RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 PPBPP02775 128 aa7.2□□□□□ -1.26
RFC1-210ENST00000505077 CEMP1Q6PRD7 247 aaPredicted RBP7.2□□□□□ -1.26
RFC1-210ENST00000505077 SH2D6Q7Z4S9 175 aa7.2□□□□□ -1.26
RFC1-210ENST00000505077 CBLN2Q8IUK8 224 aa7.2□□□□□ -1.26
RFC1-210ENST00000505077 SLC25A29Q8N8R3 303 aa7.2□□□□□ -1.26
RFC1-210ENST00000505077 IGHV3-73A0A0B4J1V6 119 aa7.19□□□□□ -1.26
RFC1-210ENST00000505077 M0QY20 66 aa7.19□□□□□ -1.26
RFC1-210ENST00000505077 RAB4AP20338 218 aa7.19□□□□□ -1.26
RFC1-210ENST00000505077 SUMO4Q6EEV6 95 aa7.19□□□□□ -1.26
RFC1-210ENST00000505077 AMN1Q8IY45 258 aa7.19□□□□□ -1.26
RFC1-210ENST00000505077 DNAJC30Q96LL9 226 aa7.19□□□□□ -1.26
RFC1-210ENST00000505077 TGIF2-C20orf24A0A0A6YYL0 155 aa7.18□□□□□ -1.26
RFC1-210ENST00000505077 RPL36AP83881 106 aaKnown RBP7.18□□□□□ -1.26
RFC1-210ENST00000505077 MRPL23Q16540 153 aaKnown RBP7.18□□□□□ -1.26
RFC1-210ENST00000505077 TMEM136Q6ZRR5 245 aa7.18□□□□□ -1.26
RFC1-210ENST00000505077 Q6ZSN1 163 aa7.18□□□□□ -1.26
RFC1-210ENST00000505077 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.18□□□□□ -1.26
RFC1-210ENST00000505077 RPL36ALQ969Q0 106 aaKnown RBP7.18□□□□□ -1.26
RFC1-210ENST00000505077 RNF185Q96GF1 192 aa7.18□□□□□ -1.26
RFC1-210ENST00000505077 VSIG2Q96IQ7 327 aa7.18□□□□□ -1.26
RFC1-210ENST00000505077 LAMTOR2Q9Y2Q5 125 aa7.18□□□□□ -1.26
RFC1-210ENST00000505077 ICOSQ9Y6W8 199 aa7.18□□□□□ -1.26
RFC1-210ENST00000505077 TRBV7-3A0A075B6L6 115 aa7.17□□□□□ -1.26
RFC1-210ENST00000505077 PHOX2AO14813 284 aa7.17□□□□□ -1.26
RFC1-210ENST00000505077 LINC00694P0DN24 101 aa7.17□□□□□ -1.26
RFC1-210ENST00000505077 GYPEP15421 78 aa7.17□□□□□ -1.26
RFC1-210ENST00000505077 SRIP30626 198 aa7.17□□□□□ -1.26
RFC1-210ENST00000505077 MRPL51Q4U2R6 128 aaKnown RBP7.17□□□□□ -1.26
RFC1-210ENST00000505077 ORMDL3Q8N138 153 aa7.17□□□□□ -1.26
RFC1-210ENST00000505077 NIT2Q9NQR4 276 aa7.17□□□□□ -1.26
RFC1-210ENST00000505077 A0A0J9YY99 117 aa7.16□□□□□ -1.26
RFC1-210ENST00000505077 TRBV6-5A0A0K0K1A5 114 aa7.16□□□□□ -1.26
RFC1-210ENST00000505077 IGLL5B9A064 214 aa7.16□□□□□ -1.26
RFC1-210ENST00000505077 APCSP02743 223 aa7.16□□□□□ -1.26
RFC1-210ENST00000505077 CKS2P33552 79 aa7.16□□□□□ -1.26
RFC1-210ENST00000505077 DYNC2H1Q8NCM8 4307 aaKnown RBP7.16□□□□□ -1.26
RFC1-210ENST00000505077 STARD9Q9P2P6 4700 aa7.16□□□□□ -1.26
RFC1-210ENST00000505077 TRAV26-2A0A0B4J265 109 aa7.15□□□□□ -1.26
RFC1-210ENST00000505077 D6R8Y8 96 aa7.15□□□□□ -1.26
RFC1-210ENST00000505077 TIRAPP58753 221 aa7.15□□□□□ -1.26
RFC1-210ENST00000505077 OR10J3Q5JRS4 329 aa7.15□□□□□ -1.26
RFC1-210ENST00000505077 DAZ4Q86SG3 579 aaKnown RBP7.15□□□□□ -1.26
RFC1-210ENST00000505077 NEXN-AS1Q8NBZ9 246 aa7.15□□□□□ -1.26
RFC1-210ENST00000505077 C20orf78Q9BR46 151 aa7.15□□□□□ -1.26
RFC1-210ENST00000505077 DAZ3Q9NR90 486 aaKnown RBP7.15□□□□□ -1.26
RFC1-210ENST00000505077 TNFRSF18Q9Y5U5 241 aa7.15□□□□□ -1.26
RFC1-210ENST00000505077 A0A096LPF7 62 aa7.14□□□□□ -1.27
RFC1-210ENST00000505077 COLCA2A8K830 154 aa7.14□□□□□ -1.27
RFC1-210ENST00000505077 SCO1O75880 301 aa7.14□□□□□ -1.27
RFC1-210ENST00000505077 UBE2D3P61077 147 aa7.14□□□□□ -1.27
RFC1-210ENST00000505077 UBE2D2P62837 147 aa7.14□□□□□ -1.27
RFC1-210ENST00000505077 RPL32P62910 135 aaKnown RBP7.14□□□□□ -1.27
RFC1-210ENST00000505077 TMEM97Q5BJF2 176 aa7.14□□□□□ -1.27
RFC1-210ENST00000505077 CASC10Q5T4H9 136 aa7.14□□□□□ -1.27
RFC1-210ENST00000505077 NEGR1Q7Z3B1 354 aa7.14□□□□□ -1.27
RFC1-210ENST00000505077 NRACQ8N912 160 aa7.14□□□□□ -1.27
RFC1-210ENST00000505077 ST20Q9HBF5 79 aa7.14□□□□□ -1.27
RFC1-210ENST00000505077 TRAPPC1Q9Y5R8 145 aa7.14□□□□□ -1.27
RFC1-210ENST00000505077 PRSS47A8MTI9 375 aa7.13□□□□□ -1.27
RFC1-210ENST00000505077 LCE2BO14633 110 aa7.13□□□□□ -1.27
RFC1-210ENST00000505077 TCAPO15273 167 aa7.13□□□□□ -1.27
RFC1-210ENST00000505077 TNFRSF6BO95407 300 aa7.13□□□□□ -1.27
RFC1-210ENST00000505077 NCR2O95944 276 aa7.13□□□□□ -1.27
RFC1-210ENST00000505077 NUDT3O95989 172 aa7.13□□□□□ -1.27
RFC1-210ENST00000505077 P0DMU3 169 aa7.13□□□□□ -1.27
RFC1-210ENST00000505077 FAM231AP0DMU4 169 aa7.13□□□□□ -1.27
RFC1-210ENST00000505077 FAM231CP0DMU5 169 aa7.13□□□□□ -1.27
RFC1-210ENST00000505077 RAB5AP20339 215 aa7.13□□□□□ -1.27
RFC1-210ENST00000505077 SUMO2P61956 95 aaKnown RBP7.13□□□□□ -1.27
RFC1-210ENST00000505077 ZFAND6Q6FIF0 208 aa7.13□□□□□ -1.27
RFC1-210ENST00000505077 CFAP161Q6P656 301 aa7.13□□□□□ -1.27
RFC1-210ENST00000505077 ZNRF2Q8NHG8 242 aa7.13□□□□□ -1.27
RFC1-210ENST00000505077 RPL39LQ96EH5 51 aaKnown RBP7.13□□□□□ -1.27
RFC1-210ENST00000505077 PRELID3AQ96N28 172 aa7.13□□□□□ -1.27
RFC1-210ENST00000505077 APLNQ9ULZ1 77 aa7.13□□□□□ -1.27
RFC1-210ENST00000505077 LOC100131303A0A0U1RQF7 123 aa7.12□□□□□ -1.27
RFC1-210ENST00000505077 GAGE12JA6NER3 117 aa7.12□□□□□ -1.27
RFC1-210ENST00000505077 SDHAF1A6NFY7 115 aa7.12□□□□□ -1.27
RFC1-210ENST00000505077 RPS10P46783 165 aaKnown RBP7.12□□□□□ -1.27
RFC1-210ENST00000505077 FABP9Q0Z7S8 132 aa7.12□□□□□ -1.27
RFC1-210ENST00000505077 GAGE1Q13065 139 aa7.12□□□□□ -1.27
RFC1-210ENST00000505077 GAGE4Q13068 117 aa7.12□□□□□ -1.27
RFC1-210ENST00000505077 GAGE5Q13069 117 aa7.12□□□□□ -1.27
RFC1-210ENST00000505077 GAGE13Q4V321 117 aa7.12□□□□□ -1.27
RFC1-210ENST00000505077 ATP6V0E2Q8NHE4 81 aa7.12□□□□□ -1.27
RFC1-210ENST00000505077 TMEM70Q9BUB7 260 aa7.12□□□□□ -1.27
RFC1-210ENST00000505077 GTSF1LQ9H1H1 148 aa7.12□□□□□ -1.27
RFC1-210ENST00000505077 TRBV27A0A0K0K1C4 114 aa7.11□□□□□ -1.27
RFC1-210ENST00000505077 SMKR1H3BMG3 65 aa7.11□□□□□ -1.27
RFC1-210ENST00000505077 K7EMI3 77 aa7.11□□□□□ -1.27
RFC1-210ENST00000505077 PMCHP20382 165 aa7.11□□□□□ -1.27
RFC1-210ENST00000505077 CCL18P55774 89 aa7.11□□□□□ -1.27
RFC1-210ENST00000505077 SMIM2Q9BVW6 85 aa7.11□□□□□ -1.27
RFC1-210ENST00000505077 MAP1LC3AQ9H492 121 aa7.11□□□□□ -1.27
RFC1-210ENST00000505077 Q9UF83 564 aa7.11□□□□□ -1.27
RFC1-210ENST00000505077 LYSTQ99698 3801 aa7.1□□□□□ -1.27
RFC1-210ENST00000505077 I3L3M4 83 aa7.1□□□□□ -1.27
RFC1-210ENST00000505077 VCYO14598 125 aa7.1□□□□□ -1.27
RFC1-210ENST00000505077 GAS8-AS1O95177 125 aa7.1□□□□□ -1.27
RFC1-210ENST00000505077 NPYP01303 97 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms