RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 FABP9Q0Z7S8 132 aa8.2□□□□□ -1.1
CSNK1E-212ENST00000494610 FAM104BQ5XKR9 115 aa8.2□□□□□ -1.1
CSNK1E-212ENST00000494610 ZFP2Q6ZN57 461 aa8.2□□□□□ -1.1
CSNK1E-212ENST00000494610 C18orf15Q96N68 181 aa8.2□□□□□ -1.1
CSNK1E-212ENST00000494610 MRPL16Q9NX20 251 aaKnown RBP8.2□□□□□ -1.1
CSNK1E-212ENST00000494610 LAMTOR2Q9Y2Q5 125 aa8.2□□□□□ -1.1
CSNK1E-212ENST00000494610 DMBT1Q9UGM3 2413 aaPredicted RBP8.2□□□□□ -1.1
CSNK1E-212ENST00000494610 H7C1H1 209 aa8.19□□□□□ -1.1
CSNK1E-212ENST00000494610 MGPP08493 103 aa8.19□□□□□ -1.1
CSNK1E-212ENST00000494610 RAB5BP61020 215 aa8.19□□□□□ -1.1
CSNK1E-212ENST00000494610 SSTP61278 116 aa8.19□□□□□ -1.1
CSNK1E-212ENST00000494610 OR4C5Q8NGB2 326 aa8.19□□□□□ -1.1
CSNK1E-212ENST00000494610 NBDYA0A0U1RRE5 68 aa8.18□□□□□ -1.1
CSNK1E-212ENST00000494610 RS1O15537 224 aa8.18□□□□□ -1.1
CSNK1E-212ENST00000494610 EVI2AP22794 236 aa8.18□□□□□ -1.1
CSNK1E-212ENST00000494610 FUSP35637 526 aaKnown RBP eCLIP8.18□□□□□ -1.1
CSNK1E-212ENST00000494610 KRTAP10-2P60368 255 aa8.18□□□□□ -1.1
CSNK1E-212ENST00000494610 ZNF56Q15929 161 aa8.18□□□□□ -1.1
CSNK1E-212ENST00000494610 FAM74A4Q5TZK3 123 aa8.18□□□□□ -1.1
CSNK1E-212ENST00000494610 SPATA12Q7Z6I5 190 aa8.18□□□□□ -1.1
CSNK1E-212ENST00000494610 ORMDL3Q8N138 153 aa8.18□□□□□ -1.1
CSNK1E-212ENST00000494610 C6orf223Q8N319 242 aa8.18□□□□□ -1.1
CSNK1E-212ENST00000494610 LINC00612Q8N6U2 182 aa8.18□□□□□ -1.1
CSNK1E-212ENST00000494610 C14orf178Q8N769 122 aaPredicted RBP8.18□□□□□ -1.1
CSNK1E-212ENST00000494610 ZNRF2Q8NHG8 242 aa8.18□□□□□ -1.1
CSNK1E-212ENST00000494610 MSRB1Q9NZV6 116 aa8.18□□□□□ -1.1
CSNK1E-212ENST00000494610 SRRM2Q9UQ35 2752 aaKnown RBP8.18□□□□□ -1.1
CSNK1E-212ENST00000494610 GAGE12BA1L429 117 aa8.17□□□□□ -1.1
CSNK1E-212ENST00000494610 PHOX2AO14813 284 aa8.17□□□□□ -1.1
CSNK1E-212ENST00000494610 GAGE7O76087 117 aa8.17□□□□□ -1.1
CSNK1E-212ENST00000494610 TRGC2P03986 189 aa8.17□□□□□ -1.1
CSNK1E-212ENST00000494610 GAGE12FP0CL80 117 aa8.17□□□□□ -1.1
CSNK1E-212ENST00000494610 GAGE12GP0CL81 117 aa8.17□□□□□ -1.1
CSNK1E-212ENST00000494610 GAGE12IP0CL82 117 aa8.17□□□□□ -1.1
CSNK1E-212ENST00000494610 DAD1P61803 113 aa8.17□□□□□ -1.1
CSNK1E-212ENST00000494610 SLAQ13239 276 aa8.17□□□□□ -1.1
CSNK1E-212ENST00000494610 CFAP126Q5VTH2 177 aa8.17□□□□□ -1.1
CSNK1E-212ENST00000494610 Q6ZTI0 123 aa8.17□□□□□ -1.1
CSNK1E-212ENST00000494610 AMN1Q8IY45 258 aa8.17□□□□□ -1.1
CSNK1E-212ENST00000494610 F5H697 171 aa8.16□□□□□ -1.1
CSNK1E-212ENST00000494610 NUDT3O95989 172 aa8.16□□□□□ -1.1
CSNK1E-212ENST00000494610 RAB4AP20338 218 aa8.16□□□□□ -1.1
CSNK1E-212ENST00000494610 CKS2P33552 79 aa8.16□□□□□ -1.1
CSNK1E-212ENST00000494610 KRTAP1-5Q9BYS1 174 aa8.16□□□□□ -1.1
CSNK1E-212ENST00000494610 A0A087WWL8 130 aa8.15□□□□□ -1.1
CSNK1E-212ENST00000494610 D6R8Y8 96 aa8.15□□□□□ -1.1
CSNK1E-212ENST00000494610 CRYGDP07320 174 aa8.15□□□□□ -1.1
CSNK1E-212ENST00000494610 DEFB130BP0DP73 79 aa8.15□□□□□ -1.1
CSNK1E-212ENST00000494610 DEFB130AP0DP74 79 aa8.15□□□□□ -1.1
CSNK1E-212ENST00000494610 MRPL51Q4U2R6 128 aaKnown RBP8.15□□□□□ -1.1
CSNK1E-212ENST00000494610 LINC00588Q9Y4M8 146 aa8.15□□□□□ -1.1
CSNK1E-212ENST00000494610 TRGV4A0A0C4DH28 118 aa8.14□□□□□ -1.11
CSNK1E-212ENST00000494610 ATP5G1P05496 136 aa8.14□□□□□ -1.11
CSNK1E-212ENST00000494610 SRIP30626 198 aa8.14□□□□□ -1.11
CSNK1E-212ENST00000494610 RNF185Q96GF1 192 aa8.14□□□□□ -1.11
CSNK1E-212ENST00000494610 PRELID3AQ96N28 172 aa8.14□□□□□ -1.11
CSNK1E-212ENST00000494610 KIF25-AS1Q9Y6Z4 181 aa8.14□□□□□ -1.11
CSNK1E-212ENST00000494610 TRBV10-1A0A0K0K1A3 114 aa8.13□□□□□ -1.11
CSNK1E-212ENST00000494610 F5H768 121 aa8.13□□□□□ -1.11
CSNK1E-212ENST00000494610 IGHV3-53P01767 116 aa8.13□□□□□ -1.11
CSNK1E-212ENST00000494610 RHOHQ15669 191 aa8.13□□□□□ -1.11
CSNK1E-212ENST00000494610 OR10J3Q5JRS4 329 aa8.13□□□□□ -1.11
CSNK1E-212ENST00000494610 SUMO4Q6EEV6 95 aa8.13□□□□□ -1.11
CSNK1E-212ENST00000494610 UFSP1Q6NVU6 142 aa8.13□□□□□ -1.11
CSNK1E-212ENST00000494610 MAP1LC3AQ9H492 121 aa8.13□□□□□ -1.11
CSNK1E-212ENST00000494610 JPT2Q9H910 190 aa8.13□□□□□ -1.11
CSNK1E-212ENST00000494610 TRBV6-4A0A1B0GX49 114 aa8.12□□□□□ -1.11
CSNK1E-212ENST00000494610 K7EQD1 137 aa8.12□□□□□ -1.11
CSNK1E-212ENST00000494610 TCAPO15273 167 aa8.12□□□□□ -1.11
CSNK1E-212ENST00000494610 KIAA1644Q3SXP7 199 aa8.12□□□□□ -1.11
CSNK1E-212ENST00000494610 DNAJC30Q96LL9 226 aa8.12□□□□□ -1.11
CSNK1E-212ENST00000494610 C20orf78Q9BR46 151 aa8.12□□□□□ -1.11
CSNK1E-212ENST00000494610 PRADC1Q9BSG0 188 aa8.12□□□□□ -1.11
CSNK1E-212ENST00000494610 ALKBH7Q9BT30 221 aaPredicted RBP8.12□□□□□ -1.11
CSNK1E-212ENST00000494610 SAMD10Q9BYL1 202 aa8.12□□□□□ -1.11
CSNK1E-212ENST00000494610 FLG2Q5D862 2391 aaPredicted RBP8.12□□□□□ -1.11
CSNK1E-212ENST00000494610 S100A6P06703 90 aa8.11□□□□□ -1.11
CSNK1E-212ENST00000494610 GATA1P15976 413 aaPredicted RBP8.11□□□□□ -1.11
CSNK1E-212ENST00000494610 PMCHP20382 165 aa8.11□□□□□ -1.11
CSNK1E-212ENST00000494610 LINC00315P59091 139 aa8.11□□□□□ -1.11
CSNK1E-212ENST00000494610 RPL32P62910 135 aaKnown RBP8.11□□□□□ -1.11
CSNK1E-212ENST00000494610 C15orf53Q8NAA6 179 aa8.11□□□□□ -1.11
CSNK1E-212ENST00000494610 ZNF479Q96JC4 524 aa8.11□□□□□ -1.11
CSNK1E-212ENST00000494610 NXT2Q9NPJ8 142 aaKnown RBP8.11□□□□□ -1.11
CSNK1E-212ENST00000494610 NIT2Q9NQR4 276 aa8.11□□□□□ -1.11
CSNK1E-212ENST00000494610 TRBV6-5A0A0K0K1A5 114 aa8.1□□□□□ -1.11
CSNK1E-212ENST00000494610 M0QY20 66 aa8.1□□□□□ -1.11
CSNK1E-212ENST00000494610 HIST1H2BKO60814 126 aa8.1□□□□□ -1.11
CSNK1E-212ENST00000494610 TNFRSF6BO95407 300 aa8.1□□□□□ -1.11
CSNK1E-212ENST00000494610 NCR2O95944 276 aa8.1□□□□□ -1.11
CSNK1E-212ENST00000494610 HIST1H2BJP06899 126 aa8.1□□□□□ -1.11
CSNK1E-212ENST00000494610 HIST1H2BOP23527 126 aa8.1□□□□□ -1.11
CSNK1E-212ENST00000494610 HIST1H2BBP33778 126 aa8.1□□□□□ -1.11
CSNK1E-212ENST00000494610 HIST1H2BDP58876 126 aa8.1□□□□□ -1.11
CSNK1E-212ENST00000494610 HIST1H2BCP62807 126 aa8.1□□□□□ -1.11
CSNK1E-212ENST00000494610 RPL36AP83881 106 aaKnown RBP8.1□□□□□ -1.11
CSNK1E-212ENST00000494610 Q0VG73 95 aa8.1□□□□□ -1.11
CSNK1E-212ENST00000494610 HIST2H2BEQ16778 126 aa8.1□□□□□ -1.11
CSNK1E-212ENST00000494610 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.1□□□□□ -1.11
CSNK1E-212ENST00000494610 HIST1H2BHQ93079 126 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 155.6 ms