RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 PRSS47A8MTI9 375 aa14.81□□□□□ -0.04
SND1-214ENST00000489417 NUPR1O60356 82 aa14.81□□□□□ -0.04
SND1-214ENST00000489417 IFI27P40305 119 aaPredicted RBP14.81□□□□□ -0.04
SND1-214ENST00000489417 SUMO2P61956 95 aaKnown RBP14.81□□□□□ -0.04
SND1-214ENST00000489417 NIT2Q9NQR4 276 aa14.81□□□□□ -0.04
SND1-214ENST00000489417 FA2HQ7L5A8 372 aa14.8□□□□□ -0.04
SND1-214ENST00000489417 ST20Q9HBF5 79 aa14.8□□□□□ -0.04
SND1-214ENST00000489417 TRGV4A0A0C4DH28 118 aa14.79□□□□□ -0.04
SND1-214ENST00000489417 LINC00614P0C842 121 aa14.79□□□□□ -0.04
SND1-214ENST00000489417 P0DMU3 169 aa14.79□□□□□ -0.04
SND1-214ENST00000489417 FAM231AP0DMU4 169 aa14.79□□□□□ -0.04
SND1-214ENST00000489417 FAM231CP0DMU5 169 aa14.79□□□□□ -0.04
SND1-214ENST00000489417 ESDP10768 282 aa14.79□□□□□ -0.04
SND1-214ENST00000489417 PMCHP20382 165 aa14.79□□□□□ -0.04
SND1-214ENST00000489417 HIST3H2BBQ8N257 126 aa14.79□□□□□ -0.04
SND1-214ENST00000489417 CHCHD1Q96BP2 118 aaKnown RBP14.79□□□□□ -0.04
SND1-214ENST00000489417 SMIM2Q9BVW6 85 aa14.79□□□□□ -0.04
SND1-214ENST00000489417 NXT2Q9NPJ8 142 aaKnown RBP14.79□□□□□ -0.04
SND1-214ENST00000489417 FHL2Q14192 279 aa14.78□□□□□ -0.04
SND1-214ENST00000489417 PDZD11Q5EBL8 140 aa14.78□□□□□ -0.04
SND1-214ENST00000489417 Q8N8P6 123 aa14.78□□□□□ -0.04
SND1-214ENST00000489417 ZMAT4Q9H898 229 aa14.78□□□□□ -0.04
SND1-214ENST00000489417 K7EQD1 137 aa14.77□□□□□ -0.04
SND1-214ENST00000489417 RPL32P62910 135 aaKnown RBP14.77□□□□□ -0.04
SND1-214ENST00000489417 B9D2Q9BPU9 175 aa14.77□□□□□ -0.04
SND1-214ENST00000489417 IGLV2-18A0A075B6J9 118 aa14.76□□□□□ -0.05
SND1-214ENST00000489417 A0A0J9YWU9 116 aa14.76□□□□□ -0.05
SND1-214ENST00000489417 SLC25A29Q8N8R3 303 aa14.76□□□□□ -0.05
SND1-214ENST00000489417 NEXN-AS1Q8NBZ9 246 aa14.76□□□□□ -0.05
SND1-214ENST00000489417 TRBV10-1A0A0K0K1A3 114 aa14.75□□□□□ -0.05
SND1-214ENST00000489417 TRBV6-4A0A1B0GX49 114 aa14.75□□□□□ -0.05
SND1-214ENST00000489417 HSBP1O75506 76 aa14.75□□□□□ -0.05
SND1-214ENST00000489417 S100A2P29034 98 aa14.75□□□□□ -0.05
SND1-214ENST00000489417 POLR2KP53803 58 aaKnown RBP14.75□□□□□ -0.05
SND1-214ENST00000489417 DNAJC30Q96LL9 226 aa14.75□□□□□ -0.05
SND1-214ENST00000489417 TMEM70Q9BUB7 260 aa14.75□□□□□ -0.05
SND1-214ENST00000489417 AP5S1Q9NUS5 200 aa14.75□□□□□ -0.05
SND1-214ENST00000489417 TNFRSF18Q9Y5U5 241 aa14.75□□□□□ -0.05
SND1-214ENST00000489417 SDHAF1A6NFY7 115 aa14.75□□□□□ -0.05
SND1-214ENST00000489417 ATP5G1P05496 136 aa14.75□□□□□ -0.05
SND1-214ENST00000489417 Q9UF83 564 aa14.75□□□□□ -0.05
SND1-214ENST00000489417 LINC01546A6NGU7 62 aa14.74□□□□□ -0.05
SND1-214ENST00000489417 C12orf74Q32Q52 190 aa14.74□□□□□ -0.05
SND1-214ENST00000489417 VCYO14598 125 aa14.73□□□□□ -0.05
SND1-214ENST00000489417 DEFA6Q01524 100 aa14.73□□□□□ -0.05
SND1-214ENST00000489417 RHOHQ15669 191 aa14.73□□□□□ -0.05
SND1-214ENST00000489417 NEGR1Q7Z3B1 354 aa14.73□□□□□ -0.05
SND1-214ENST00000489417 LOC105371267A0A1B0GV96 52 aa14.72□□□□□ -0.05
SND1-214ENST00000489417 IFITM10A6NMD0 228 aa14.72□□□□□ -0.05
SND1-214ENST00000489417 HHLA3Q9XRX5 114 aa14.72□□□□□ -0.05
SND1-214ENST00000489417 TRBV27A0A0K0K1C4 114 aa14.71□□□□□ -0.05
SND1-214ENST00000489417 TCAPO15273 167 aa14.71□□□□□ -0.05
SND1-214ENST00000489417 AMTP48728 403 aa14.71□□□□□ -0.05
SND1-214ENST00000489417 RPL36AP83881 106 aaKnown RBP14.71□□□□□ -0.05
SND1-214ENST00000489417 FAM19A2Q8N3H0 131 aa14.71□□□□□ -0.05
SND1-214ENST00000489417 RPL36ALQ969Q0 106 aaKnown RBP14.71□□□□□ -0.05
SND1-214ENST00000489417 TMEM18Q96B42 140 aa14.71□□□□□ -0.05
SND1-214ENST00000489417 PRADC1Q9BSG0 188 aa14.71□□□□□ -0.05
SND1-214ENST00000489417 PMCHL1Q16048 86 aa14.7□□□□□ -0.06
SND1-214ENST00000489417 ZNRF2Q8NHG8 242 aa14.7□□□□□ -0.06
SND1-214ENST00000489417 HIST1H2BLQ99880 126 aa14.7□□□□□ -0.06
SND1-214ENST00000489417 PRO0255Q9UI72 69 aa14.7□□□□□ -0.06
SND1-214ENST00000489417 TRBV7-3A0A075B6L6 115 aa14.69□□□□□ -0.06
SND1-214ENST00000489417 IGHV1-24A0A0C4DH33 117 aa14.69□□□□□ -0.06
SND1-214ENST00000489417 FABP4P15090 132 aa14.69□□□□□ -0.06
SND1-214ENST00000489417 CRYBA4P53673 196 aa14.69□□□□□ -0.06
SND1-214ENST00000489417 KIR2DL4Q99706 377 aa14.69□□□□□ -0.06
SND1-214ENST00000489417 FBN3Q75N90 2809 aa14.69□□□□□ -0.06
SND1-214ENST00000489417 LOC100131303A0A0U1RQF7 123 aa14.68□□□□□ -0.06
SND1-214ENST00000489417 GAGE12JA6NER3 117 aa14.68□□□□□ -0.06
SND1-214ENST00000489417 F5H768 121 aa14.68□□□□□ -0.06
SND1-214ENST00000489417 I3L3M4 83 aa14.68□□□□□ -0.06
SND1-214ENST00000489417 K7EMI3 77 aa14.68□□□□□ -0.06
SND1-214ENST00000489417 HTN3P15516 51 aa14.68□□□□□ -0.06
SND1-214ENST00000489417 GAGE1Q13065 139 aa14.68□□□□□ -0.06
SND1-214ENST00000489417 GAGE4Q13068 117 aa14.68□□□□□ -0.06
SND1-214ENST00000489417 GAGE5Q13069 117 aa14.68□□□□□ -0.06
SND1-214ENST00000489417 LAGE3Q14657 143 aa14.68□□□□□ -0.06
SND1-214ENST00000489417 GAGE13Q4V321 117 aa14.68□□□□□ -0.06
SND1-214ENST00000489417 C11orf45Q8TAV5 145 aa14.68□□□□□ -0.06
SND1-214ENST00000489417 ORMDL2Q53FV1 153 aa14.67□□□□□ -0.06
SND1-214ENST00000489417 PACRGQ96M98 296 aaPredicted RBP14.67□□□□□ -0.06
SND1-214ENST00000489417 UBE2D3P61077 147 aa14.66□□□□□ -0.06
SND1-214ENST00000489417 UBE2D2P62837 147 aa14.66□□□□□ -0.06
SND1-214ENST00000489417 A0A096LNJ9 63 aa14.66□□□□□ -0.06
SND1-214ENST00000489417 PAX4O43316 350 aa14.66□□□□□ -0.06
SND1-214ENST00000489417 TSHBP01222 138 aa14.66□□□□□ -0.06
SND1-214ENST00000489417 NHLRC4P0CG21 123 aaPredicted RBP14.66□□□□□ -0.06
SND1-214ENST00000489417 FCER1GP30273 86 aa14.66□□□□□ -0.06
SND1-214ENST00000489417 NANOS2P60321 138 aaKnown RBP14.66□□□□□ -0.06
SND1-214ENST00000489417 Q6ZTC4 211 aa14.66□□□□□ -0.06
SND1-214ENST00000489417 PHLDA1Q8WV24 401 aaPredicted RBP14.66□□□□□ -0.06
SND1-214ENST00000489417 HBDP02042 147 aa14.65□□□□□ -0.06
SND1-214ENST00000489417 GYPEP15421 78 aa14.65□□□□□ -0.06
SND1-214ENST00000489417 DEFB104AQ8WTQ1 72 aa14.65□□□□□ -0.06
SND1-214ENST00000489417 IGHV3-38A0A0C4DH36 116 aa14.64□□□□□ -0.07
SND1-214ENST00000489417 NUDT3O95989 172 aa14.64□□□□□ -0.07
SND1-214ENST00000489417 LINC00694P0DN24 101 aa14.64□□□□□ -0.07
SND1-214ENST00000489417 TENM3Q9P273 2699 aa14.64□□□□□ -0.07
SND1-214ENST00000489417 A0A0J9YY99 117 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms