RNA–Protein interactions for RNA: ENST00000492723.1

TOM1-216, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 2,568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-216ENST00000492723 TRPT1Q86TN4 253 aaKnown RBP12.21□□□□□ -0.45
TOM1-216ENST00000492723 FGF6P10767 208 aa12.21□□□□□ -0.46
TOM1-216ENST00000492723 TRBV27A0A0K0K1C4 114 aa12.2□□□□□ -0.46
TOM1-216ENST00000492723 IGHV3OR16-12A0A075B7B8 117 aa12.2□□□□□ -0.46
TOM1-216ENST00000492723 KRTAP10-3P60369 221 aa12.2□□□□□ -0.46
TOM1-216ENST00000492723 LINC00467Q9BRT7 94 aa12.2□□□□□ -0.46
TOM1-216ENST00000492723 CYSLTR1Q9Y271 337 aa12.2□□□□□ -0.46
TOM1-216ENST00000492723 JMJD1CQ15652 2540 aa12.19□□□□□ -0.46
TOM1-216ENST00000492723 IGLV1-51P01701 117 aa12.19□□□□□ -0.46
TOM1-216ENST00000492723 C2orf91Q6ZV80 131 aa12.19□□□□□ -0.46
TOM1-216ENST00000492723 ERASQ7Z444 233 aa12.19□□□□□ -0.46
TOM1-216ENST00000492723 C11orf72Q8NBR9 251 aa12.19□□□□□ -0.46
TOM1-216ENST00000492723 TP53TG1Q9Y2A0 90 aa12.19□□□□□ -0.46
TOM1-216ENST00000492723 TRAV12-1A0A0B4J245 112 aa12.19□□□□□ -0.46
TOM1-216ENST00000492723 ZC2HC1BQ5TFG8 222 aa12.19□□□□□ -0.46
TOM1-216ENST00000492723 BOD1L2Q8IYS8 172 aa12.19□□□□□ -0.46
TOM1-216ENST00000492723 H7C1H1 209 aa12.18□□□□□ -0.46
TOM1-216ENST00000492723 GTSCR1Q86UQ5 136 aa12.18□□□□□ -0.46
TOM1-216ENST00000492723 PCP2Q8IVA1 136 aa12.18□□□□□ -0.46
TOM1-216ENST00000492723 NEXN-AS1Q8NBZ9 246 aa12.18□□□□□ -0.46
TOM1-216ENST00000492723 BAALCQ8WXS3 180 aa12.18□□□□□ -0.46
TOM1-216ENST00000492723 NSD1Q96L73 2696 aaPredicted RBP12.18□□□□□ -0.46
TOM1-216ENST00000492723 A8MWV9 139 aa12.18□□□□□ -0.46
TOM1-216ENST00000492723 PLNP26678 52 aa12.18□□□□□ -0.46
TOM1-216ENST00000492723 IGKV2D-26A0A0A0MRZ7 120 aa12.17□□□□□ -0.46
TOM1-216ENST00000492723 RPL39P62891 51 aaKnown RBP12.17□□□□□ -0.46
TOM1-216ENST00000492723 CHTOPQ9Y3Y2 248 aaKnown RBP12.17□□□□□ -0.46
TOM1-216ENST00000492723 F8VRH5 84 aa12.17□□□□□ -0.46
TOM1-216ENST00000492723 AZU1P20160 251 aa12.17□□□□□ -0.46
TOM1-216ENST00000492723 CMC4P56277 68 aaPredicted RBP12.17□□□□□ -0.46
TOM1-216ENST00000492723 NDUFA11Q86Y39 141 aa12.17□□□□□ -0.46
TOM1-216ENST00000492723 C1orf158Q8N1D5 194 aa12.17□□□□□ -0.46
TOM1-216ENST00000492723 WFDC10AQ9H1F0 79 aa12.17□□□□□ -0.46
TOM1-216ENST00000492723 MRPL16Q9NX20 251 aaKnown RBP12.17□□□□□ -0.46
TOM1-216ENST00000492723 C12orf54Q6X4T0 127 aa12.16□□□□□ -0.46
TOM1-216ENST00000492723 PIK3CD-AS1Q5SR53 167 aa12.16□□□□□ -0.46
TOM1-216ENST00000492723 SPXQ9BT56 116 aa12.16□□□□□ -0.46
TOM1-216ENST00000492723 PF4P02776 101 aa12.15□□□□□ -0.46
TOM1-216ENST00000492723 P0DMU3 169 aa12.15□□□□□ -0.46
TOM1-216ENST00000492723 FAM231AP0DMU4 169 aa12.15□□□□□ -0.46
TOM1-216ENST00000492723 FAM231CP0DMU5 169 aa12.15□□□□□ -0.46
TOM1-216ENST00000492723 BVES-AS1Q5T3Y7 98 aa12.15□□□□□ -0.46
TOM1-216ENST00000492723 CFAP126Q5VTH2 177 aa12.15□□□□□ -0.46
TOM1-216ENST00000492723 PTH2Q96A98 100 aa12.15□□□□□ -0.46
TOM1-216ENST00000492723 RIPPLY3P57055 190 aa12.15□□□□□ -0.47
TOM1-216ENST00000492723 UFSP1Q6NVU6 142 aa12.15□□□□□ -0.47
TOM1-216ENST00000492723 HIVEP1P15822 2718 aa12.14□□□□□ -0.47
TOM1-216ENST00000492723 PRSS29PA6NIE9 313 aa12.14□□□□□ -0.47
TOM1-216ENST00000492723 LINC01549A6NIU2 74 aa12.14□□□□□ -0.47
TOM1-216ENST00000492723 BEAN1Q3B7T3 259 aa12.14□□□□□ -0.47
TOM1-216ENST00000492723 C2CD3Q4AC94 2353 aa12.14□□□□□ -0.47
TOM1-216ENST00000492723 IGIPA6NJ69 53 aa12.14□□□□□ -0.47
TOM1-216ENST00000492723 I3L3M4 83 aa12.14□□□□□ -0.47
TOM1-216ENST00000492723 TSHBP01222 138 aa12.14□□□□□ -0.47
TOM1-216ENST00000492723 TTTY13Q9BZ97 58 aa12.14□□□□□ -0.47
TOM1-216ENST00000492723 EDA2RQ9HAV5 297 aa12.13□□□□□ -0.47
TOM1-216ENST00000492723 Q6ZSN1 163 aa12.13□□□□□ -0.47
TOM1-216ENST00000492723 FN1P02751 2386 aaKnown RBP12.12□□□□□ -0.47
TOM1-216ENST00000492723 RPL35AP18077 110 aaKnown RBP12.12□□□□□ -0.47
TOM1-216ENST00000492723 RHOHQ15669 191 aa12.12□□□□□ -0.47
TOM1-216ENST00000492723 C19orf73Q9NVV2 129 aa12.12□□□□□ -0.47
TOM1-216ENST00000492723 NOTCH3Q9UM47 2321 aa12.12□□□□□ -0.47
TOM1-216ENST00000492723 NACAE9PAV3 2078 aa12.12□□□□□ -0.47
TOM1-216ENST00000492723 ORAOV1Q8WV07 137 aa12.12□□□□□ -0.47
TOM1-216ENST00000492723 TMEM141Q96I45 108 aa12.12□□□□□ -0.47
TOM1-216ENST00000492723 FAM110AQ9BQ89 295 aa12.12□□□□□ -0.47
TOM1-216ENST00000492723 TNFRSF18Q9Y5U5 241 aa12.12□□□□□ -0.47
TOM1-216ENST00000492723 TIMM17AQ99595 171 aa12.11□□□□□ -0.47
TOM1-216ENST00000492723 RHODO00212 210 aa12.11□□□□□ -0.47
TOM1-216ENST00000492723 SIVA1O15304 175 aa12.11□□□□□ -0.47
TOM1-216ENST00000492723 Q6ZVH6 145 aa12.11□□□□□ -0.47
TOM1-216ENST00000492723 Q9UF83 564 aa12.11□□□□□ -0.47
TOM1-216ENST00000492723 GIG44P09565 113 aaPredicted RBP12.1□□□□□ -0.47
TOM1-216ENST00000492723 TMEM97Q5BJF2 176 aa12.1□□□□□ -0.47
TOM1-216ENST00000492723 LINC00482Q8N8I6 264 aa12.1□□□□□ -0.47
TOM1-216ENST00000492723 TRGV1A0A0A0MS02 117 aa12.1□□□□□ -0.47
TOM1-216ENST00000492723 PMVKQ15126 192 aa12.1□□□□□ -0.47
TOM1-216ENST00000492723 RNASE8Q8TDE3 154 aaKnown RBP12.1□□□□□ -0.47
TOM1-216ENST00000492723 TRAV8-6A0A0B4J262 113 aa12.09□□□□□ -0.47
TOM1-216ENST00000492723 RS1O15537 224 aa12.09□□□□□ -0.47
TOM1-216ENST00000492723 C20orf203Q8NBC4 194 aa12.09□□□□□ -0.47
TOM1-216ENST00000492723 EMP1P54849 157 aa12.08□□□□□ -0.48
TOM1-216ENST00000492723 IL17DQ8TAD2 202 aa12.08□□□□□ -0.48
TOM1-216ENST00000492723 TMEM263Q8WUH6 116 aaKnown RBP12.08□□□□□ -0.48
TOM1-216ENST00000492723 CST9LQ9H4G1 147 aa12.08□□□□□ -0.48
TOM1-216ENST00000492723 IGHV3-53P01767 116 aa12.08□□□□□ -0.48
TOM1-216ENST00000492723 OPRPNQ99935 248 aaPredicted RBP12.07□□□□□ -0.48
TOM1-216ENST00000492723 COX11Q9Y6N1 276 aa12.07□□□□□ -0.48
TOM1-216ENST00000492723 HSD52Q0P140 79 aa12.07□□□□□ -0.48
TOM1-216ENST00000492723 MAPKAPK5-AS1Q8N8E1 139 aa12.06□□□□□ -0.48
TOM1-216ENST00000492723 OR4C5Q8NGB2 326 aa12.06□□□□□ -0.48
TOM1-216ENST00000492723 IGLV4-69A0A075B6H9 119 aa12.06□□□□□ -0.48
TOM1-216ENST00000492723 PTTG1IPP53801 180 aa12.06□□□□□ -0.48
TOM1-216ENST00000492723 Q6ZTI0 123 aa12.06□□□□□ -0.48
TOM1-216ENST00000492723 C1QTNF4Q9BXJ3 329 aa12.06□□□□□ -0.48
TOM1-216ENST00000492723 TRBV25-1A0A075B6N4 114 aa12.05□□□□□ -0.48
TOM1-216ENST00000492723 C11orf86A6NJI1 115 aa12.05□□□□□ -0.48
TOM1-216ENST00000492723 CCL25O15444 150 aa12.05□□□□□ -0.48
TOM1-216ENST00000492723 CRLF1O75462 422 aa12.05□□□□□ -0.48
TOM1-216ENST00000492723 VWFP04275 2813 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 189.1 ms