Q9GZS3 305 aaKnown RBP7.99□□□□□ -1.13
HMGCR-208ENST00000509431 IGLV7-46A0A075B6I9 117 aa7.98□□□□□ -1.13
HMGCR-208ENST00000509431 NAA50Q9GZZ1 169 aaKnown RBP7.98□□□□□ -1.13
HMGCR-208ENST00000509431 MED28Q9H204 178 aa7.98□□□□□ -1.13
HMGCR-208ENST00000509431 RPP21Q9H633 154 aaKnown RBP7.98□□□□□ -1.13
HMGCR-208ENST00000509431 IGHV1-58A0A0C4DH39 117 aa7.97□□□□□ -1.13
HMGCR-208ENST00000509431 NDUFB6O95139 128 aa7.97□□□□□ -1.13
HMGCR-208ENST00000509431 TMBIM6P55061 237 aa7.97□□□□□ -1.13
HMGCR-208ENST00000509431 GRIFINA4D1Z8 144 aa7.96□□□□□ -1.14
HMGCR-208ENST00000509431 F5H697 171 aa7.96□□□□□ -1.14
HMGCR-208ENST00000509431 H3BMQ9 156 aa7.96□□□□□ -1.14
HMGCR-208ENST00000509431 UBE2L6O14933 153 aa7.96□□□□□ -1.14
HMGCR-208ENST00000509431 ISOC2Q96AB3 205 aa7.96□□□□□ -1.14
HMGCR-208ENST00000509431 IGKV3OR2-268A0A0C4DH90 116 aa7.95□□□□□ -1.14
HMGCR-208ENST00000509431 FAM25EA8MYX2 175 aa7.95□□□□□ -1.14
HMGCR-208ENST00000509431 ZNF561-AS1K7EIQ3 104 aa7.95□□□□□ -1.14
HMGCR-208ENST00000509431 M0R036 132 aa7.95□□□□□ -1.14
HMGCR-208ENST00000509431 FOXI1Q12951 378 aa7.95□□□□□ -1.14
HMGCR-208ENST00000509431 ASB16-AS1Q495Z4 193 aa7.95□□□□□ -1.14
HMGCR-208ENST00000509431 LINC00526Q96FQ7 95 aa7.95□□□□□ -1.14
HMGCR-208ENST00000509431 RETNLBQ9BQ08 111 aa7.95□□□□□ -1.14
HMGCR-208ENST00000509431 SSBP4Q9BWG4 385 aaPredicted RBP7.95□□□□□ -1.14
HMGCR-208ENST00000509431 FLVCR2Q9UPI3 526 aa7.95□□□□□ -1.14
HMGCR-208ENST00000509431 NHLH2Q02577 135 aa7.94□□□□□ -1.14
HMGCR-208ENST00000509431 PYDC2Q56P42 97 aa7.94□□□□□ -1.14
HMGCR-208ENST00000509431 EPDR1Q9UM22 224 aa7.94□□□□□ -1.14
HMGCR-208ENST00000509431 A0A1W2PPV4 95 aa7.93□□□□□ -1.14
HMGCR-208ENST00000509431 EIF5AL1Q6IS14 154 aaKnown RBP7.93□□□□□ -1.14
HMGCR-208ENST00000509431 SDHCQ99643 169 aaPredicted RBP7.93□□□□□ -1.14
HMGCR-208ENST00000509431 RBM38Q9H0Z9 239 aaKnown RBP7.93□□□□□ -1.14
HMGCR-208ENST00000509431 ARL2-SNX15V9GYD0 113 aa7.93□□□□□ -1.14
HMGCR-208ENST00000509431 TRAV34A0A0B4J273 112 aa7.92□□□□□ -1.14
HMGCR-208ENST00000509431 NAP1L6A6NFF2 107 aa7.92□□□□□ -1.14
HMGCR-208ENST00000509431 APOMO95445 188 aa7.92□□□□□ -1.14
HMGCR-208ENST00000509431 CAMPP49913 170 aa7.92□□□□□ -1.14
HMGCR-208ENST00000509431 RAB32Q13637 225 aa7.92□□□□□ -1.14
HMGCR-208ENST00000509431 LINC01559Q495D7 138 aa7.92□□□□□ -1.14
HMGCR-208ENST00000509431 TYMSOSQ8TAI1 123 aa7.92□□□□□ -1.14
HMGCR-208ENST00000509431 PGLYRP4Q96LB8 373 aa7.92□□□□□ -1.14
HMGCR-208ENST00000509431 BCL2P10415 239 aa7.91□□□□□ -1.14
HMGCR-208ENST00000509431 ZNF471Q9BX82 626 aaPredicted RBP7.91□□□□□ -1.14
HMGCR-208ENST00000509431 IGLV4-69A0A075B6H9 119 aa7.9□□□□□ -1.14
HMGCR-208ENST00000509431 A6NHS1 94 aa7.9□□□□□ -1.14
HMGCR-208ENST00000509431 SH2D1AO60880 128 aa7.9□□□□□ -1.14
HMGCR-208ENST00000509431 CRIP1P50238 77 aa7.9□□□□□ -1.14
HMGCR-208ENST00000509431 SUMO1P63165 101 aaKnown RBP7.9□□□□□ -1.14
HMGCR-208ENST00000509431 LINC00173Q6ZV60 143 aa7.9□□□□□ -1.14
HMGCR-208ENST00000509431 KRTAP4-1Q9BYQ7 146 aa7.9□□□□□ -1.14
HMGCR-208ENST00000509431 SMIM17P0DL12 118 aa7.89□□□□□ -1.15
HMGCR-208ENST00000509431 RPL12P30050 165 aaKnown RBP7.89□□□□□ -1.15
HMGCR-208ENST00000509431 RPL18AQ02543 176 aaKnown RBP7.89□□□□□ -1.15
HMGCR-208ENST00000509431 IL15RAQ13261 267 aa7.89□□□□□ -1.15
HMGCR-208ENST00000509431 COX8CQ7Z4L0 72 aa7.89□□□□□ -1.15
HMGCR-208ENST00000509431 KRTAP11-1Q8IUC1 163 aa7.89□□□□□ -1.15
HMGCR-208ENST00000509431 NUP35Q8NFH5 326 aa7.89□□□□□ -1.15
HMGCR-208ENST00000509431 PPDPFQ9H3Y8 114 aa7.89□□□□□ -1.15
HMGCR-208ENST00000509431 TMSB15BA0A087X1C1 80 aa7.88□□□□□ -1.15
HMGCR-208ENST00000509431 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.88□□□□□ -1.15
HMGCR-208ENST00000509431 ARL14EPLP0DKL9 152 aa7.88□□□□□ -1.15
HMGCR-208ENST00000509431 LORP23490 312 aaPredicted RBP7.88□□□□□ -1.15
HMGCR-208ENST00000509431 CTAG1AP78358 180 aa7.88□□□□□ -1.15
HMGCR-208ENST00000509431 MEF2BQ02080 365 aaPredicted RBP7.88□□□□□ -1.15
HMGCR-208ENST00000509431 LCE2CQ5TA81 110 aa7.88□□□□□ -1.15
HMGCR-208ENST00000509431 A0A087X002 238 aa7.87□□□□□ -1.15
HMGCR-208ENST00000509431 XCL1P47992 114 aa7.87□□□□□ -1.15
HMGCR-208ENST00000509431 SEC61BP60468 96 aaKnown RBP7.87□□□□□ -1.15
HMGCR-208ENST00000509431 CNPY1Q3B7I2 92 aa7.87□□□□□ -1.15
HMGCR-208ENST00000509431 Q86TA4 180 aa7.87□□□□□ -1.15
HMGCR-208ENST00000509431 OR10AG1Q8NH19 301 aa7.87□□□□□ -1.15
HMGCR-208ENST00000509431 M0QY20 66 aa7.86□□□□□ -1.15
HMGCR-208ENST00000509431 ZNF861PO60384 105 aa7.86□□□□□ -1.15
HMGCR-208ENST00000509431 MT1HP80294 61 aa7.86□□□□□ -1.15
HMGCR-208ENST00000509431 COTL1Q14019 142 aa7.86□□□□□ -1.15
HMGCR-208ENST00000509431 AMMECR1LQ6DCA0 310 aa7.86□□□□□ -1.15
HMGCR-208ENST00000509431 SCGB1C1Q8TD33 95 aa7.86□□□□□ -1.15
HMGCR-208ENST00000509431 HMGB3O15347 200 aaKnown RBP7.85□□□□□ -1.15
HMGCR-208ENST00000509431 CXCL1P09341 107 aa7.85□□□□□ -1.15
HMGCR-208ENST00000509431 SPANXN1Q5VSR9 72 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms