RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 TRAV25A0A0B4J276 109 aa8.53□□□□□ -1.04
PRPF40B-203ENST00000508736 H3BUT2 72 aa8.53□□□□□ -1.04
PRPF40B-203ENST00000508736 ZNF56Q15929 161 aa8.53□□□□□ -1.04
PRPF40B-203ENST00000508736 FAM74A4Q5TZK3 123 aa8.53□□□□□ -1.04
PRPF40B-203ENST00000508736 ZFP2Q6ZN57 461 aa8.53□□□□□ -1.04
PRPF40B-203ENST00000508736 RAX2Q96IS3 184 aa8.53□□□□□ -1.04
PRPF40B-203ENST00000508736 TTTY13Q9BZ97 58 aa8.53□□□□□ -1.04
PRPF40B-203ENST00000508736 TP53TG1Q9Y2A0 90 aa8.53□□□□□ -1.04
PRPF40B-203ENST00000508736 SETD2Q9BYW2 2564 aaPredicted RBP8.53□□□□□ -1.04
PRPF40B-203ENST00000508736 TRBV27A0A0K0K1C4 114 aa8.53□□□□□ -1.04
PRPF40B-203ENST00000508736 SDHAF1A6NFY7 115 aa8.53□□□□□ -1.04
PRPF40B-203ENST00000508736 CD28P10747 220 aa8.53□□□□□ -1.04
PRPF40B-203ENST00000508736 TRPT1Q86TN4 253 aaKnown RBP8.53□□□□□ -1.04
PRPF40B-203ENST00000508736 TMEM61Q8N0U2 210 aa8.53□□□□□ -1.04
PRPF40B-203ENST00000508736 CEND1Q8N111 149 aa8.53□□□□□ -1.04
PRPF40B-203ENST00000508736 TM2D2Q9BX73 214 aa8.53□□□□□ -1.04
PRPF40B-203ENST00000508736 JPT2Q9H910 190 aa8.53□□□□□ -1.04
PRPF40B-203ENST00000508736 JMJD1CQ15652 2540 aa8.53□□□□□ -1.04
PRPF40B-203ENST00000508736 PRSS29PA6NIE9 313 aa8.52□□□□□ -1.05
PRPF40B-203ENST00000508736 RIPPLY3P57055 190 aa8.52□□□□□ -1.05
PRPF40B-203ENST00000508736 HERVK_113P61574 105 aa8.52□□□□□ -1.05
PRPF40B-203ENST00000508736 DEFB114Q30KQ6 69 aa8.52□□□□□ -1.05
PRPF40B-203ENST00000508736 AMTNQ6UX39 209 aa8.52□□□□□ -1.05
PRPF40B-203ENST00000508736 DUX3Q96PT4 197 aa8.52□□□□□ -1.05
PRPF40B-203ENST00000508736 TIMM17AQ99595 171 aa8.52□□□□□ -1.05
PRPF40B-203ENST00000508736 SPAG8Q99932 426 aaPredicted RBP8.52□□□□□ -1.05
PRPF40B-203ENST00000508736 MDFICQ9P1T7 246 aa8.52□□□□□ -1.05
PRPF40B-203ENST00000508736 MYMXA0A1B0GTQ4 84 aa8.51□□□□□ -1.05
PRPF40B-203ENST00000508736 E9PLD3 99 aa8.51□□□□□ -1.05
PRPF40B-203ENST00000508736 K7EP34 96 aa8.51□□□□□ -1.05
PRPF40B-203ENST00000508736 CCL24O00175 119 aa8.51□□□□□ -1.05
PRPF40B-203ENST00000508736 NEGR1Q7Z3B1 354 aa8.51□□□□□ -1.05
PRPF40B-203ENST00000508736 DYNLRB2Q8TF09 96 aa8.51□□□□□ -1.05
PRPF40B-203ENST00000508736 RAB37Q96AX2 223 aa8.51□□□□□ -1.05
PRPF40B-203ENST00000508736 AGRNO00468 2067 aa8.51□□□□□ -1.05
PRPF40B-203ENST00000508736 A0A1W2PPM0 123 aa8.51□□□□□ -1.05
PRPF40B-203ENST00000508736 FABP2P12104 132 aa8.51□□□□□ -1.05
PRPF40B-203ENST00000508736 FXYD2P54710 66 aa8.51□□□□□ -1.05
PRPF40B-203ENST00000508736 PMVKQ15126 192 aa8.51□□□□□ -1.05
PRPF40B-203ENST00000508736 RHOHQ15669 191 aa8.51□□□□□ -1.05
PRPF40B-203ENST00000508736 OR5A1Q8NGJ0 315 aa8.51□□□□□ -1.05
PRPF40B-203ENST00000508736 CITED2Q99967 270 aaPredicted RBP8.51□□□□□ -1.05
PRPF40B-203ENST00000508736 IGIPA6NJ69 53 aa8.5□□□□□ -1.05
PRPF40B-203ENST00000508736 M0QY20 66 aa8.5□□□□□ -1.05
PRPF40B-203ENST00000508736 ZNF876PQ49A33 203 aa8.5□□□□□ -1.05
PRPF40B-203ENST00000508736 MAPKAPK5-AS1Q8N8E1 139 aa8.5□□□□□ -1.05
PRPF40B-203ENST00000508736 HIST1H4GQ99525 98 aa8.5□□□□□ -1.05
PRPF40B-203ENST00000508736 ZNF256Q9Y2P7 627 aaPredicted RBP8.5□□□□□ -1.05
PRPF40B-203ENST00000508736 GAGE12BA1L429 117 aa8.49□□□□□ -1.05
PRPF40B-203ENST00000508736 CRYGDP07320 174 aa8.49□□□□□ -1.05
PRPF40B-203ENST00000508736 DEFB131AP59861 70 aa8.49□□□□□ -1.05
PRPF40B-203ENST00000508736 NSUN5P1Q3KNT7 163 aa8.49□□□□□ -1.05
PRPF40B-203ENST00000508736 UFSP1Q6NVU6 142 aa8.49□□□□□ -1.05
PRPF40B-203ENST00000508736 RNASE8Q8TDE3 154 aaKnown RBP8.49□□□□□ -1.05
PRPF40B-203ENST00000508736 CLUHP3Q96NS8 147 aa8.49□□□□□ -1.05
PRPF40B-203ENST00000508736 PRADC1Q9BSG0 188 aa8.49□□□□□ -1.05
PRPF40B-203ENST00000508736 CST9LQ9H4G1 147 aa8.49□□□□□ -1.05
PRPF40B-203ENST00000508736 NHP2Q9NX24 153 aaKnown RBP8.49□□□□□ -1.05
PRPF40B-203ENST00000508736 H3BMM0 161 aa8.49□□□□□ -1.05
PRPF40B-203ENST00000508736 PROK1P58294 105 aa8.49□□□□□ -1.05
PRPF40B-203ENST00000508736 CD300EQ496F6 205 aaPredicted RBP8.49□□□□□ -1.05
PRPF40B-203ENST00000508736 SAMD5Q5TGI4 173 aa8.49□□□□□ -1.05
PRPF40B-203ENST00000508736 MAP6D1Q9H9H5 199 aa8.49□□□□□ -1.05
PRPF40B-203ENST00000508736 SPCS1Q9Y6A9 102 aa8.49□□□□□ -1.05
PRPF40B-203ENST00000508736 KNCNA6PVL3 124 aa8.48□□□□□ -1.05
PRPF40B-203ENST00000508736 C11orf44Q8N8P7 122 aa8.48□□□□□ -1.05
PRPF40B-203ENST00000508736 I3L3M4 83 aa8.47□□□□□ -1.05
PRPF40B-203ENST00000508736 RPL39P62891 51 aaKnown RBP8.47□□□□□ -1.05
PRPF40B-203ENST00000508736 PRIMA1Q86XR5 153 aa8.47□□□□□ -1.05
PRPF40B-203ENST00000508736 EDA2RQ9HAV5 297 aa8.47□□□□□ -1.05
PRPF40B-203ENST00000508736 IGLV4-69A0A075B6H9 119 aa8.47□□□□□ -1.05
PRPF40B-203ENST00000508736 A0A1W2PRX2 142 aa8.47□□□□□ -1.05
PRPF40B-203ENST00000508736 C11orf86A6NJI1 115 aa8.47□□□□□ -1.05
PRPF40B-203ENST00000508736 ZNF815PA8K554 130 aa8.47□□□□□ -1.05
PRPF40B-203ENST00000508736 TSHBP01222 138 aa8.47□□□□□ -1.05
PRPF40B-203ENST00000508736 ZNF415Q09FC8 603 aa8.47□□□□□ -1.05
PRPF40B-203ENST00000508736 OCIAD2Q56VL3 154 aa8.47□□□□□ -1.05
PRPF40B-203ENST00000508736 PIK3CD-AS1Q5SR53 167 aa8.47□□□□□ -1.05
PRPF40B-203ENST00000508736 NAA38Q9BRA0 125 aaKnown RBP8.47□□□□□ -1.05
PRPF40B-203ENST00000508736 TRBV7-3A0A075B6L6 115 aa8.46□□□□□ -1.06
PRPF40B-203ENST00000508736 TMEM238LA0A1B0GVL6 79 aa8.46□□□□□ -1.06
PRPF40B-203ENST00000508736 A6NJY4 79 aa8.46□□□□□ -1.06
PRPF40B-203ENST00000508736 A8MWV9 139 aa8.46□□□□□ -1.06
PRPF40B-203ENST00000508736 K7ERU9 68 aa8.46□□□□□ -1.06
PRPF40B-203ENST00000508736 MORN3Q6PF18 240 aaPredicted RBP8.46□□□□□ -1.06
PRPF40B-203ENST00000508736 SCGB1D4Q6XE38 83 aa8.46□□□□□ -1.06
PRPF40B-203ENST00000508736 ADARB2-AS1A8MUL3 147 aa8.45□□□□□ -1.06
PRPF40B-203ENST00000508736 K7ERJ3 54 aa8.45□□□□□ -1.06
PRPF40B-203ENST00000508736 M0R2P5 195 aa8.45□□□□□ -1.06
PRPF40B-203ENST00000508736 CMC4P56277 68 aaPredicted RBP8.45□□□□□ -1.06
PRPF40B-203ENST00000508736 RBX1P62877 108 aa8.45□□□□□ -1.06
PRPF40B-203ENST00000508736 HIST2H2BDQ6DRA6 164 aa8.45□□□□□ -1.06
PRPF40B-203ENST00000508736 PHLDA1Q8WV24 401 aaPredicted RBP8.45□□□□□ -1.06
PRPF40B-203ENST00000508736 PTH2Q96A98 100 aa8.45□□□□□ -1.06
PRPF40B-203ENST00000508736 LINC00467Q9BRT7 94 aa8.45□□□□□ -1.06
PRPF40B-203ENST00000508736 C2CD3Q4AC94 2353 aa8.45□□□□□ -1.06
PRPF40B-203ENST00000508736 RBMY1A1P0DJD3 496 aaKnown RBP8.45□□□□□ -1.06
PRPF40B-203ENST00000508736 RBMY1CP0DJD4 496 aa8.45□□□□□ -1.06
PRPF40B-203ENST00000508736 RBMY1FQ15415 496 aaKnown RBP8.45□□□□□ -1.06
PRPF40B-203ENST00000508736 SORL1Q92673 2214 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms