RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 IFITM1P13164 125 aa3.38□□□□□ -1.87
RTN4-215ENST00000491592 CD24P25063 80 aa3.38□□□□□ -1.87
RTN4-215ENST00000491592 CKS2P33552 79 aa3.38□□□□□ -1.87
RTN4-215ENST00000491592 ATP5G2Q06055 141 aa3.38□□□□□ -1.87
RTN4-215ENST00000491592 PDE6HQ13956 83 aa3.38□□□□□ -1.87
RTN4-215ENST00000491592 ETDBQ3ZM63 59 aa3.38□□□□□ -1.87
RTN4-215ENST00000491592 MRPL51Q4U2R6 128 aaKnown RBP3.38□□□□□ -1.87
RTN4-215ENST00000491592 SPINK14Q6IE38 97 aa3.38□□□□□ -1.87
RTN4-215ENST00000491592 LINC00311Q8N616 119 aa3.38□□□□□ -1.87
RTN4-215ENST00000491592 TMEM158Q8WZ71 300 aa3.38□□□□□ -1.87
RTN4-215ENST00000491592 ZC2HC1AQ96GY0 325 aa3.38□□□□□ -1.87
RTN4-215ENST00000491592 C18orf15Q96N68 181 aa3.38□□□□□ -1.87
RTN4-215ENST00000491592 CAMK2N2Q96S95 79 aa3.38□□□□□ -1.87
RTN4-215ENST00000491592 NAA38Q9BRA0 125 aaKnown RBP3.38□□□□□ -1.87
RTN4-215ENST00000491592 NHP2Q9NX24 153 aaKnown RBP3.38□□□□□ -1.87
RTN4-215ENST00000491592 PRO0461Q9UI25 63 aa3.38□□□□□ -1.87
RTN4-215ENST00000491592 HHLA3Q9XRX5 114 aa3.38□□□□□ -1.87
RTN4-215ENST00000491592 LINC00312Q9Y6C7 94 aa3.38□□□□□ -1.87
RTN4-215ENST00000491592 TRBV20-1A0A075B6N2 111 aa3.37□□□□□ -1.87
RTN4-215ENST00000491592 A0A0J9YWU9 116 aa3.37□□□□□ -1.87
RTN4-215ENST00000491592 IGHV3-64DA0A0J9YX35 117 aa3.37□□□□□ -1.87
RTN4-215ENST00000491592 FAM236AA0A1B0GUQ0 79 aa3.37□□□□□ -1.87
RTN4-215ENST00000491592 FAM236BA0A1B0GV22 79 aa3.37□□□□□ -1.87
RTN4-215ENST00000491592 IGHV3-13P01766 116 aa3.37□□□□□ -1.87
RTN4-215ENST00000491592 IGKV1-16P04430 117 aa3.37□□□□□ -1.87
RTN4-215ENST00000491592 PRM2P04554 102 aa3.37□□□□□ -1.87
RTN4-215ENST00000491592 CCL4P13236 92 aa3.37□□□□□ -1.87
RTN4-215ENST00000491592 PLNP26678 52 aa3.37□□□□□ -1.87
RTN4-215ENST00000491592 UBE2BP63146 152 aa3.37□□□□□ -1.87
RTN4-215ENST00000491592 WT1-ASQ06250 92 aa3.37□□□□□ -1.87
RTN4-215ENST00000491592 LYZL1Q6UWQ5 148 aa3.37□□□□□ -1.87
RTN4-215ENST00000491592 GTSCR1Q86UQ5 136 aa3.37□□□□□ -1.87
RTN4-215ENST00000491592 GPHB5Q86YW7 130 aa3.37□□□□□ -1.87
RTN4-215ENST00000491592 Q8N8P6 123 aa3.37□□□□□ -1.87
RTN4-215ENST00000491592 MYOZ3Q8TDC0 251 aa3.37□□□□□ -1.87
RTN4-215ENST00000491592 PPDPFLQ8WWR9 84 aa3.37□□□□□ -1.87
RTN4-215ENST00000491592 DPH3Q96FX2 82 aa3.37□□□□□ -1.87
RTN4-215ENST00000491592 SHANK2-AS3Q9BTD1 123 aa3.37□□□□□ -1.87
RTN4-215ENST00000491592 DSCAMO60469 2012 aa3.37□□□□□ -1.87
RTN4-215ENST00000491592 AGRNO00468 2067 aa3.36□□□□□ -1.87
RTN4-215ENST00000491592 TRBV7-3A0A075B6L6 115 aa3.36□□□□□ -1.87
RTN4-215ENST00000491592 IGHV3OR15-7A0A075B7D8 119 aa3.36□□□□□ -1.87
RTN4-215ENST00000491592 TRAV12-1A0A0B4J245 112 aa3.36□□□□□ -1.87
RTN4-215ENST00000491592 IGHV3-35A0A0C4DH35 117 aa3.36□□□□□ -1.87
RTN4-215ENST00000491592 TRBV27A0A0K0K1C4 114 aa3.36□□□□□ -1.87
RTN4-215ENST00000491592 KRTAP16-1A8MUX0 517 aa3.36□□□□□ -1.87
RTN4-215ENST00000491592 H7C423 109 aa3.36□□□□□ -1.87
RTN4-215ENST00000491592 K7EMI3 77 aa3.36□□□□□ -1.87
RTN4-215ENST00000491592 NPYP01303 97 aa3.36□□□□□ -1.87
RTN4-215ENST00000491592 IGLV2-23P01705 113 aa3.36□□□□□ -1.87
RTN4-215ENST00000491592 TFF1P04155 84 aa3.36□□□□□ -1.87
RTN4-215ENST00000491592 IL4P05112 153 aa3.36□□□□□ -1.87
RTN4-215ENST00000491592 COL8A2P25067 703 aa3.36□□□□□ -1.87
RTN4-215ENST00000491592 RPL27AP46776 148 aaKnown RBP3.36□□□□□ -1.87
RTN4-215ENST00000491592 ZNF80P51504 273 aaPredicted RBP3.36□□□□□ -1.87
RTN4-215ENST00000491592 CXCL6P80162 114 aa3.36□□□□□ -1.87
RTN4-215ENST00000491592 PHF5AQ7RTV0 110 aaKnown RBP3.36□□□□□ -1.87
RTN4-215ENST00000491592 SH2D6Q7Z4S9 175 aa3.36□□□□□ -1.87
RTN4-215ENST00000491592 CAMK2N1Q7Z7J9 78 aa3.36□□□□□ -1.87
RTN4-215ENST00000491592 AMN1Q8IY45 258 aa3.36□□□□□ -1.87
RTN4-215ENST00000491592 RNF182Q8N6D2 247 aa3.36□□□□□ -1.87
RTN4-215ENST00000491592 LEAP2Q969E1 77 aa3.36□□□□□ -1.87
RTN4-215ENST00000491592 RNF5Q99942 180 aa3.36□□□□□ -1.87
RTN4-215ENST00000491592 CNFNQ9BYD5 112 aa3.36□□□□□ -1.87
RTN4-215ENST00000491592 DHRS4-AS1Q9P1J3 65 aa3.36□□□□□ -1.87
RTN4-215ENST00000491592 KNTC1P50748 2209 aa3.36□□□□□ -1.87
RTN4-215ENST00000491592 IGLV3-9A0A075B6K5 115 aa3.35□□□□□ -1.87
RTN4-215ENST00000491592 IGKV2D-26A0A0A0MRZ7 120 aa3.35□□□□□ -1.87
RTN4-215ENST00000491592 A0A0J9YXY3 114 aa3.35□□□□□ -1.87
RTN4-215ENST00000491592 MYMXA0A1B0GTQ4 84 aa3.35□□□□□ -1.87
RTN4-215ENST00000491592 LINC01549A6NIU2 74 aa3.35□□□□□ -1.87
RTN4-215ENST00000491592 KRTAP4-16G5E9R7 235 aaPredicted RBP3.35□□□□□ -1.87
RTN4-215ENST00000491592 H3BRN7 92 aa3.35□□□□□ -1.87
RTN4-215ENST00000491592 C19orf84I3L1E1 186 aa3.35□□□□□ -1.87
RTN4-215ENST00000491592 SH2D1AO60880 128 aa3.35□□□□□ -1.87
RTN4-215ENST00000491592 IGHV3-11P01762 117 aa3.35□□□□□ -1.87
RTN4-215ENST00000491592 ZNF688P0C7X2 276 aa3.35□□□□□ -1.87
RTN4-215ENST00000491592 ASIPP42127 132 aa3.35□□□□□ -1.87
RTN4-215ENST00000491592 CRIP1P50238 77 aa3.35□□□□□ -1.87
RTN4-215ENST00000491592 LYZP61626 148 aa3.35□□□□□ -1.87
RTN4-215ENST00000491592 DIAPH2-AS1Q14236 149 aa3.35□□□□□ -1.87
RTN4-215ENST00000491592 CFAP126Q5VTH2 177 aa3.35□□□□□ -1.87
RTN4-215ENST00000491592 KRTAP5-1Q6L8H4 278 aa3.35□□□□□ -1.87
RTN4-215ENST00000491592 CEMP1Q6PRD7 247 aaPredicted RBP3.35□□□□□ -1.87
RTN4-215ENST00000491592 Q6ZUT4 128 aa3.35□□□□□ -1.87
RTN4-215ENST00000491592 TEN1Q86WV5 123 aa3.35□□□□□ -1.87
RTN4-215ENST00000491592 SBSPONQ8IVN8 264 aa3.35□□□□□ -1.87
RTN4-215ENST00000491592 NPBQ8NG41 125 aa3.35□□□□□ -1.87
RTN4-215ENST00000491592 DCANP1Q8TF63 244 aa3.35□□□□□ -1.87
RTN4-215ENST00000491592 C7orf33Q8WU49 177 aa3.35□□□□□ -1.87
RTN4-215ENST00000491592 GAFA1Q96PS6 74 aa3.35□□□□□ -1.87
RTN4-215ENST00000491592 MRPL36Q9P0J6 103 aaKnown RBP3.35□□□□□ -1.87
RTN4-215ENST00000491592 PRR14LQ5THK1 2151 aa3.35□□□□□ -1.87
RTN4-215ENST00000491592 INTS1Q8N201 2190 aaKnown RBP3.35□□□□□ -1.87
RTN4-215ENST00000491592 CEP350Q5VT06 3117 aa3.35□□□□□ -1.87
RTN4-215ENST00000491592 IGLV1-50A0A075B6I6 118 aa3.34□□□□□ -1.87
RTN4-215ENST00000491592 TRAV12-2A0A075B6T6 113 aa3.34□□□□□ -1.87
RTN4-215ENST00000491592 IGHV1-18A0A0C4DH31 117 aa3.34□□□□□ -1.87
RTN4-215ENST00000491592 E7EUB6 86 aa3.34□□□□□ -1.87
RTN4-215ENST00000491592 TMEM256-PLSCR3K7ERE1 68 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms