RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 A0A1B0GU33 70 aa2.71□□□□□ -1.98
HERC4-213ENST00000506515 SDHAF1A6NFY7 115 aa2.71□□□□□ -1.98
HERC4-213ENST00000506515 GABARAPH6UMI1 98 aa2.71□□□□□ -1.98
HERC4-213ENST00000506515 PPYP01298 95 aa2.71□□□□□ -1.98
HERC4-213ENST00000506515 SMR3BP02814 79 aaPredicted RBP2.71□□□□□ -1.98
HERC4-213ENST00000506515 LPAR6P43657 344 aa2.71□□□□□ -1.98
HERC4-213ENST00000506515 XAF1Q6GPH4 301 aa2.71□□□□□ -1.98
HERC4-213ENST00000506515 DTD1Q8TEA8 209 aa2.71□□□□□ -1.98
HERC4-213ENST00000506515 URGCP-MRPS24S4R325 110 aa2.71□□□□□ -1.98
HERC4-213ENST00000506515 PNMA8CA0A1B0GUJ8 204 aa2.7□□□□□ -1.98
HERC4-213ENST00000506515 IFITM5A6NNB3 132 aa2.7□□□□□ -1.98
HERC4-213ENST00000506515 H7BYZ3 331 aa2.7□□□□□ -1.98
HERC4-213ENST00000506515 GPR31O00270 319 aa2.7□□□□□ -1.98
HERC4-213ENST00000506515 SH2D1AO60880 128 aa2.7□□□□□ -1.98
HERC4-213ENST00000506515 PGLYRP1O75594 196 aaPredicted RBP2.7□□□□□ -1.98
HERC4-213ENST00000506515 CDS2O95674 445 aa2.7□□□□□ -1.98
HERC4-213ENST00000506515 GNGT1P63211 74 aa2.7□□□□□ -1.98
HERC4-213ENST00000506515 ESRGQ1W209 222 aa2.7□□□□□ -1.98
HERC4-213ENST00000506515 FAM78BQ5VT40 261 aa2.7□□□□□ -1.98
HERC4-213ENST00000506515 KRTAP13-1Q8IUC0 172 aa2.7□□□□□ -1.98
HERC4-213ENST00000506515 OR8I2Q8N0Y5 310 aa2.7□□□□□ -1.98
HERC4-213ENST00000506515 FAM24BQ8N5W8 94 aa2.7□□□□□ -1.98
HERC4-213ENST00000506515 OR51H1Q8NH63 302 aa2.7□□□□□ -1.98
HERC4-213ENST00000506515 HIST1H2BAQ96A08 127 aa2.7□□□□□ -1.98
HERC4-213ENST00000506515 PPP1R14BQ96C90 147 aa2.7□□□□□ -1.98
HERC4-213ENST00000506515 DOK5Q9P104 306 aa2.7□□□□□ -1.98
HERC4-213ENST00000506515 A0A0J9YX75 114 aa2.69□□□□□ -1.98
HERC4-213ENST00000506515 A0A1W2PNM2 257 aa2.69□□□□□ -1.98
HERC4-213ENST00000506515 NDUFS6O75380 124 aaKnown RBP2.69□□□□□ -1.98
HERC4-213ENST00000506515 ZNF22P17026 224 aaPredicted RBP2.69□□□□□ -1.98
HERC4-213ENST00000506515 OR10J1P30954 320 aa2.69□□□□□ -1.98
HERC4-213ENST00000506515 RCVRNP35243 200 aa2.69□□□□□ -1.98
HERC4-213ENST00000506515 SUPT4H1P63272 117 aaKnown RBP2.69□□□□□ -1.98
HERC4-213ENST00000506515 C10orf91Q5T1B1 145 aa2.69□□□□□ -1.98
HERC4-213ENST00000506515 C8orf59Q8N0T1 100 aaPredicted RBP2.69□□□□□ -1.98
HERC4-213ENST00000506515 C1orf158Q8N1D5 194 aa2.69□□□□□ -1.98
HERC4-213ENST00000506515 PACRGLQ8N7B6 248 aa2.69□□□□□ -1.98
HERC4-213ENST00000506515 TMEM263Q8WUH6 116 aaKnown RBP2.69□□□□□ -1.98
HERC4-213ENST00000506515 TXNDC17Q9BRA2 123 aa2.69□□□□□ -1.98
HERC4-213ENST00000506515 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.69□□□□□ -1.98
HERC4-213ENST00000506515 TPRKBQ9Y3C4 175 aa2.69□□□□□ -1.98
HERC4-213ENST00000506515 U3KQ87 197 aa2.69□□□□□ -1.98
HERC4-213ENST00000506515 TRGV2A0A075B6R0 118 aa2.68□□□□□ -1.98
HERC4-213ENST00000506515 LECT2O14960 151 aa2.68□□□□□ -1.98
HERC4-213ENST00000506515 ORM1P02763 201 aa2.68□□□□□ -1.98
HERC4-213ENST00000506515 G6PCP35575 357 aa2.68□□□□□ -1.98
HERC4-213ENST00000506515 INPP1P49441 399 aa2.68□□□□□ -1.98
HERC4-213ENST00000506515 FXYD4P59646 89 aa2.68□□□□□ -1.98
HERC4-213ENST00000506515 SPCS3P61009 180 aa2.68□□□□□ -1.98
HERC4-213ENST00000506515 RHOBP62745 196 aa2.68□□□□□ -1.98
HERC4-213ENST00000506515 MLLT11Q13015 90 aaPredicted RBP2.68□□□□□ -1.98
HERC4-213ENST00000506515 Q6ZRN7 208 aaPredicted RBP2.68□□□□□ -1.98
HERC4-213ENST00000506515 NIT1Q86X76 327 aa2.68□□□□□ -1.98
HERC4-213ENST00000506515 IQCF2Q8IXL9 164 aa2.68□□□□□ -1.98
HERC4-213ENST00000506515 MAFIPQ8WZ33 124 aa2.68□□□□□ -1.98
HERC4-213ENST00000506515 S100A16Q96FQ6 103 aaKnown RBP2.68□□□□□ -1.98
HERC4-213ENST00000506515 NOP10Q9NPE3 64 aaKnown RBP2.68□□□□□ -1.98
HERC4-213ENST00000506515 PRO0255Q9UI72 69 aa2.68□□□□□ -1.98
HERC4-213ENST00000506515 SMIM31A0A1B0GVY4 71 aa2.67□□□□□ -1.98
HERC4-213ENST00000506515 CRYM-AS1A6NIL9 109 aa2.67□□□□□ -1.98
HERC4-213ENST00000506515 A8MTW9 85 aa2.67□□□□□ -1.98
HERC4-213ENST00000506515 C9JCJ5 164 aa2.67□□□□□ -1.98
HERC4-213ENST00000506515 KRTAP5-8O75690 187 aa2.67□□□□□ -1.98
HERC4-213ENST00000506515 IGLC1P0CG04 106 aa2.67□□□□□ -1.98
HERC4-213ENST00000506515 HTN1P15515 57 aa2.67□□□□□ -1.98
HERC4-213ENST00000506515 AKR1C2P52895 323 aa2.67□□□□□ -1.98
HERC4-213ENST00000506515 CLDN12P56749 244 aa2.67□□□□□ -1.98
HERC4-213ENST00000506515 FXYD7P58549 80 aa2.67□□□□□ -1.98
HERC4-213ENST00000506515 TAS2R20P59543 309 aa2.67□□□□□ -1.98
HERC4-213ENST00000506515 ZNF818PQ6ZRF7 136 aa2.67□□□□□ -1.98
HERC4-213ENST00000506515 Q6ZRU5 148 aa2.67□□□□□ -1.98
HERC4-213ENST00000506515 TMED4Q7Z7H5 227 aa2.67□□□□□ -1.98
HERC4-213ENST00000506515 OR10D4PQ8NGN7 298 aa2.67□□□□□ -1.98
HERC4-213ENST00000506515 RNASE11Q8TAA1 199 aaKnown RBP2.67□□□□□ -1.98
HERC4-213ENST00000506515 CYGBQ8WWM9 190 aa2.67□□□□□ -1.98
HERC4-213ENST00000506515 FAM210AQ96ND0 272 aa2.67□□□□□ -1.98
HERC4-213ENST00000506515 SLC35B3Q9H1N7 401 aa2.67□□□□□ -1.98
HERC4-213ENST00000506515 MRPL16Q9NX20 251 aaKnown RBP2.67□□□□□ -1.98
HERC4-213ENST00000506515 HHLA3Q9XRX5 114 aa2.67□□□□□ -1.98
HERC4-213ENST00000506515 TMEM56-RWDD3S4R434 201 aa2.67□□□□□ -1.98
HERC4-213ENST00000506515 A0A096LPF7 62 aa2.66□□□□□ -1.98
HERC4-213ENST00000506515 A0A0D9SG52 128 aa2.66□□□□□ -1.98
HERC4-213ENST00000506515 A0A0J9YY99 117 aa2.66□□□□□ -1.98
HERC4-213ENST00000506515 TRDV1A0A1B0GX56 115 aa2.66□□□□□ -1.98
HERC4-213ENST00000506515 FABP12A6NFH5 140 aa2.66□□□□□ -1.98
HERC4-213ENST00000506515 LTAP01374 205 aa2.66□□□□□ -1.98
HERC4-213ENST00000506515 CRYGDP07320 174 aa2.66□□□□□ -1.98
HERC4-213ENST00000506515 RPL7P18124 248 aaKnown RBP2.66□□□□□ -1.98
HERC4-213ENST00000506515 SRIP30626 198 aa2.66□□□□□ -1.98
HERC4-213ENST00000506515 POLR2GP62487 172 aaKnown RBP eCLIP2.66□□□□□ -1.98
HERC4-213ENST00000506515 OR2F1Q13607 317 aa2.66□□□□□ -1.98
HERC4-213ENST00000506515 LYPD5Q6UWN5 251 aa2.66□□□□□ -1.98
HERC4-213ENST00000506515 SCXQ7RTU7 201 aa2.66□□□□□ -1.98
HERC4-213ENST00000506515 Q8N814 137 aa2.66□□□□□ -1.98
HERC4-213ENST00000506515 PYDC1Q8WXC3 89 aa2.66□□□□□ -1.98
HERC4-213ENST00000506515 MGLLQ99685 303 aa2.66□□□□□ -1.98
HERC4-213ENST00000506515 LINC00467Q9BRT7 94 aa2.66□□□□□ -1.98
HERC4-213ENST00000506515 PBDC1Q9BVG4 233 aa2.66□□□□□ -1.98
HERC4-213ENST00000506515 MRPL32Q9BYC8 188 aaKnown RBP2.66□□□□□ -1.98
HERC4-213ENST00000506515 LRP2P98164 4655 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms