RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 GRNP28799 593 aaKnown RBP9.84□□□□□ -0.83
GAPVD1-220ENST00000497580 DAND5Q8N907 189 aa9.84□□□□□ -0.83
GAPVD1-220ENST00000497580 CSDC2Q9Y534 153 aaKnown RBP9.84□□□□□ -0.83
GAPVD1-220ENST00000497580 IGHV4-4A0A075B6R2 117 aa9.84□□□□□ -0.83
GAPVD1-220ENST00000497580 C20orf173Q96LM9 149 aa9.84□□□□□ -0.83
GAPVD1-220ENST00000497580 FAM208BQ5VWN6 2430 aa9.84□□□□□ -0.83
GAPVD1-220ENST00000497580 GPHB5Q86YW7 130 aa9.84□□□□□ -0.83
GAPVD1-220ENST00000497580 TRAV41A0A0B4J266 112 aa9.83□□□□□ -0.84
GAPVD1-220ENST00000497580 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.83□□□□□ -0.84
GAPVD1-220ENST00000497580 SUMO4Q6EEV6 95 aa9.83□□□□□ -0.84
GAPVD1-220ENST00000497580 EDA2RQ9HAV5 297 aa9.83□□□□□ -0.84
GAPVD1-220ENST00000497580 POLQO75417 2590 aa9.83□□□□□ -0.84
GAPVD1-220ENST00000497580 IGHV3OR16-10A0A075B7F0 116 aa9.83□□□□□ -0.84
GAPVD1-220ENST00000497580 A8MZ25 164 aa9.83□□□□□ -0.84
GAPVD1-220ENST00000497580 HERVK_113P63121 156 aa9.83□□□□□ -0.84
GAPVD1-220ENST00000497580 ZFAND3Q9H8U3 227 aa9.83□□□□□ -0.84
GAPVD1-220ENST00000497580 VCYO14598 125 aa9.82□□□□□ -0.84
GAPVD1-220ENST00000497580 NPFFO15130 113 aa9.82□□□□□ -0.84
GAPVD1-220ENST00000497580 LEPROTO15243 131 aa9.82□□□□□ -0.84
GAPVD1-220ENST00000497580 ZNF876PQ49A33 203 aa9.82□□□□□ -0.84
GAPVD1-220ENST00000497580 PRRC2AP48634 2157 aaKnown RBP9.82□□□□□ -0.84
GAPVD1-220ENST00000497580 A0A0J9YXY3 114 aa9.82□□□□□ -0.84
GAPVD1-220ENST00000497580 CLPSL1A2RUU4 121 aa9.82□□□□□ -0.84
GAPVD1-220ENST00000497580 LY6LH3BQJ8 138 aa9.82□□□□□ -0.84
GAPVD1-220ENST00000497580 C9orf47Q6ZRZ4 202 aa9.82□□□□□ -0.84
GAPVD1-220ENST00000497580 WNK1Q9H4A3 2382 aa9.82□□□□□ -0.84
GAPVD1-220ENST00000497580 NACAE9PAV3 2078 aa9.81□□□□□ -0.84
GAPVD1-220ENST00000497580 IGHV1-69DA0A0B4J2H0 117 aa9.81□□□□□ -0.84
GAPVD1-220ENST00000497580 TMEM141Q96I45 108 aa9.81□□□□□ -0.84
GAPVD1-220ENST00000497580 PPP1R17O96001 155 aa9.81□□□□□ -0.84
GAPVD1-220ENST00000497580 IGHV7-81A0A0B4J1V7 117 aa9.81□□□□□ -0.84
GAPVD1-220ENST00000497580 IGKV3-20P01619 116 aa9.81□□□□□ -0.84
GAPVD1-220ENST00000497580 ZFAND2AQ8N6M9 145 aa9.81□□□□□ -0.84
GAPVD1-220ENST00000497580 ACACBO00763 2458 aa9.8□□□□□ -0.84
GAPVD1-220ENST00000497580 TRBV30A0A0K0K1B3 111 aa9.8□□□□□ -0.84
GAPVD1-220ENST00000497580 TMEM223A0PJW6 202 aa9.8□□□□□ -0.84
GAPVD1-220ENST00000497580 ATP6V0E1O15342 81 aa9.8□□□□□ -0.84
GAPVD1-220ENST00000497580 NDUFA7O95182 113 aa9.8□□□□□ -0.84
GAPVD1-220ENST00000497580 NPBQ8NG41 125 aa9.8□□□□□ -0.84
GAPVD1-220ENST00000497580 LINC00477Q96M19 166 aa9.8□□□□□ -0.84
GAPVD1-220ENST00000497580 MUC4Q99102 2169 aa9.79□□□□□ -0.84
GAPVD1-220ENST00000497580 SONP18583 2426 aaKnown RBP9.79□□□□□ -0.84
GAPVD1-220ENST00000497580 RNASE3P12724 160 aaKnown RBP9.79□□□□□ -0.84
GAPVD1-220ENST00000497580 KLRB1Q12918 225 aa9.79□□□□□ -0.84
GAPVD1-220ENST00000497580 TIMM21Q9BVV7 248 aa9.79□□□□□ -0.84
GAPVD1-220ENST00000497580 SPANXA1Q9NS26 97 aa9.79□□□□□ -0.84
GAPVD1-220ENST00000497580 USP9XQ93008 2570 aaPredicted RBP9.79□□□□□ -0.84
GAPVD1-220ENST00000497580 HIVEP3Q5T1R4 2406 aa9.79□□□□□ -0.84
GAPVD1-220ENST00000497580 ADAMTSL4-AS1Q5T5F5 129 aa9.79□□□□□ -0.84
GAPVD1-220ENST00000497580 NRGNQ92686 78 aa9.79□□□□□ -0.84
GAPVD1-220ENST00000497580 CCDC140Q96MF4 163 aa9.79□□□□□ -0.84
GAPVD1-220ENST00000497580 TIMM17AQ99595 171 aa9.79□□□□□ -0.84
GAPVD1-220ENST00000497580 H3BT86 120 aa9.79□□□□□ -0.84
GAPVD1-220ENST00000497580 I3L3M4 83 aa9.79□□□□□ -0.84
GAPVD1-220ENST00000497580 FAM19A5Q7Z5A7 132 aaPredicted RBP9.79□□□□□ -0.84
GAPVD1-220ENST00000497580 VMO1Q7Z5L0 202 aa9.79□□□□□ -0.84
GAPVD1-220ENST00000497580 IGHV3-30-3P0DP02 117 aa9.78□□□□□ -0.84
GAPVD1-220ENST00000497580 C3orf22Q8N5N4 141 aa9.78□□□□□ -0.84
GAPVD1-220ENST00000497580 DNAJC30Q96LL9 226 aa9.78□□□□□ -0.84
GAPVD1-220ENST00000497580 ZNF625Q96I27 306 aaPredicted RBP9.78□□□□□ -0.84
GAPVD1-220ENST00000497580 NDUFA12Q9UI09 145 aa9.78□□□□□ -0.84
GAPVD1-220ENST00000497580 POLR2KP53803 58 aaKnown RBP9.77□□□□□ -0.85
GAPVD1-220ENST00000497580 IGFL2Q6UWQ7 119 aa9.77□□□□□ -0.85
GAPVD1-220ENST00000497580 CD28P10747 220 aa9.77□□□□□ -0.85
GAPVD1-220ENST00000497580 GAGE2AQ6NT46 116 aa9.77□□□□□ -0.85
GAPVD1-220ENST00000497580 C5orf47Q569G3 176 aa9.77□□□□□ -0.85
GAPVD1-220ENST00000497580 IGHV3-73A0A0B4J1V6 119 aa9.76□□□□□ -0.85
GAPVD1-220ENST00000497580 SMIM9A6NGZ8 99 aa9.76□□□□□ -0.85
GAPVD1-220ENST00000497580 HTN1P15515 57 aa9.76□□□□□ -0.85
GAPVD1-220ENST00000497580 hADV29S1A0JD25 119 aa9.76□□□□□ -0.85
GAPVD1-220ENST00000497580 C9orf139Q6ZV77 190 aa9.76□□□□□ -0.85
GAPVD1-220ENST00000497580 IGHV3-11P01762 117 aa9.75□□□□□ -0.85
GAPVD1-220ENST00000497580 TRBV7-7A0A0K0K1E9 115 aa9.75□□□□□ -0.85
GAPVD1-220ENST00000497580 J3KT08 172 aa9.75□□□□□ -0.85
GAPVD1-220ENST00000497580 LST1O00453 97 aa9.74□□□□□ -0.85
GAPVD1-220ENST00000497580 CCL21O00585 134 aa9.74□□□□□ -0.85
GAPVD1-220ENST00000497580 RHOHQ15669 191 aa9.74□□□□□ -0.85
GAPVD1-220ENST00000497580 TMEM219Q86XT9 240 aa9.74□□□□□ -0.85
GAPVD1-220ENST00000497580 SMCR5Q8TEV8 140 aa9.74□□□□□ -0.85
GAPVD1-220ENST00000497580 UNQ9165/PRO28630Q6UXU0 137 aa9.74□□□□□ -0.85
GAPVD1-220ENST00000497580 TRAV13-1A0A0B4J241 112 aa9.74□□□□□ -0.85
GAPVD1-220ENST00000497580 UQCRQO14949 82 aa9.74□□□□□ -0.85
GAPVD1-220ENST00000497580 MYO18BQ8IUG5 2567 aa9.73□□□□□ -0.85
GAPVD1-220ENST00000497580 M0R1W7 72 aa9.73□□□□□ -0.85
GAPVD1-220ENST00000497580 FAM110DQ8TAY7 271 aaPredicted RBP9.73□□□□□ -0.85
GAPVD1-220ENST00000497580 LINC00315P59091 139 aa9.73□□□□□ -0.85
GAPVD1-220ENST00000497580 EBI3Q14213 229 aa9.73□□□□□ -0.85
GAPVD1-220ENST00000497580 NSUN5P1Q3KNT7 163 aa9.73□□□□□ -0.85
GAPVD1-220ENST00000497580 Q8N9W7 124 aa9.73□□□□□ -0.85
GAPVD1-220ENST00000497580 TRAV12-2A0A075B6T6 113 aa9.73□□□□□ -0.85
GAPVD1-220ENST00000497580 TRBV12-3P01733 135 aa9.72□□□□□ -0.85
GAPVD1-220ENST00000497580 MRPL53Q96EL3 112 aaKnown RBP9.72□□□□□ -0.85
GAPVD1-220ENST00000497580 POM121L12Q8N7R1 296 aa9.72□□□□□ -0.85
GAPVD1-220ENST00000497580 ZFYVE26Q68DK2 2539 aa9.72□□□□□ -0.85
GAPVD1-220ENST00000497580 FAM240AA0A1B0GVK7 77 aa9.72□□□□□ -0.85
GAPVD1-220ENST00000497580 IGLV4-3A0A075B6K6 122 aa9.71□□□□□ -0.85
GAPVD1-220ENST00000497580 OVOL1O14753 267 aa9.71□□□□□ -0.85
GAPVD1-220ENST00000497580 COL27A1Q8IZC6 1860 aaPredicted RBP9.71□□□□□ -0.85
GAPVD1-220ENST00000497580 CCDC168Q8NDH2 2452 aa9.71□□□□□ -0.85
GAPVD1-220ENST00000497580 B9A039 149 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms