RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 C2orf83Q53S99 150 aa3.13□□□□□ -1.91
NIPBL-206ENST00000509429 Q6JHZ5 121 aa3.13□□□□□ -1.91
NIPBL-206ENST00000509429 ARL17AQ8IVW1 177 aa3.13□□□□□ -1.91
NIPBL-206ENST00000509429 Q8N7P7 452 aa3.13□□□□□ -1.91
NIPBL-206ENST00000509429 SCGB3A1Q96QR1 104 aa3.13□□□□□ -1.91
NIPBL-206ENST00000509429 PHLDA3Q9Y5J5 127 aa3.13□□□□□ -1.91
NIPBL-206ENST00000509429 TET1Q8NFU7 2136 aa3.13□□□□□ -1.91
NIPBL-206ENST00000509429 TRBV25-1A0A075B6N4 114 aa3.12□□□□□ -1.91
NIPBL-206ENST00000509429 IGHV3OR16-10A0A075B7F0 116 aa3.12□□□□□ -1.91
NIPBL-206ENST00000509429 IGLV3-32A0A0A0MS00 114 aa3.12□□□□□ -1.91
NIPBL-206ENST00000509429 TEX49A0A1B0GTD5 131 aa3.12□□□□□ -1.91
NIPBL-206ENST00000509429 A0A1B0GVT2 93 aa3.12□□□□□ -1.91
NIPBL-206ENST00000509429 C11orf94C9JXX5 98 aa3.12□□□□□ -1.91
NIPBL-206ENST00000509429 ZNF22P17026 224 aaPredicted RBP3.12□□□□□ -1.91
NIPBL-206ENST00000509429 NPPCP23582 126 aa3.12□□□□□ -1.91
NIPBL-206ENST00000509429 ATXN8Q156A1 80 aa3.12□□□□□ -1.91
NIPBL-206ENST00000509429 DEFB134Q4QY38 66 aa3.12□□□□□ -1.91
NIPBL-206ENST00000509429 LINC01590Q5TEZ4 76 aa3.12□□□□□ -1.91
NIPBL-206ENST00000509429 FAM53AQ6NSI3 398 aaPredicted RBP3.12□□□□□ -1.91
NIPBL-206ENST00000509429 ORMDL3Q8N138 153 aa3.12□□□□□ -1.91
NIPBL-206ENST00000509429 C20orf197Q8N268 126 aa3.12□□□□□ -1.91
NIPBL-206ENST00000509429 RPRMLQ8N4K4 120 aa3.12□□□□□ -1.91
NIPBL-206ENST00000509429 ZFAND2AQ8N6M9 145 aa3.12□□□□□ -1.91
NIPBL-206ENST00000509429 TXNDC17Q9BRA2 123 aa3.12□□□□□ -1.91
NIPBL-206ENST00000509429 TTTY13Q9BZ97 58 aa3.12□□□□□ -1.91
NIPBL-206ENST00000509429 TTTY10Q9BZA0 68 aa3.12□□□□□ -1.91
NIPBL-206ENST00000509429 PROK2Q9HC23 129 aa3.12□□□□□ -1.91
NIPBL-206ENST00000509429 LRP4O75096 1905 aa3.12□□□□□ -1.91
NIPBL-206ENST00000509429 SCN3AQ9NY46 2000 aa3.12□□□□□ -1.91
NIPBL-206ENST00000509429 IGHV3-43A0A0B4J1X8 118 aa3.11□□□□□ -1.91
NIPBL-206ENST00000509429 IGHV5-51A0A0C4DH38 117 aa3.11□□□□□ -1.91
NIPBL-206ENST00000509429 TMEM30CPA0ZSE6 113 aa3.11□□□□□ -1.91
NIPBL-206ENST00000509429 LINC01549A6NIU2 74 aa3.11□□□□□ -1.91
NIPBL-206ENST00000509429 INAFM1C9JVW0 142 aa3.11□□□□□ -1.91
NIPBL-206ENST00000509429 HCG22E2RYF7 251 aa3.11□□□□□ -1.91
NIPBL-206ENST00000509429 KRTAP4-16G5E9R7 235 aaPredicted RBP3.11□□□□□ -1.91
NIPBL-206ENST00000509429 IGHV3-11P01762 117 aa3.11□□□□□ -1.91
NIPBL-206ENST00000509429 STATHP02808 62 aa3.11□□□□□ -1.91
NIPBL-206ENST00000509429 IGHV3-30-3P0DP02 117 aa3.11□□□□□ -1.91
NIPBL-206ENST00000509429 CCL3P10147 92 aa3.11□□□□□ -1.91
NIPBL-206ENST00000509429 COX7A1P24310 79 aa3.11□□□□□ -1.91
NIPBL-206ENST00000509429 IGLV3-21P80748 117 aaPredicted RBP3.11□□□□□ -1.91
NIPBL-206ENST00000509429 DEFB103AP81534 67 aa3.11□□□□□ -1.91
NIPBL-206ENST00000509429 ZNF117Q03924 483 aa3.11□□□□□ -1.91
NIPBL-206ENST00000509429 FAM229BQ4G0N7 80 aa3.11□□□□□ -1.91
NIPBL-206ENST00000509429 GDF5OSQ5U4N7 250 aa3.11□□□□□ -1.91
NIPBL-206ENST00000509429 OCR1Q9BZK8 76 aa3.11□□□□□ -1.91
NIPBL-206ENST00000509429 C11orf1Q9H5F2 150 aa3.11□□□□□ -1.91
NIPBL-206ENST00000509429 DPM3Q9P2X0 92 aa3.11□□□□□ -1.91
NIPBL-206ENST00000509429 R4GMQ9 66 aa3.11□□□□□ -1.91
NIPBL-206ENST00000509429 MYOFQ9NZM1 2061 aa3.11□□□□□ -1.91
NIPBL-206ENST00000509429 CPAMD8Q8IZJ3 1885 aa3.11□□□□□ -1.91
NIPBL-206ENST00000509429 SRCAPQ6ZRS2 3230 aa3.11□□□□□ -1.91
NIPBL-206ENST00000509429 THADAQ6YHU6 1953 aa3.11□□□□□ -1.91
NIPBL-206ENST00000509429 PCNTO95613 3336 aa3.1□□□□□ -1.91
NIPBL-206ENST00000509429 IGKV1D-42A0A075B6H8 117 aa3.1□□□□□ -1.91
NIPBL-206ENST00000509429 IGLV5-37A0A075B6J1 123 aa3.1□□□□□ -1.91
NIPBL-206ENST00000509429 H0YGG7 62 aa3.1□□□□□ -1.91
NIPBL-206ENST00000509429 IGLV1-51P01701 117 aa3.1□□□□□ -1.91
NIPBL-206ENST00000509429 MIFP14174 115 aa3.1□□□□□ -1.91
NIPBL-206ENST00000509429 DSCR9P59020 149 aa3.1□□□□□ -1.91
NIPBL-206ENST00000509429 SERF2P84101 59 aa3.1□□□□□ -1.91
NIPBL-206ENST00000509429 PLGLAQ15195 96 aa3.1□□□□□ -1.91
NIPBL-206ENST00000509429 C9orf116Q5BN46 136 aaPredicted RBP3.1□□□□□ -1.91
NIPBL-206ENST00000509429 CASC10Q5T4H9 136 aa3.1□□□□□ -1.91
NIPBL-206ENST00000509429 SMCR5Q8TEV8 140 aa3.1□□□□□ -1.91
NIPBL-206ENST00000509429 FAM167A-AS1Q96KT0 104 aa3.1□□□□□ -1.91
NIPBL-206ENST00000509429 FGF22Q9HCT0 170 aa3.1□□□□□ -1.91
NIPBL-206ENST00000509429 PRO1854Q9UHT4 67 aa3.1□□□□□ -1.91
NIPBL-206ENST00000509429 UBE2D4Q9Y2X8 147 aa3.1□□□□□ -1.91
NIPBL-206ENST00000509429 KIAA1549Q9HCM3 1950 aa3.1□□□□□ -1.91
NIPBL-206ENST00000509429 PCNX2A6NKB5 2137 aa3.1□□□□□ -1.91
NIPBL-206ENST00000509429 TRAV22A0A0B4J277 110 aa3.09□□□□□ -1.91
NIPBL-206ENST00000509429 IGLV5-39A0A0G2JS06 123 aa3.09□□□□□ -1.91
NIPBL-206ENST00000509429 TRBV10-3A0A0K0K1G6 114 aa3.09□□□□□ -1.91
NIPBL-206ENST00000509429 TMEM223A0PJW6 202 aa3.09□□□□□ -1.91
NIPBL-206ENST00000509429 F8WEM9 126 aa3.09□□□□□ -1.91
NIPBL-206ENST00000509429 IGHV3-13P01766 116 aa3.09□□□□□ -1.91
NIPBL-206ENST00000509429 PRR4Q16378 134 aa3.09□□□□□ -1.91
NIPBL-206ENST00000509429 C2orf82Q6UX34 121 aa3.09□□□□□ -1.91
NIPBL-206ENST00000509429 LYPD2Q6UXB3 125 aa3.09□□□□□ -1.91
NIPBL-206ENST00000509429 Q6ZRP5 223 aa3.09□□□□□ -1.91
NIPBL-206ENST00000509429 Q8N6K4 173 aa3.09□□□□□ -1.91
NIPBL-206ENST00000509429 TMEM190Q8WZ59 177 aa3.09□□□□□ -1.91
NIPBL-206ENST00000509429 RETNLBQ9BQ08 111 aa3.09□□□□□ -1.91
NIPBL-206ENST00000509429 LINC00574Q9H8X3 128 aa3.09□□□□□ -1.91
NIPBL-206ENST00000509429 DSCAMO60469 2012 aa3.09□□□□□ -1.92
NIPBL-206ENST00000509429 IGHV4-4A0A075B6R2 117 aa3.08□□□□□ -1.92
NIPBL-206ENST00000509429 B4DSR2 109 aa3.08□□□□□ -1.92
NIPBL-206ENST00000509429 E7EUB6 86 aa3.08□□□□□ -1.92
NIPBL-206ENST00000509429 ERC2-IT1O76042 136 aa3.08□□□□□ -1.92
NIPBL-206ENST00000509429 CGB3P0DN86 165 aa3.08□□□□□ -1.92
NIPBL-206ENST00000509429 CGB7P0DN87 165 aa3.08□□□□□ -1.92
NIPBL-206ENST00000509429 MGST1P10620 155 aaKnown RBP3.08□□□□□ -1.92
NIPBL-206ENST00000509429 C15orf32Q32M92 178 aa3.08□□□□□ -1.92
NIPBL-206ENST00000509429 Q8IYB0 196 aa3.08□□□□□ -1.92
NIPBL-206ENST00000509429 Q8N814 137 aa3.08□□□□□ -1.92
NIPBL-206ENST00000509429 SPTSSBQ8NFR3 76 aa3.08□□□□□ -1.92
NIPBL-206ENST00000509429 PRAC1Q96KF2 57 aa3.08□□□□□ -1.92
NIPBL-206ENST00000509429 CAMK2N2Q96S95 79 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms