RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 OR11H2Q8NH07 326 aa9.16□□□□□ -0.94
HMGN1-220ENST00000492280 IGHV3-64A0A075B6Q5 118 aa9.15□□□□□ -0.94
HMGN1-220ENST00000492280 GAGE12BA1L429 117 aa9.15□□□□□ -0.94
HMGN1-220ENST00000492280 H3BRM9 83 aa9.15□□□□□ -0.94
HMGN1-220ENST00000492280 SIVA1O15304 175 aa9.15□□□□□ -0.94
HMGN1-220ENST00000492280 RNASE13Q5GAN3 156 aaKnown RBP9.15□□□□□ -0.94
HMGN1-220ENST00000492280 OTOGQ6ZRI0 2925 aa9.15□□□□□ -0.94
HMGN1-220ENST00000492280 LINC01619G3V211 115 aa9.15□□□□□ -0.95
HMGN1-220ENST00000492280 M0QY20 66 aa9.15□□□□□ -0.95
HMGN1-220ENST00000492280 FOXI2Q6ZQN5 318 aa9.15□□□□□ -0.95
HMGN1-220ENST00000492280 MTURNQ8N3F0 131 aa9.15□□□□□ -0.95
HMGN1-220ENST00000492280 HIST1H4GQ99525 98 aa9.15□□□□□ -0.95
HMGN1-220ENST00000492280 KIR2DL4Q99706 377 aa9.15□□□□□ -0.95
HMGN1-220ENST00000492280 IGLV4-69A0A075B6H9 119 aa9.14□□□□□ -0.95
HMGN1-220ENST00000492280 IGHV3OR16-12A0A075B7B8 117 aa9.14□□□□□ -0.95
HMGN1-220ENST00000492280 LGALS9O00182 355 aa9.14□□□□□ -0.95
HMGN1-220ENST00000492280 SFTA2Q6UW10 78 aa9.14□□□□□ -0.95
HMGN1-220ENST00000492280 ESM1Q9NQ30 184 aa9.14□□□□□ -0.95
HMGN1-220ENST00000492280 TRAV12-1A0A0B4J245 112 aa9.14□□□□□ -0.95
HMGN1-220ENST00000492280 SAP30O75446 220 aa9.14□□□□□ -0.95
HMGN1-220ENST00000492280 CEMP1Q6PRD7 247 aaPredicted RBP9.14□□□□□ -0.95
HMGN1-220ENST00000492280 Q6ZSV7 163 aa9.14□□□□□ -0.95
HMGN1-220ENST00000492280 CEND1Q8N111 149 aa9.14□□□□□ -0.95
HMGN1-220ENST00000492280 DYNLRB2Q8TF09 96 aa9.14□□□□□ -0.95
HMGN1-220ENST00000492280 CST9LQ9H4G1 147 aa9.14□□□□□ -0.95
HMGN1-220ENST00000492280 TMEM89A2RUT3 159 aa9.13□□□□□ -0.95
HMGN1-220ENST00000492280 RBX1P62877 108 aa9.13□□□□□ -0.95
HMGN1-220ENST00000492280 IGIPA6NJ69 53 aa9.13□□□□□ -0.95
HMGN1-220ENST00000492280 TSPEAR-AS2P59090 65 aa9.13□□□□□ -0.95
HMGN1-220ENST00000492280 POM121L12Q8N7R1 296 aa9.13□□□□□ -0.95
HMGN1-220ENST00000492280 SPAG8Q99932 426 aaPredicted RBP9.13□□□□□ -0.95
HMGN1-220ENST00000492280 SPCS1Q9Y6A9 102 aa9.13□□□□□ -0.95
HMGN1-220ENST00000492280 DNAJC9-AS1A6NH13 148 aa9.12□□□□□ -0.95
HMGN1-220ENST00000492280 ZNF815PA8K554 130 aa9.12□□□□□ -0.95
HMGN1-220ENST00000492280 H3BMM0 161 aa9.12□□□□□ -0.95
HMGN1-220ENST00000492280 FOSL1P15407 271 aa9.12□□□□□ -0.95
HMGN1-220ENST00000492280 TMEM170BQ5T4T1 132 aa9.12□□□□□ -0.95
HMGN1-220ENST00000492280 Q6ZSN1 163 aa9.12□□□□□ -0.95
HMGN1-220ENST00000492280 ZNRF2Q8NHG8 242 aa9.12□□□□□ -0.95
HMGN1-220ENST00000492280 MAP6D1Q9H9H5 199 aa9.12□□□□□ -0.95
HMGN1-220ENST00000492280 A0A1W2PPM0 123 aa9.12□□□□□ -0.95
HMGN1-220ENST00000492280 VCYO14598 125 aa9.12□□□□□ -0.95
HMGN1-220ENST00000492280 SMIM13P0DJ93 91 aa9.12□□□□□ -0.95
HMGN1-220ENST00000492280 SCGB2A2Q13296 93 aa9.12□□□□□ -0.95
HMGN1-220ENST00000492280 SYT8Q8NBV8 401 aa9.12□□□□□ -0.95
HMGN1-220ENST00000492280 HIGD1BQ9P298 99 aa9.12□□□□□ -0.95
HMGN1-220ENST00000492280 IGHV3-38A0A0C4DH36 116 aa9.11□□□□□ -0.95
HMGN1-220ENST00000492280 SAMD13Q5VXD3 122 aa9.11□□□□□ -0.95
HMGN1-220ENST00000492280 MRPL16Q9NX20 251 aaKnown RBP9.11□□□□□ -0.95
HMGN1-220ENST00000492280 XCL2Q9UBD3 114 aa9.11□□□□□ -0.95
HMGN1-220ENST00000492280 MYMXA0A1B0GTQ4 84 aa9.11□□□□□ -0.95
HMGN1-220ENST00000492280 SAMD5Q5TGI4 173 aa9.11□□□□□ -0.95
HMGN1-220ENST00000492280 UFSP1Q6NVU6 142 aa9.11□□□□□ -0.95
HMGN1-220ENST00000492280 SCGB1D4Q6XE38 83 aa9.11□□□□□ -0.95
HMGN1-220ENST00000492280 LRRC75A-AS1Q8N1F1 130 aa9.11□□□□□ -0.95
HMGN1-220ENST00000492280 RNF152Q8N8N0 203 aa9.11□□□□□ -0.95
HMGN1-220ENST00000492280 PHLDA1Q8WV24 401 aaPredicted RBP9.11□□□□□ -0.95
HMGN1-220ENST00000492280 TENM1Q9UKZ4 2725 aa9.11□□□□□ -0.95
HMGN1-220ENST00000492280 K7EP34 96 aa9.11□□□□□ -0.95
HMGN1-220ENST00000492280 ODF3Q96PU9 254 aa9.11□□□□□ -0.95
HMGN1-220ENST00000492280 TRBV27A0A0K0K1C4 114 aa9.1□□□□□ -0.95
HMGN1-220ENST00000492280 CD28P10747 220 aa9.1□□□□□ -0.95
HMGN1-220ENST00000492280 RAX2Q96IS3 184 aa9.1□□□□□ -0.95
HMGN1-220ENST00000492280 WFDC10AQ9H1F0 79 aa9.1□□□□□ -0.95
HMGN1-220ENST00000492280 PPP1R17O96001 155 aa9.1□□□□□ -0.95
HMGN1-220ENST00000492280 C4orf3Q8WVX3 66 aa9.1□□□□□ -0.95
HMGN1-220ENST00000492280 PMVKQ15126 192 aa9.09□□□□□ -0.95
HMGN1-220ENST00000492280 OCIAD2Q56VL3 154 aa9.09□□□□□ -0.95
HMGN1-220ENST00000492280 LINC01587Q99440 93 aa9.09□□□□□ -0.95
HMGN1-220ENST00000492280 TRBV7-3A0A075B6L6 115 aa9.09□□□□□ -0.95
HMGN1-220ENST00000492280 E9PLD3 99 aa9.09□□□□□ -0.95
HMGN1-220ENST00000492280 AZU1P20160 251 aa9.09□□□□□ -0.95
HMGN1-220ENST00000492280 TRGV11A0A075B6L2 103 aa9.08□□□□□ -0.96
HMGN1-220ENST00000492280 DEFB114Q30KQ6 69 aa9.08□□□□□ -0.96
HMGN1-220ENST00000492280 ODF3L2Q3SX64 289 aa9.08□□□□□ -0.96
HMGN1-220ENST00000492280 TM2D2Q9BX73 214 aa9.08□□□□□ -0.96
HMGN1-220ENST00000492280 FABP2P12104 132 aa9.08□□□□□ -0.96
HMGN1-220ENST00000492280 C12orf74Q32Q52 190 aa9.08□□□□□ -0.96
HMGN1-220ENST00000492280 TRPT1Q86TN4 253 aaKnown RBP9.08□□□□□ -0.96
HMGN1-220ENST00000492280 Q8N2B8 174 aa9.08□□□□□ -0.96
HMGN1-220ENST00000492280 PEMTQ9UBM1 199 aa9.08□□□□□ -0.96
HMGN1-220ENST00000492280 GTF2H5Q6ZYL4 71 aa9.07□□□□□ -0.96
HMGN1-220ENST00000492280 CITED2Q99967 270 aaPredicted RBP9.07□□□□□ -0.96
HMGN1-220ENST00000492280 A0A0J9YXV3 536 aa9.07□□□□□ -0.96
HMGN1-220ENST00000492280 ADARB2-AS1A8MUL3 147 aa9.07□□□□□ -0.96
HMGN1-220ENST00000492280 SMR3AQ99954 134 aa9.07□□□□□ -0.96
HMGN1-220ENST00000492280 TRRAPQ9Y4A5 3859 aa9.06□□□□□ -0.96
HMGN1-220ENST00000492280 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.06□□□□□ -0.96
HMGN1-220ENST00000492280 TRBV6-5A0A0K0K1A5 114 aa9.06□□□□□ -0.96
HMGN1-220ENST00000492280 IGKV2-29A2NJV5 120 aaPredicted RBP9.06□□□□□ -0.96
HMGN1-220ENST00000492280 RIPPLY3P57055 190 aa9.06□□□□□ -0.96
HMGN1-220ENST00000492280 ATRQ13535 2644 aa9.06□□□□□ -0.96
HMGN1-220ENST00000492280 IGLL5B9A064 214 aa9.06□□□□□ -0.96
HMGN1-220ENST00000492280 IGHV3-53P01767 116 aa9.06□□□□□ -0.96
HMGN1-220ENST00000492280 SRSF9Q13242 221 aaKnown RBP eCLIP9.06□□□□□ -0.96
HMGN1-220ENST00000492280 C20orf203Q8NBC4 194 aa9.06□□□□□ -0.96
HMGN1-220ENST00000492280 ZNF479Q96JC4 524 aa9.06□□□□□ -0.96
HMGN1-220ENST00000492280 APOMO95445 188 aa9.05□□□□□ -0.96
HMGN1-220ENST00000492280 TIMM17AQ99595 171 aa9.05□□□□□ -0.96
HMGN1-220ENST00000492280 VPS25Q9BRG1 176 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms