RNA–Protein interactions for RNA: ENST00000491761.1

SNED1-211, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best)

Gene SNED1, Length 4,125 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-211ENST00000491761 AKAP13Q12802 2813 aa8.25□□□□□ -1.09
SNED1-211ENST00000491761 IGLL5B9A064 214 aa8.25□□□□□ -1.09
SNED1-211ENST00000491761 J3QQQ9 107 aa8.25□□□□□ -1.09
SNED1-211ENST00000491761 ZNF415Q09FC8 603 aa8.25□□□□□ -1.09
SNED1-211ENST00000491761 C9orf153Q5TBE3 101 aa8.25□□□□□ -1.09
SNED1-211ENST00000491761 TEP1Q99973 2627 aaKnown RBP8.25□□□□□ -1.09
SNED1-211ENST00000491761 RBMY1BA6NDE4 496 aaKnown RBP8.25□□□□□ -1.09
SNED1-211ENST00000491761 RBMY1EA6NEQ0 496 aaKnown RBP8.25□□□□□ -1.09
SNED1-211ENST00000491761 CRPP02741 224 aa8.25□□□□□ -1.09
SNED1-211ENST00000491761 RBMY1DP0C7P1 496 aaKnown RBP8.25□□□□□ -1.09
SNED1-211ENST00000491761 RBMY1A1P0DJD3 496 aaKnown RBP8.25□□□□□ -1.09
SNED1-211ENST00000491761 RBMY1CP0DJD4 496 aa8.25□□□□□ -1.09
SNED1-211ENST00000491761 LMO4P61968 165 aa8.25□□□□□ -1.09
SNED1-211ENST00000491761 SVIPQ8NHG7 77 aa8.25□□□□□ -1.09
SNED1-211ENST00000491761 ZFAND3Q9H8U3 227 aa8.25□□□□□ -1.09
SNED1-211ENST00000491761 IGHV4-30-2A0A087WSY4 118 aa8.24□□□□□ -1.09
SNED1-211ENST00000491761 G3V4G9 280 aa8.24□□□□□ -1.09
SNED1-211ENST00000491761 C6orf226Q5I0X4 101 aa8.24□□□□□ -1.09
SNED1-211ENST00000491761 MRPL53Q96EL3 112 aaKnown RBP8.24□□□□□ -1.09
SNED1-211ENST00000491761 CCDC140Q96MF4 163 aa8.24□□□□□ -1.09
SNED1-211ENST00000491761 NDUFA12Q9UI09 145 aa8.24□□□□□ -1.09
SNED1-211ENST00000491761 HELZ2Q9BYK8 2649 aaKnown RBP8.24□□□□□ -1.09
SNED1-211ENST00000491761 H3BMM0 161 aa8.24□□□□□ -1.09
SNED1-211ENST00000491761 NXPH4O95158 308 aa8.24□□□□□ -1.09
SNED1-211ENST00000491761 DEFB130BP0DP73 79 aa8.24□□□□□ -1.09
SNED1-211ENST00000491761 DEFB130AP0DP74 79 aa8.24□□□□□ -1.09
SNED1-211ENST00000491761 COX8CQ7Z4L0 72 aa8.24□□□□□ -1.09
SNED1-211ENST00000491761 UBE2WQ96B02 151 aa8.24□□□□□ -1.09
SNED1-211ENST00000491761 C5orf56Q8N8D9 126 aa8.24□□□□□ -1.09
SNED1-211ENST00000491761 LINC01548A6NM66 108 aa8.23□□□□□ -1.09
SNED1-211ENST00000491761 JPT2Q9H910 190 aa8.23□□□□□ -1.09
SNED1-211ENST00000491761 TRAV12-1A0A0B4J245 112 aa8.23□□□□□ -1.09
SNED1-211ENST00000491761 IGHV4-61A0A0C4DH41 118 aa8.23□□□□□ -1.09
SNED1-211ENST00000491761 GAGE12JA6NER3 117 aa8.23□□□□□ -1.09
SNED1-211ENST00000491761 GAGE4Q13068 117 aa8.23□□□□□ -1.09
SNED1-211ENST00000491761 GAGE5Q13069 117 aa8.23□□□□□ -1.09
SNED1-211ENST00000491761 C15orf53Q8NAA6 179 aa8.23□□□□□ -1.09
SNED1-211ENST00000491761 LAMTOR3Q9UHA4 124 aa8.23□□□□□ -1.09
SNED1-211ENST00000491761 ZFHX3Q15911 3703 aa8.23□□□□□ -1.09
SNED1-211ENST00000491761 RPL39P62891 51 aaKnown RBP8.22□□□□□ -1.09
SNED1-211ENST00000491761 GAGE6Q13070 117 aa8.22□□□□□ -1.09
SNED1-211ENST00000491761 DAND5Q8N907 189 aa8.22□□□□□ -1.09
SNED1-211ENST00000491761 A0A1W2PPR1 153 aa8.22□□□□□ -1.09
SNED1-211ENST00000491761 S100A7L2Q5SY68 101 aa8.22□□□□□ -1.09
SNED1-211ENST00000491761 C20orf78Q9BR46 151 aa8.22□□□□□ -1.09
SNED1-211ENST00000491761 TCTEX1D4Q5JR98 221 aa8.22□□□□□ -1.09
SNED1-211ENST00000491761 MRAPQ8TCY5 172 aa8.22□□□□□ -1.09
SNED1-211ENST00000491761 TINCRA0A1B0GVN0 87 aa8.22□□□□□ -1.09
SNED1-211ENST00000491761 C19orf84I3L1E1 186 aa8.22□□□□□ -1.09
SNED1-211ENST00000491761 FOXI2Q6ZQN5 318 aa8.21□□□□□ -1.09
SNED1-211ENST00000491761 CARD19Q96LW7 228 aa8.21□□□□□ -1.09
SNED1-211ENST00000491761 C1QTNF4Q9BXJ3 329 aa8.21□□□□□ -1.09
SNED1-211ENST00000491761 INSP01308 110 aa8.21□□□□□ -1.1
SNED1-211ENST00000491761 TMEM86BQ8N661 226 aa8.21□□□□□ -1.1
SNED1-211ENST00000491761 CITED2Q99967 270 aaPredicted RBP8.21□□□□□ -1.1
SNED1-211ENST00000491761 A0A0J9YXV3 536 aa8.21□□□□□ -1.1
SNED1-211ENST00000491761 GAGE7O76087 117 aa8.21□□□□□ -1.1
SNED1-211ENST00000491761 GAGE12FP0CL80 117 aa8.21□□□□□ -1.1
SNED1-211ENST00000491761 GAGE12GP0CL81 117 aa8.21□□□□□ -1.1
SNED1-211ENST00000491761 GAGE12IP0CL82 117 aa8.21□□□□□ -1.1
SNED1-211ENST00000491761 NDUFA4O00483 81 aa8.2□□□□□ -1.1
SNED1-211ENST00000491761 C9orf47Q6ZRZ4 202 aa8.2□□□□□ -1.1
SNED1-211ENST00000491761 ZNRF2Q8NHG8 242 aa8.2□□□□□ -1.1
SNED1-211ENST00000491761 A4D1N5 150 aa8.2□□□□□ -1.1
SNED1-211ENST00000491761 IGHG4P01861 327 aa8.2□□□□□ -1.1
SNED1-211ENST00000491761 HOXD3P31249 432 aaPredicted RBP8.2□□□□□ -1.1
SNED1-211ENST00000491761 RNF185Q96GF1 192 aa8.2□□□□□ -1.1
SNED1-211ENST00000491761 LENEPQ9Y5L5 61 aa8.2□□□□□ -1.1
SNED1-211ENST00000491761 CLPSL1A2RUU4 121 aa8.19□□□□□ -1.1
SNED1-211ENST00000491761 IFITM1P13164 125 aa8.19□□□□□ -1.1
SNED1-211ENST00000491761 SIVA1O15304 175 aa8.19□□□□□ -1.1
SNED1-211ENST00000491761 HERV-K104P63124 156 aa8.19□□□□□ -1.1
SNED1-211ENST00000491761 TRPT1Q86TN4 253 aaKnown RBP8.19□□□□□ -1.1
SNED1-211ENST00000491761 CNFNQ9BYD5 112 aa8.19□□□□□ -1.1
SNED1-211ENST00000491761 ATMQ13315 3056 aa8.19□□□□□ -1.1
SNED1-211ENST00000491761 IGHV1OR15-1A0A075B7D0 117 aa8.19□□□□□ -1.1
SNED1-211ENST00000491761 A0A096LNJ9 63 aa8.19□□□□□ -1.1
SNED1-211ENST00000491761 A0A096LPF7 62 aa8.19□□□□□ -1.1
SNED1-211ENST00000491761 WFDC11Q8NEX6 87 aa8.19□□□□□ -1.1
SNED1-211ENST00000491761 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.18□□□□□ -1.1
SNED1-211ENST00000491761 IGKV2-29A2NJV5 120 aaPredicted RBP8.18□□□□□ -1.1
SNED1-211ENST00000491761 CFC1BP0CG36 223 aa8.18□□□□□ -1.1
SNED1-211ENST00000491761 CFC1P0CG37 223 aa8.18□□□□□ -1.1
SNED1-211ENST00000491761 RASL10AQ92737 203 aa8.18□□□□□ -1.1
SNED1-211ENST00000491761 OPRPNQ99935 248 aaPredicted RBP8.18□□□□□ -1.1
SNED1-211ENST00000491761 LGALS1P09382 135 aaKnown RBP8.18□□□□□ -1.1
SNED1-211ENST00000491761 BLCAPP62952 87 aa8.18□□□□□ -1.1
SNED1-211ENST00000491761 CLPSL2Q6UWE3 100 aa8.18□□□□□ -1.1
SNED1-211ENST00000491761 LEPROTO15243 131 aa8.18□□□□□ -1.1
SNED1-211ENST00000491761 CFAP46Q8IYW2 2715 aa8.17□□□□□ -1.1
SNED1-211ENST00000491761 H3BUA1 57 aa8.17□□□□□ -1.1
SNED1-211ENST00000491761 IGKV2D-26A0A0A0MRZ7 120 aa8.17□□□□□ -1.1
SNED1-211ENST00000491761 IGHV4-59P01825 116 aa8.17□□□□□ -1.1
SNED1-211ENST00000491761 ODF1Q14990 250 aa8.17□□□□□ -1.1
SNED1-211ENST00000491761 C2orf91Q6ZV80 131 aa8.17□□□□□ -1.1
SNED1-211ENST00000491761 ITPR3Q14573 2671 aa8.16□□□□□ -1.1
SNED1-211ENST00000491761 GATA3P23771 443 aa8.16□□□□□ -1.1
SNED1-211ENST00000491761 HAMPP81172 84 aa8.16□□□□□ -1.1
SNED1-211ENST00000491761 C11orf21Q9P2W6 132 aa8.16□□□□□ -1.1
SNED1-211ENST00000491761 I3L3M4 83 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms