RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 ACACAQ13085 2346 aa3.57□□□□□ -1.84
NEDD4-203ENST00000502612 LY6EQ16553 131 aa3.57□□□□□ -1.84
NEDD4-203ENST00000502612 MPV17L2Q567V2 206 aa3.57□□□□□ -1.84
NEDD4-203ENST00000502612 PSMG4Q5JS54 123 aa3.57□□□□□ -1.84
NEDD4-203ENST00000502612 ARFGEF3Q5TH69 2177 aa3.57□□□□□ -1.84
NEDD4-203ENST00000502612 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.57□□□□□ -1.84
NEDD4-203ENST00000502612 FER1L6-AS1Q8NA97 138 aa3.57□□□□□ -1.84
NEDD4-203ENST00000502612 OR4X2Q8NGF9 303 aa3.57□□□□□ -1.84
NEDD4-203ENST00000502612 C18orf32Q8TCD1 76 aa3.57□□□□□ -1.84
NEDD4-203ENST00000502612 VAMP8Q9BV40 100 aa3.57□□□□□ -1.84
NEDD4-203ENST00000502612 DAZ1Q9NQZ3 744 aaKnown RBP3.57□□□□□ -1.84
NEDD4-203ENST00000502612 PEF1Q9UBV8 284 aaKnown RBP3.57□□□□□ -1.84
NEDD4-203ENST00000502612 PTPRQQ9UMZ3 2332 aa3.57□□□□□ -1.84
NEDD4-203ENST00000502612 POLEQ07864 2286 aa3.56□□□□□ -1.84
NEDD4-203ENST00000502612 IGKV2-40A0A087WW87 121 aaPredicted RBP3.56□□□□□ -1.84
NEDD4-203ENST00000502612 TRAV21A0A0B4J279 112 aa3.56□□□□□ -1.84
NEDD4-203ENST00000502612 IGHV7-4-1A0A0J9YVY3 117 aa3.56□□□□□ -1.84
NEDD4-203ENST00000502612 HSBP1L1C9JCN9 74 aa3.56□□□□□ -1.84
NEDD4-203ENST00000502612 NDUFC2-KCTD14E9PQ53 114 aa3.56□□□□□ -1.84
NEDD4-203ENST00000502612 LEPROTL1O95214 131 aa3.56□□□□□ -1.84
NEDD4-203ENST00000502612 IGKV2D-40P01614 121 aaPredicted RBP3.56□□□□□ -1.84
NEDD4-203ENST00000502612 NTF3P20783 257 aa3.56□□□□□ -1.84
NEDD4-203ENST00000502612 LINC00322Q6ZN03 302 aaPredicted RBP3.56□□□□□ -1.84
NEDD4-203ENST00000502612 FA2HQ7L5A8 372 aa3.56□□□□□ -1.84
NEDD4-203ENST00000502612 NIT1Q86X76 327 aa3.56□□□□□ -1.84
NEDD4-203ENST00000502612 GPHB5Q86YW7 130 aa3.56□□□□□ -1.84
NEDD4-203ENST00000502612 ORMDL3Q8N138 153 aa3.56□□□□□ -1.84
NEDD4-203ENST00000502612 TMEM86BQ8N661 226 aa3.56□□□□□ -1.84
NEDD4-203ENST00000502612 ZNF738Q8NE65 137 aa3.56□□□□□ -1.84
NEDD4-203ENST00000502612 TMEM70Q9BUB7 260 aa3.56□□□□□ -1.84
NEDD4-203ENST00000502612 MAP1LC3CQ9BXW4 147 aa3.56□□□□□ -1.84
NEDD4-203ENST00000502612 VPREB3Q9UKI3 123 aa3.56□□□□□ -1.84
NEDD4-203ENST00000502612 TPRP12270 2363 aaKnown RBP3.56□□□□□ -1.84
NEDD4-203ENST00000502612 ZFHX4Q86UP3 3567 aa3.56□□□□□ -1.84
NEDD4-203ENST00000502612 PLCE1Q9P212 2302 aa3.55□□□□□ -1.84
NEDD4-203ENST00000502612 CLPSL1A2RUU4 121 aa3.55□□□□□ -1.84
NEDD4-203ENST00000502612 LINC00587B1AMM8 73 aa3.55□□□□□ -1.84
NEDD4-203ENST00000502612 PPP1R17O96001 155 aa3.55□□□□□ -1.84
NEDD4-203ENST00000502612 G0S2P27469 103 aa3.55□□□□□ -1.84
NEDD4-203ENST00000502612 PSMB8P28062 276 aa3.55□□□□□ -1.84
NEDD4-203ENST00000502612 CKS2P33552 79 aa3.55□□□□□ -1.84
NEDD4-203ENST00000502612 SNRPD3P62318 126 aaKnown RBP3.55□□□□□ -1.84
NEDD4-203ENST00000502612 CTAG1AP78358 180 aa3.55□□□□□ -1.84
NEDD4-203ENST00000502612 DEFB112Q30KQ8 113 aa3.55□□□□□ -1.84
NEDD4-203ENST00000502612 FAM104BQ5XKR9 115 aa3.55□□□□□ -1.84
NEDD4-203ENST00000502612 LYZL1Q6UWQ5 148 aa3.55□□□□□ -1.84
NEDD4-203ENST00000502612 ZNF664Q8N3J9 261 aa3.55□□□□□ -1.84
NEDD4-203ENST00000502612 OR10AG1Q8NH19 301 aa3.55□□□□□ -1.84
NEDD4-203ENST00000502612 UBE2E2Q96LR5 201 aa3.55□□□□□ -1.84
NEDD4-203ENST00000502612 C20orf144Q9BQM9 153 aa3.55□□□□□ -1.84
NEDD4-203ENST00000502612 RHPN1-AS1Q9BWJ2 59 aa3.55□□□□□ -1.84
NEDD4-203ENST00000502612 CNFNQ9BYD5 112 aa3.55□□□□□ -1.84
NEDD4-203ENST00000502612 TMEM191AQ9H0A3 160 aa3.55□□□□□ -1.84
NEDD4-203ENST00000502612 SMPXQ9UHP9 88 aa3.55□□□□□ -1.84
NEDD4-203ENST00000502612 ANKHD1Q8IWZ3 2542 aaKnown RBP3.55□□□□□ -1.84
NEDD4-203ENST00000502612 NCOR2Q9Y618 2525 aa3.54□□□□□ -1.84
NEDD4-203ENST00000502612 MALRD1Q5VYJ5 2156 aa3.54□□□□□ -1.84
NEDD4-203ENST00000502612 LINC01549A6NIU2 74 aa3.54□□□□□ -1.84
NEDD4-203ENST00000502612 K7EMI3 77 aa3.54□□□□□ -1.84
NEDD4-203ENST00000502612 M0R143 59 aa3.54□□□□□ -1.84
NEDD4-203ENST00000502612 LGALS9O00182 355 aa3.54□□□□□ -1.84
NEDD4-203ENST00000502612 CRXO43186 299 aaPredicted RBP3.54□□□□□ -1.84
NEDD4-203ENST00000502612 NUPR1O60356 82 aa3.54□□□□□ -1.84
NEDD4-203ENST00000502612 ARMS2P0C7Q2 107 aa3.54□□□□□ -1.84
NEDD4-203ENST00000502612 IGLC6P0CF74 106 aa3.54□□□□□ -1.84
NEDD4-203ENST00000502612 S100A4P26447 101 aaKnown RBP3.54□□□□□ -1.84
NEDD4-203ENST00000502612 TSPOP30536 169 aa3.54□□□□□ -1.84
NEDD4-203ENST00000502612 CRIP1P50238 77 aa3.54□□□□□ -1.84
NEDD4-203ENST00000502612 BLCAPP62952 87 aa3.54□□□□□ -1.84
NEDD4-203ENST00000502612 GDF5OSQ5U4N7 250 aa3.54□□□□□ -1.84
NEDD4-203ENST00000502612 APRG1Q8IVJ8 170 aa3.54□□□□□ -1.84
NEDD4-203ENST00000502612 PRELID3AQ96N28 172 aa3.54□□□□□ -1.84
NEDD4-203ENST00000502612 MIEN1Q9BRT3 115 aa3.54□□□□□ -1.84
NEDD4-203ENST00000502612 AGPAT4-IT1Q9H0P7 198 aa3.54□□□□□ -1.84
NEDD4-203ENST00000502612 MAP1LC3AQ9H492 121 aa3.54□□□□□ -1.84
NEDD4-203ENST00000502612 NXT2Q9NPJ8 142 aaKnown RBP3.54□□□□□ -1.84
NEDD4-203ENST00000502612 C8orf17Q9NRJ1 99 aa3.54□□□□□ -1.84
NEDD4-203ENST00000502612 UQCR10Q9UDW1 63 aa3.54□□□□□ -1.84
NEDD4-203ENST00000502612 LINC00527Q9UJ94 153 aa3.54□□□□□ -1.84
NEDD4-203ENST00000502612 U3KQK5 164 aa3.54□□□□□ -1.84
NEDD4-203ENST00000502612 DMXL1Q9Y485 3027 aa3.54□□□□□ -1.84
NEDD4-203ENST00000502612 DOCK11Q5JSL3 2073 aa3.53□□□□□ -1.84
NEDD4-203ENST00000502612 IGHV3OR16-8A0A075B7F1 116 aa3.53□□□□□ -1.84
NEDD4-203ENST00000502612 TMSB15BA0A087X1C1 80 aa3.53□□□□□ -1.84
NEDD4-203ENST00000502612 A0A096LNT2 108 aa3.53□□□□□ -1.84
NEDD4-203ENST00000502612 TRAV8-2A0A0B4J237 113 aa3.53□□□□□ -1.84
NEDD4-203ENST00000502612 TCF21O43680 179 aa3.53□□□□□ -1.84
NEDD4-203ENST00000502612 IGHV3-11P01762 117 aa3.53□□□□□ -1.84
NEDD4-203ENST00000502612 PRB1P04280 392 aa3.53□□□□□ -1.84
NEDD4-203ENST00000502612 LGALS1P09382 135 aaKnown RBP3.53□□□□□ -1.84
NEDD4-203ENST00000502612 C3orf79P0CE67 100 aa3.53□□□□□ -1.84
NEDD4-203ENST00000502612 PFN2P35080 140 aa3.53□□□□□ -1.84
NEDD4-203ENST00000502612 ASIPP42127 132 aa3.53□□□□□ -1.84
NEDD4-203ENST00000502612 RNASE13Q5GAN3 156 aaKnown RBP3.53□□□□□ -1.84
NEDD4-203ENST00000502612 SPANXN1Q5VSR9 72 aa3.53□□□□□ -1.84
NEDD4-203ENST00000502612 EBLN2Q6P2I7 272 aa3.53□□□□□ -1.84
NEDD4-203ENST00000502612 ZNF705AQ6ZN79 300 aaPredicted RBP3.53□□□□□ -1.84
NEDD4-203ENST00000502612 RNF182Q8N6D2 247 aa3.53□□□□□ -1.84
NEDD4-203ENST00000502612 OR8A1Q8NGG7 326 aa3.53□□□□□ -1.84
NEDD4-203ENST00000502612 Q8TAT8 98 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 177.3 ms