RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	LGALS3	P17931	250 aa	Known RBP	4.69	□□□□□ -1.66
FN1-223	ENST00000490833	SRD5A1	P18405	259 aa		4.69	□□□□□ -1.66
FN1-223	ENST00000490833	DEFB131A	P59861	70 aa		4.69	□□□□□ -1.66
FN1-223	ENST00000490833	BEAN1	Q3B7T3	259 aa		4.69	□□□□□ -1.66
FN1-223	ENST00000490833	AMMECR1L	Q6DCA0	310 aa		4.69	□□□□□ -1.66
FN1-223	ENST00000490833	AMTN	Q6UX39	209 aa		4.69	□□□□□ -1.66
FN1-223	ENST00000490833	C20orf203	Q8NBC4	194 aa		4.69	□□□□□ -1.66
FN1-223	ENST00000490833	KLHL30-AS1	Q8NEE0	82 aa		4.69	□□□□□ -1.66
FN1-223	ENST00000490833	RNF183	Q96D59	192 aa		4.69	□□□□□ -1.66
FN1-223	ENST00000490833	LINC01587	Q99440	93 aa		4.69	□□□□□ -1.66
FN1-223	ENST00000490833	TIMM21	Q9BVV7	248 aa		4.69	□□□□□ -1.66
FN1-223	ENST00000490833	SPANXB1	Q9NS25	103 aa	Predicted RBP	4.69	□□□□□ -1.66
FN1-223	ENST00000490833	TP53TG1	Q9Y2A0	90 aa		4.69	□□□□□ -1.66
FN1-223	ENST00000490833	MAST4	O15021	2626 aa		4.69	□□□□□ -1.66
FN1-223	ENST00000490833	PRRC2A	P48634	2157 aa	Known RBP	4.68	□□□□□ -1.66
FN1-223	ENST00000490833	UNC79	Q9P2D8	2635 aa		4.68	□□□□□ -1.66
FN1-223	ENST00000490833		A0A1B0GWB2	263 aa		4.68	□□□□□ -1.66
FN1-223	ENST00000490833	ZNF815P	A8K554	130 aa		4.68	□□□□□ -1.66
FN1-223	ENST00000490833	TMEM238	C9JI98	176 aa		4.68	□□□□□ -1.66
FN1-223	ENST00000490833		H7C423	109 aa		4.68	□□□□□ -1.66
FN1-223	ENST00000490833	NDUFA7	O95182	113 aa		4.68	□□□□□ -1.66
FN1-223	ENST00000490833	RPL24	P83731	157 aa	Known RBP	4.68	□□□□□ -1.66
FN1-223	ENST00000490833	DAZ2	Q13117	558 aa	Known RBP	4.68	□□□□□ -1.66
FN1-223	ENST00000490833	SPINK13	Q1W4C9	94 aa		4.68	□□□□□ -1.66
FN1-223	ENST00000490833	FAM74A4	Q5TZK3	123 aa		4.68	□□□□□ -1.66
FN1-223	ENST00000490833	NEGR1	Q7Z3B1	354 aa		4.68	□□□□□ -1.66
FN1-223	ENST00000490833	DAZ4	Q86SG3	579 aa	Known RBP	4.68	□□□□□ -1.66
FN1-223	ENST00000490833	PCP2	Q8IVA1	136 aa		4.68	□□□□□ -1.66
FN1-223	ENST00000490833	RPL39L	Q96EH5	51 aa	Known RBP	4.68	□□□□□ -1.66
FN1-223	ENST00000490833	MCRIP2	Q9BUT9	160 aa	Known RBP	4.68	□□□□□ -1.66
FN1-223	ENST00000490833	DAZ3	Q9NR90	486 aa	Known RBP	4.68	□□□□□ -1.66
FN1-223	ENST00000490833	SPCS1	Q9Y6A9	102 aa		4.68	□□□□□ -1.66
FN1-223	ENST00000490833	AKAP6	Q13023	2319 aa		4.67	□□□□□ -1.66
FN1-223	ENST00000490833		H3BUT2	72 aa		4.67	□□□□□ -1.66
FN1-223	ENST00000490833		J3QKU1	62 aa		4.67	□□□□□ -1.66
FN1-223	ENST00000490833	CCL24	O00175	119 aa		4.67	□□□□□ -1.66
FN1-223	ENST00000490833	LEPROT	O15243	131 aa		4.67	□□□□□ -1.66
FN1-223	ENST00000490833	IGHV3-53	P01767	116 aa		4.67	□□□□□ -1.66
FN1-223	ENST00000490833	INSL3	P51460	131 aa		4.67	□□□□□ -1.66
FN1-223	ENST00000490833	FXYD7	P58549	80 aa		4.67	□□□□□ -1.66
FN1-223	ENST00000490833	MRPS36	P82909	103 aa	Known RBP	4.67	□□□□□ -1.66
FN1-223	ENST00000490833	FHL3	Q13643	280 aa		4.67	□□□□□ -1.66
FN1-223	ENST00000490833	CIRBP	Q14011	172 aa	Known RBP	4.67	□□□□□ -1.66
FN1-223	ENST00000490833	COTL1	Q14019	142 aa		4.67	□□□□□ -1.66
FN1-223	ENST00000490833	KHDC1L	Q5JSQ8	128 aa		4.67	□□□□□ -1.66
FN1-223	ENST00000490833	TMEM170B	Q5T4T1	132 aa		4.67	□□□□□ -1.66
FN1-223	ENST00000490833	DLX4	Q92988	240 aa	Predicted RBP	4.67	□□□□□ -1.66
FN1-223	ENST00000490833	PRADC1	Q9BSG0	188 aa		4.67	□□□□□ -1.66
FN1-223	ENST00000490833	YAE1D1	Q9NRH1	226 aa		4.67	□□□□□ -1.66
FN1-223	ENST00000490833	CSDC2	Q9Y534	153 aa	Known RBP	4.67	□□□□□ -1.66
FN1-223	ENST00000490833	SMG1	Q96Q15	3661 aa	Known RBP	4.67	□□□□□ -1.66
FN1-223	ENST00000490833	NAV2	Q8IVL1	2488 aa		4.66	□□□□□ -1.66
FN1-223	ENST00000490833	LRBA	P50851	2863 aa		4.66	□□□□□ -1.66
FN1-223	ENST00000490833		A0A087WWL8	130 aa		4.66	□□□□□ -1.66
FN1-223	ENST00000490833		A0A0J9YXY3	114 aa		4.66	□□□□□ -1.66
FN1-223	ENST00000490833	TINCR	A0A1B0GVN0	87 aa		4.66	□□□□□ -1.66
FN1-223	ENST00000490833		H3BS24	57 aa		4.66	□□□□□ -1.66
FN1-223	ENST00000490833		J3QQQ9	107 aa		4.66	□□□□□ -1.66
FN1-223	ENST00000490833	RS1	O15537	224 aa		4.66	□□□□□ -1.66
FN1-223	ENST00000490833	GAS8-AS1	O95177	125 aa		4.66	□□□□□ -1.66
FN1-223	ENST00000490833	RPL36A	P83881	106 aa	Known RBP	4.66	□□□□□ -1.66
FN1-223	ENST00000490833	C12orf74	Q32Q52	190 aa		4.66	□□□□□ -1.66
FN1-223	ENST00000490833	TMEM95	Q3KNT9	176 aa		4.66	□□□□□ -1.66
FN1-223	ENST00000490833	PRR31	Q5SQ13	230 aa		4.66	□□□□□ -1.66
FN1-223	ENST00000490833	DGAT2L7P	Q6IED9	249 aa		4.66	□□□□□ -1.66
FN1-223	ENST00000490833	SFTA2	Q6UW10	78 aa		4.66	□□□□□ -1.66
FN1-223	ENST00000490833		Q6ZSV7	163 aa		4.66	□□□□□ -1.66
FN1-223	ENST00000490833	TMEM61	Q8N0U2	210 aa		4.66	□□□□□ -1.66
FN1-223	ENST00000490833	SLC25A29	Q8N8R3	303 aa		4.66	□□□□□ -1.66
FN1-223	ENST00000490833	TMEM263	Q8WUH6	116 aa	Known RBP	4.66	□□□□□ -1.66
FN1-223	ENST00000490833	RPL36AL	Q969Q0	106 aa	Known RBP	4.66	□□□□□ -1.66
FN1-223	ENST00000490833	BBC3	Q96PG8	261 aa	Predicted RBP	4.66	□□□□□ -1.66
FN1-223	ENST00000490833	MAP6D1	Q9H9H5	199 aa		4.66	□□□□□ -1.66
FN1-223	ENST00000490833	SPTAN1	Q13813	2472 aa	Known RBP	4.66	□□□□□ -1.66
FN1-223	ENST00000490833	HELZ2	Q9BYK8	2649 aa	Known RBP	4.65	□□□□□ -1.66
FN1-223	ENST00000490833	TRAV12-2	A0A075B6T6	113 aa		4.65	□□□□□ -1.67
FN1-223	ENST00000490833	IGKV2D-26	A0A0A0MRZ7	120 aa		4.65	□□□□□ -1.67
FN1-223	ENST00000490833	TRAV4	A0A0B4J268	109 aa		4.65	□□□□□ -1.67
FN1-223	ENST00000490833	DNAJC9-AS1	A6NH13	148 aa		4.65	□□□□□ -1.67
FN1-223	ENST00000490833	IGKV3-20	P01619	116 aa		4.65	□□□□□ -1.67
FN1-223	ENST00000490833	IFITM1	P13164	125 aa		4.65	□□□□□ -1.67
FN1-223	ENST00000490833	SLURP1	P55000	103 aa		4.65	□□□□□ -1.67
FN1-223	ENST00000490833	TCTA	P57738	103 aa		4.65	□□□□□ -1.67
FN1-223	ENST00000490833	TIRAP	P58753	221 aa		4.65	□□□□□ -1.67
FN1-223	ENST00000490833	OCIAD2	Q56VL3	154 aa		4.65	□□□□□ -1.67
FN1-223	ENST00000490833	UFSP1	Q6NVU6	142 aa		4.65	□□□□□ -1.67
FN1-223	ENST00000490833	NRGN	Q92686	78 aa		4.65	□□□□□ -1.67
FN1-223	ENST00000490833	C16orf74	Q96GX8	76 aa		4.65	□□□□□ -1.67
FN1-223	ENST00000490833	ZNF479	Q96JC4	524 aa		4.65	□□□□□ -1.67
FN1-223	ENST00000490833	AMELX	Q99217	191 aa		4.65	□□□□□ -1.67
FN1-223	ENST00000490833	GTSF1L	Q9H1H1	148 aa		4.65	□□□□□ -1.67
FN1-223	ENST00000490833	PPDPF	Q9H3Y8	114 aa		4.65	□□□□□ -1.67
FN1-223	ENST00000490833	NHP2	Q9NX24	153 aa	Known RBP	4.65	□□□□□ -1.67
FN1-223	ENST00000490833	HRNR	Q86YZ3	2850 aa	Predicted RBP	4.65	□□□□□ -1.67
FN1-223	ENST00000490833	ITPR1	Q14643	2758 aa		4.65	□□□□□ -1.67
FN1-223	ENST00000490833	TRBV7-3	A0A075B6L6	115 aa		4.64	□□□□□ -1.67
FN1-223	ENST00000490833	SMIM9	A6NGZ8	99 aa		4.64	□□□□□ -1.67
FN1-223	ENST00000490833	IGLL5	B9A064	214 aa		4.64	□□□□□ -1.67
FN1-223	ENST00000490833	TIMM17B	O60830	172 aa		4.64	□□□□□ -1.67
FN1-223	ENST00000490833	TSHB	P01222	138 aa		4.64	□□□□□ -1.67

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