RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 VSIG2Q96IQ7 327 aa9.36□□□□□ -0.91
TRAIP-210ENST00000489948 NIT2Q9NQR4 276 aa9.36□□□□□ -0.91
TRAIP-210ENST00000489948 TRAV26-1A0A087WT03 109 aa9.35□□□□□ -0.91
TRAIP-210ENST00000489948 PAX4O43316 350 aa9.35□□□□□ -0.91
TRAIP-210ENST00000489948 TRGC2P03986 189 aa9.35□□□□□ -0.91
TRAIP-210ENST00000489948 HTN3P15516 51 aa9.35□□□□□ -0.91
TRAIP-210ENST00000489948 RPL32P62910 135 aaKnown RBP9.35□□□□□ -0.91
TRAIP-210ENST00000489948 OR10J3Q5JRS4 329 aa9.35□□□□□ -0.91
TRAIP-210ENST00000489948 NEXN-AS1Q8NBZ9 246 aa9.35□□□□□ -0.91
TRAIP-210ENST00000489948 PHLDA1Q8WV24 401 aaPredicted RBP9.35□□□□□ -0.91
TRAIP-210ENST00000489948 PRELID3AQ96N28 172 aa9.35□□□□□ -0.91
TRAIP-210ENST00000489948 C20orf78Q9BR46 151 aa9.35□□□□□ -0.91
TRAIP-210ENST00000489948 ALKBH7Q9BT30 221 aaPredicted RBP9.35□□□□□ -0.91
TRAIP-210ENST00000489948 TRBV7-3A0A075B6L6 115 aa9.34□□□□□ -0.91
TRAIP-210ENST00000489948 PRSS47A8MTI9 375 aa9.34□□□□□ -0.91
TRAIP-210ENST00000489948 SMKR1H3BMG3 65 aa9.34□□□□□ -0.91
TRAIP-210ENST00000489948 GAS8-AS1O95177 125 aa9.34□□□□□ -0.91
TRAIP-210ENST00000489948 TNFRSF6BO95407 300 aa9.34□□□□□ -0.91
TRAIP-210ENST00000489948 P0DMU3 169 aa9.34□□□□□ -0.91
TRAIP-210ENST00000489948 FAM231AP0DMU4 169 aa9.34□□□□□ -0.91
TRAIP-210ENST00000489948 FAM231CP0DMU5 169 aa9.34□□□□□ -0.91
TRAIP-210ENST00000489948 RPL36AP83881 106 aaKnown RBP9.34□□□□□ -0.91
TRAIP-210ENST00000489948 KIAA1644Q3SXP7 199 aa9.34□□□□□ -0.91
TRAIP-210ENST00000489948 RPL36ALQ969Q0 106 aaKnown RBP9.34□□□□□ -0.91
TRAIP-210ENST00000489948 RPL39LQ96EH5 51 aaKnown RBP9.34□□□□□ -0.91
TRAIP-210ENST00000489948 NUPR2A6NF83 97 aa9.33□□□□□ -0.92
TRAIP-210ENST00000489948 NPYP01303 97 aa9.33□□□□□ -0.92
TRAIP-210ENST00000489948 SRIP30626 198 aa9.33□□□□□ -0.92
TRAIP-210ENST00000489948 SUMO2P61956 95 aaKnown RBP9.33□□□□□ -0.92
TRAIP-210ENST00000489948 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.33□□□□□ -0.92
TRAIP-210ENST00000489948 LYSTQ99698 3801 aa9.32□□□□□ -0.92
TRAIP-210ENST00000489948 GYPEP15421 78 aa9.32□□□□□ -0.92
TRAIP-210ENST00000489948 UBE2D3P61077 147 aa9.32□□□□□ -0.92
TRAIP-210ENST00000489948 UBE2D2P62837 147 aa9.32□□□□□ -0.92
TRAIP-210ENST00000489948 SH2D6Q7Z4S9 175 aa9.32□□□□□ -0.92
TRAIP-210ENST00000489948 C15orf53Q8NAA6 179 aa9.32□□□□□ -0.92
TRAIP-210ENST00000489948 WWC2-AS2Q96NR7 200 aa9.32□□□□□ -0.92
TRAIP-210ENST00000489948 ST20Q9HBF5 79 aa9.32□□□□□ -0.92
TRAIP-210ENST00000489948 Q9UF83 564 aa9.32□□□□□ -0.92
TRAIP-210ENST00000489948 ICOSQ9Y6W8 199 aa9.32□□□□□ -0.92
TRAIP-210ENST00000489948 VPS13DQ5THJ4 4388 aa9.32□□□□□ -0.92
TRAIP-210ENST00000489948 A0A0J9YY99 117 aa9.31□□□□□ -0.92
TRAIP-210ENST00000489948 TRBV27A0A0K0K1C4 114 aa9.31□□□□□ -0.92
TRAIP-210ENST00000489948 LOC100131303A0A0U1RQF7 123 aa9.31□□□□□ -0.92
TRAIP-210ENST00000489948 SDHAF1A6NFY7 115 aa9.31□□□□□ -0.92
TRAIP-210ENST00000489948 POLR2KP53803 58 aaKnown RBP9.31□□□□□ -0.92
TRAIP-210ENST00000489948 MRPL23Q16540 153 aaKnown RBP9.31□□□□□ -0.92
TRAIP-210ENST00000489948 DAZ4Q86SG3 579 aaKnown RBP9.31□□□□□ -0.92
TRAIP-210ENST00000489948 TMEM70Q9BUB7 260 aa9.31□□□□□ -0.92
TRAIP-210ENST00000489948 SMIM2Q9BVW6 85 aa9.31□□□□□ -0.92
TRAIP-210ENST00000489948 MAP1LC3AQ9H492 121 aa9.31□□□□□ -0.92
TRAIP-210ENST00000489948 DAZ3Q9NR90 486 aaKnown RBP9.31□□□□□ -0.92
TRAIP-210ENST00000489948 TNFRSF18Q9Y5U5 241 aa9.31□□□□□ -0.92
TRAIP-210ENST00000489948 CEMP1Q6PRD7 247 aaPredicted RBP9.3□□□□□ -0.92
TRAIP-210ENST00000489948 ZNRF2Q8NHG8 242 aa9.3□□□□□ -0.92
TRAIP-210ENST00000489948 C18orf32Q8TCD1 76 aa9.3□□□□□ -0.92
TRAIP-210ENST00000489948 DNAH1Q9P2D7 4330 aa9.3□□□□□ -0.92
TRAIP-210ENST00000489948 A0A096LPF7 62 aa9.29□□□□□ -0.92
TRAIP-210ENST00000489948 GAGE12JA6NER3 117 aa9.29□□□□□ -0.92
TRAIP-210ENST00000489948 C1orf196B1AJZ1 125 aa9.29□□□□□ -0.92
TRAIP-210ENST00000489948 TCTAP57738 103 aa9.29□□□□□ -0.92
TRAIP-210ENST00000489948 GAGE1Q13065 139 aa9.29□□□□□ -0.92
TRAIP-210ENST00000489948 GAGE4Q13068 117 aa9.29□□□□□ -0.92
TRAIP-210ENST00000489948 GAGE5Q13069 117 aa9.29□□□□□ -0.92
TRAIP-210ENST00000489948 GAGE13Q4V321 117 aa9.29□□□□□ -0.92
TRAIP-210ENST00000489948 NXT2Q9NPJ8 142 aaKnown RBP9.29□□□□□ -0.92
TRAIP-210ENST00000489948 ALMS1Q8TCU4 4167 aa9.28□□□□□ -0.92
TRAIP-210ENST00000489948 IGLV2-18A0A075B6J9 118 aa9.28□□□□□ -0.92
TRAIP-210ENST00000489948 K7EMI3 77 aa9.28□□□□□ -0.92
TRAIP-210ENST00000489948 VCYO14598 125 aa9.28□□□□□ -0.92
TRAIP-210ENST00000489948 TCAPO15273 167 aa9.28□□□□□ -0.92
TRAIP-210ENST00000489948 HIST1H2BKO60814 126 aa9.28□□□□□ -0.92
TRAIP-210ENST00000489948 HIST1H2BJP06899 126 aa9.28□□□□□ -0.92
TRAIP-210ENST00000489948 PMCHP20382 165 aa9.28□□□□□ -0.92
TRAIP-210ENST00000489948 HIST1H2BOP23527 126 aa9.28□□□□□ -0.92
TRAIP-210ENST00000489948 HIST1H2BBP33778 126 aa9.28□□□□□ -0.92
TRAIP-210ENST00000489948 TIRAPP58753 221 aa9.28□□□□□ -0.92
TRAIP-210ENST00000489948 HIST1H2BDP58876 126 aa9.28□□□□□ -0.92
TRAIP-210ENST00000489948 HIST1H2BCP62807 126 aa9.28□□□□□ -0.92
TRAIP-210ENST00000489948 Q0VG73 95 aa9.28□□□□□ -0.92
TRAIP-210ENST00000489948 HIST2H2BEQ16778 126 aa9.28□□□□□ -0.92
TRAIP-210ENST00000489948 TMEM97Q5BJF2 176 aa9.28□□□□□ -0.92
TRAIP-210ENST00000489948 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.28□□□□□ -0.92
TRAIP-210ENST00000489948 MUC7Q8TAX7 377 aa9.28□□□□□ -0.92
TRAIP-210ENST00000489948 HIST1H2BHQ93079 126 aa9.28□□□□□ -0.92
TRAIP-210ENST00000489948 HIST1H2BNQ99877 126 aa9.28□□□□□ -0.92
TRAIP-210ENST00000489948 HIST1H2BMQ99879 126 aa9.28□□□□□ -0.92
TRAIP-210ENST00000489948 KLK5Q9Y337 293 aaPredicted RBP9.28□□□□□ -0.92
TRAIP-210ENST00000489948 BIRC6Q9NR09 4857 aa9.28□□□□□ -0.92
TRAIP-210ENST00000489948 LINC01546A6NGU7 62 aa9.27□□□□□ -0.93
TRAIP-210ENST00000489948 I3L3M4 83 aa9.27□□□□□ -0.93
TRAIP-210ENST00000489948 NEGR1Q7Z3B1 354 aa9.27□□□□□ -0.93
TRAIP-210ENST00000489948 Q8N8P6 123 aa9.27□□□□□ -0.93
TRAIP-210ENST00000489948 ATP6V0E2Q8NHE4 81 aa9.27□□□□□ -0.93
TRAIP-210ENST00000489948 IGLL5B9A064 214 aa9.26□□□□□ -0.93
TRAIP-210ENST00000489948 RAB5BP61020 215 aa9.26□□□□□ -0.93
TRAIP-210ENST00000489948 KIR2DL4Q99706 377 aa9.26□□□□□ -0.93
TRAIP-210ENST00000489948 GTSF1LQ9H1H1 148 aa9.26□□□□□ -0.93
TRAIP-210ENST00000489948 DNAH6Q9C0G6 4158 aa9.26□□□□□ -0.93
TRAIP-210ENST00000489948 TSHBP01222 138 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms