RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 BAALCQ8WXS3 180 aa10.69□□□□□ -0.7
DDX41-208ENST00000507955 RBMY1BA6NDE4 496 aaKnown RBP10.69□□□□□ -0.7
DDX41-208ENST00000507955 RBMY1EA6NEQ0 496 aaKnown RBP10.69□□□□□ -0.7
DDX41-208ENST00000507955 LINC01619G3V211 115 aa10.69□□□□□ -0.7
DDX41-208ENST00000507955 RBMY1DP0C7P1 496 aaKnown RBP10.69□□□□□ -0.7
DDX41-208ENST00000507955 C12orf74Q32Q52 190 aa10.69□□□□□ -0.7
DDX41-208ENST00000507955 ORMDL2Q53FV1 153 aa10.69□□□□□ -0.7
DDX41-208ENST00000507955 ZNF256Q9Y2P7 627 aaPredicted RBP10.69□□□□□ -0.7
DDX41-208ENST00000507955 ZNF56Q15929 161 aa10.68□□□□□ -0.7
DDX41-208ENST00000507955 C9orf85Q96MD7 179 aa10.68□□□□□ -0.7
DDX41-208ENST00000507955 TEX48A0A1B0GUV7 120 aa10.68□□□□□ -0.7
DDX41-208ENST00000507955 ZNF876PQ49A33 203 aa10.68□□□□□ -0.7
DDX41-208ENST00000507955 Q8N2B8 174 aa10.68□□□□□ -0.7
DDX41-208ENST00000507955 HIST1H4GQ99525 98 aa10.68□□□□□ -0.7
DDX41-208ENST00000507955 ANK3Q12955 4377 aaKnown RBP10.68□□□□□ -0.7
DDX41-208ENST00000507955 DNAJC9-AS1A6NH13 148 aa10.67□□□□□ -0.7
DDX41-208ENST00000507955 PROK1P58294 105 aa10.67□□□□□ -0.7
DDX41-208ENST00000507955 SAMD13Q5VXD3 122 aa10.67□□□□□ -0.7
DDX41-208ENST00000507955 FOXI2Q6ZQN5 318 aa10.67□□□□□ -0.7
DDX41-208ENST00000507955 MYMXA0A1B0GTQ4 84 aa10.67□□□□□ -0.7
DDX41-208ENST00000507955 SDHAF1A6NFY7 115 aa10.67□□□□□ -0.7
DDX41-208ENST00000507955 CRYGDP07320 174 aa10.67□□□□□ -0.7
DDX41-208ENST00000507955 MORN3Q6PF18 240 aaPredicted RBP10.67□□□□□ -0.7
DDX41-208ENST00000507955 PRSS29PA6NIE9 313 aa10.66□□□□□ -0.7
DDX41-208ENST00000507955 Q9UF83 564 aa10.66□□□□□ -0.7
DDX41-208ENST00000507955 TP53TG1Q9Y2A0 90 aa10.66□□□□□ -0.7
DDX41-208ENST00000507955 OR11H12B2RN74 326 aa10.66□□□□□ -0.7
DDX41-208ENST00000507955 TSHBP01222 138 aa10.66□□□□□ -0.7
DDX41-208ENST00000507955 RPL24P83731 157 aaKnown RBP10.66□□□□□ -0.7
DDX41-208ENST00000507955 TAL2Q16559 108 aa10.66□□□□□ -0.7
DDX41-208ENST00000507955 POM121L12Q8N7R1 296 aa10.66□□□□□ -0.7
DDX41-208ENST00000507955 OR11H2Q8NH07 326 aa10.66□□□□□ -0.7
DDX41-208ENST00000507955 ZNF479Q96JC4 524 aa10.66□□□□□ -0.7
DDX41-208ENST00000507955 P0DMU3 169 aa10.65□□□□□ -0.7
DDX41-208ENST00000507955 FAM231AP0DMU4 169 aa10.65□□□□□ -0.7
DDX41-208ENST00000507955 FAM231CP0DMU5 169 aa10.65□□□□□ -0.7
DDX41-208ENST00000507955 POLR2KP53803 58 aaKnown RBP10.65□□□□□ -0.7
DDX41-208ENST00000507955 WFDC2Q14508 124 aa10.65□□□□□ -0.7
DDX41-208ENST00000507955 CD300EQ496F6 205 aaPredicted RBP10.65□□□□□ -0.7
DDX41-208ENST00000507955 ZFP2Q6ZN57 461 aa10.65□□□□□ -0.7
DDX41-208ENST00000507955 CYSLTR1Q9Y271 337 aa10.65□□□□□ -0.7
DDX41-208ENST00000507955 NACAE9PAV3 2078 aa10.65□□□□□ -0.7
DDX41-208ENST00000507955 C4orf3Q8WVX3 66 aa10.65□□□□□ -0.71
DDX41-208ENST00000507955 ODF3Q96PU9 254 aa10.65□□□□□ -0.71
DDX41-208ENST00000507955 OPRPNQ99935 248 aaPredicted RBP10.65□□□□□ -0.71
DDX41-208ENST00000507955 PRADC1Q9BSG0 188 aa10.65□□□□□ -0.71
DDX41-208ENST00000507955 H3BMG7 143 aa10.64□□□□□ -0.71
DDX41-208ENST00000507955 H3BMM0 161 aa10.64□□□□□ -0.71
DDX41-208ENST00000507955 MTURNQ8N3F0 131 aa10.64□□□□□ -0.71
DDX41-208ENST00000507955 KMT2BQ9UMN6 2715 aaPredicted RBP10.64□□□□□ -0.71
DDX41-208ENST00000507955 M0QY20 66 aa10.64□□□□□ -0.71
DDX41-208ENST00000507955 PLEKHB2Q96CS7 222 aa10.64□□□□□ -0.71
DDX41-208ENST00000507955 CD28P10747 220 aa10.63□□□□□ -0.71
DDX41-208ENST00000507955 DYNLRB2Q8TF09 96 aa10.63□□□□□ -0.71
DDX41-208ENST00000507955 RAX2Q96IS3 184 aa10.63□□□□□ -0.71
DDX41-208ENST00000507955 A0A1B0GWB2 263 aa10.62□□□□□ -0.71
DDX41-208ENST00000507955 MAP6D1Q9H9H5 199 aa10.62□□□□□ -0.71
DDX41-208ENST00000507955 IGLV4-69A0A075B6H9 119 aa10.62□□□□□ -0.71
DDX41-208ENST00000507955 RRN3P1Q2M238 152 aa10.62□□□□□ -0.71
DDX41-208ENST00000507955 DEFB114Q30KQ6 69 aa10.62□□□□□ -0.71
DDX41-208ENST00000507955 C2CD3Q4AC94 2353 aa10.62□□□□□ -0.71
DDX41-208ENST00000507955 SYT8Q8NBV8 401 aa10.61□□□□□ -0.71
DDX41-208ENST00000507955 KIR2DL4Q99706 377 aa10.61□□□□□ -0.71
DDX41-208ENST00000507955 SPANXB1Q9NS25 103 aaPredicted RBP10.61□□□□□ -0.71
DDX41-208ENST00000507955 PEMTQ9UBM1 199 aa10.61□□□□□ -0.71
DDX41-208ENST00000507955 C11orf86A6NJI1 115 aa10.61□□□□□ -0.71
DDX41-208ENST00000507955 VCYO14598 125 aa10.61□□□□□ -0.71
DDX41-208ENST00000507955 KRTAP1-1Q07627 177 aa10.61□□□□□ -0.71
DDX41-208ENST00000507955 SH2D6Q7Z4S9 175 aa10.61□□□□□ -0.71
DDX41-208ENST00000507955 YAE1D1Q9NRH1 226 aa10.61□□□□□ -0.71
DDX41-208ENST00000507955 ZNF815PA8K554 130 aa10.6□□□□□ -0.71
DDX41-208ENST00000507955 SMR3AQ99954 134 aa10.6□□□□□ -0.71
DDX41-208ENST00000507955 IGIPA6NJ69 53 aa10.6□□□□□ -0.71
DDX41-208ENST00000507955 PPP1R17O96001 155 aa10.6□□□□□ -0.71
DDX41-208ENST00000507955 CITED2Q99967 270 aaPredicted RBP10.6□□□□□ -0.71
DDX41-208ENST00000507955 PRO0461Q9UI25 63 aa10.6□□□□□ -0.71
DDX41-208ENST00000507955 IGHV3OR16-12A0A075B7B8 117 aa10.59□□□□□ -0.71
DDX41-208ENST00000507955 XCL2Q9UBD3 114 aa10.59□□□□□ -0.71
DDX41-208ENST00000507955 Q6ZSN1 163 aa10.59□□□□□ -0.71
DDX41-208ENST00000507955 OTOGQ6ZRI0 2925 aa10.59□□□□□ -0.71
DDX41-208ENST00000507955 VWFP04275 2813 aa10.58□□□□□ -0.72
DDX41-208ENST00000507955 TRBV27A0A0K0K1C4 114 aa10.58□□□□□ -0.72
DDX41-208ENST00000507955 F8W1H4 67 aa10.58□□□□□ -0.72
DDX41-208ENST00000507955 TSPEAR-AS2P59090 65 aa10.58□□□□□ -0.72
DDX41-208ENST00000507955 ETDBQ3ZM63 59 aa10.58□□□□□ -0.72
DDX41-208ENST00000507955 LINC01587Q99440 93 aa10.58□□□□□ -0.72
DDX41-208ENST00000507955 SPAG8Q99932 426 aaPredicted RBP10.58□□□□□ -0.72
DDX41-208ENST00000507955 TRGV11A0A075B6L2 103 aa10.57□□□□□ -0.72
DDX41-208ENST00000507955 ODF3L2Q3SX64 289 aa10.57□□□□□ -0.72
DDX41-208ENST00000507955 TMEM238C9JI98 176 aa10.57□□□□□ -0.72
DDX41-208ENST00000507955 PLA2G2AP14555 144 aa10.57□□□□□ -0.72
DDX41-208ENST00000507955 AZU1P20160 251 aa10.57□□□□□ -0.72
DDX41-208ENST00000507955 PGPEP1Q9NXJ5 209 aa10.57□□□□□ -0.72
DDX41-208ENST00000507955 FN1P02751 2386 aaKnown RBP10.57□□□□□ -0.72
DDX41-208ENST00000507955 HIVEP2P31629 2446 aa10.56□□□□□ -0.72
DDX41-208ENST00000507955 CCL24O00175 119 aa10.56□□□□□ -0.72
DDX41-208ENST00000507955 INSL3P51460 131 aa10.56□□□□□ -0.72
DDX41-208ENST00000507955 SCGB2A2Q13296 93 aa10.56□□□□□ -0.72
DDX41-208ENST00000507955 SCGB1D4Q6XE38 83 aa10.56□□□□□ -0.72
DDX41-208ENST00000507955 MRPL16Q9NX20 251 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms