RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 C11orf1Q9H5F2 150 aa8.78□□□□□ -1
UFD1-209ENST00000489406 LOC107984640A0A0U1RRK4 108 aa8.77□□□□□ -1.01
UFD1-209ENST00000489406 Q9H521 79 aa8.77□□□□□ -1.01
UFD1-209ENST00000489406 RPP21Q9H633 154 aaKnown RBP8.77□□□□□ -1.01
UFD1-209ENST00000489406 TPT1P13693 172 aaKnown RBP8.76□□□□□ -1.01
UFD1-209ENST00000489406 MT1HP80294 61 aa8.76□□□□□ -1.01
UFD1-209ENST00000489406 FLI1Q01543 452 aaPredicted RBP8.76□□□□□ -1.01
UFD1-209ENST00000489406 FAM162BQ5T6X4 162 aa8.76□□□□□ -1.01
UFD1-209ENST00000489406 STX12Q86Y82 276 aa8.76□□□□□ -1.01
UFD1-209ENST00000489406 TMEM252Q8N6L7 170 aa8.76□□□□□ -1.01
UFD1-209ENST00000489406 CHCHD10Q8WYQ3 142 aaPredicted RBP8.76□□□□□ -1.01
UFD1-209ENST00000489406 SDHCQ99643 169 aaPredicted RBP8.76□□□□□ -1.01
UFD1-209ENST00000489406 VCX3AQ9NNX9 186 aa8.76□□□□□ -1.01
UFD1-209ENST00000489406 RSL24D1Q9UHA3 163 aaKnown RBP8.76□□□□□ -1.01
UFD1-209ENST00000489406 FABP5P3A8MUU1 101 aa8.75□□□□□ -1.01
UFD1-209ENST00000489406 M0R036 132 aa8.75□□□□□ -1.01
UFD1-209ENST00000489406 SYCNQ0VAF6 134 aa8.75□□□□□ -1.01
UFD1-209ENST00000489406 ASB16-AS1Q495Z4 193 aa8.75□□□□□ -1.01
UFD1-209ENST00000489406 DNLZQ5SXM8 178 aa8.75□□□□□ -1.01
UFD1-209ENST00000489406 OR5C1Q8NGR4 320 aa8.75□□□□□ -1.01
UFD1-209ENST00000489406 SERTM2A0A1B0GWG4 89 aa8.74□□□□□ -1.01
UFD1-209ENST00000489406 TCRAP04437 139 aa8.74□□□□□ -1.01
UFD1-209ENST00000489406 BCL2P10415 239 aa8.74□□□□□ -1.01
UFD1-209ENST00000489406 TAS2R45P59539 299 aa8.74□□□□□ -1.01
UFD1-209ENST00000489406 ZFP82Q8N141 532 aa8.74□□□□□ -1.01
UFD1-209ENST00000489406 TMEM243Q9BU79 118 aa8.74□□□□□ -1.01
UFD1-209ENST00000489406 NAA50Q9GZZ1 169 aaKnown RBP8.74□□□□□ -1.01
UFD1-209ENST00000489406 KRBOX1C9JBD0 128 aa8.73□□□□□ -1.01
UFD1-209ENST00000489406 F5H697 171 aa8.73□□□□□ -1.01
UFD1-209ENST00000489406 K7EQM0 130 aa8.73□□□□□ -1.01
UFD1-209ENST00000489406 TOMM5Q8N4H5 51 aa8.73□□□□□ -1.01
UFD1-209ENST00000489406 SSBP4Q9BWG4 385 aaPredicted RBP8.73□□□□□ -1.01
UFD1-209ENST00000489406 FGF6P10767 208 aa8.72□□□□□ -1.01
UFD1-209ENST00000489406 PVALBP20472 110 aaPredicted RBP8.72□□□□□ -1.01
UFD1-209ENST00000489406 KRTAP10-6P60371 365 aaPredicted RBP8.72□□□□□ -1.01
UFD1-209ENST00000489406 SAPCD1Q5SSQ6 148 aa8.72□□□□□ -1.01
UFD1-209ENST00000489406 TYMSOSQ8TAI1 123 aa8.72□□□□□ -1.01
UFD1-209ENST00000489406 KCNIP2Q9NS61 270 aa8.72□□□□□ -1.01
UFD1-209ENST00000489406 FLVCR2Q9UPI3 526 aa8.72□□□□□ -1.01
UFD1-209ENST00000489406 A0A087X002 238 aa8.71□□□□□ -1.02
UFD1-209ENST00000489406 AP3S2P59780 193 aa8.71□□□□□ -1.02
UFD1-209ENST00000489406 FOXI1Q12951 378 aa8.71□□□□□ -1.02
UFD1-209ENST00000489406 SPCS2Q15005 226 aa8.71□□□□□ -1.02
UFD1-209ENST00000489406 LINC00173Q6ZV60 143 aa8.71□□□□□ -1.02
UFD1-209ENST00000489406 PPDPFQ9H3Y8 114 aa8.71□□□□□ -1.02
UFD1-209ENST00000489406 TMSB15BA0A087X1C1 80 aa8.7□□□□□ -1.02
UFD1-209ENST00000489406 FAM25EA8MYX2 175 aa8.7□□□□□ -1.02
UFD1-209ENST00000489406 MRPS26Q9BYN8 205 aaKnown RBP8.7□□□□□ -1.02
UFD1-209ENST00000489406 IGHV1-58A0A0C4DH39 117 aa8.69□□□□□ -1.02
UFD1-209ENST00000489406 ZNF561-AS1K7EIQ3 104 aa8.69□□□□□ -1.02
UFD1-209ENST00000489406 UBE2L6O14933 153 aa8.69□□□□□ -1.02
UFD1-209ENST00000489406 NHLH2Q02577 135 aa8.69□□□□□ -1.02
UFD1-209ENST00000489406 C5orf17Q8NAS9 161 aa8.69□□□□□ -1.02
UFD1-209ENST00000489406 WDR61Q9GZS3 305 aaKnown RBP8.69□□□□□ -1.02
UFD1-209ENST00000489406 SSPOA2VEC9 5147 aa8.69□□□□□ -1.02
UFD1-209ENST00000489406 A0A087WXM4 84 aa8.68□□□□□ -1.02
UFD1-209ENST00000489406 C17orf112F2Z3M2 114 aa8.68□□□□□ -1.02
UFD1-209ENST00000489406 RPL18AQ02543 176 aaKnown RBP8.68□□□□□ -1.02
UFD1-209ENST00000489406 EIF5AL1Q6IS14 154 aaKnown RBP8.68□□□□□ -1.02
UFD1-209ENST00000489406 CRIP1P50238 77 aa8.67□□□□□ -1.02
UFD1-209ENST00000489406 TMBIM6P55061 237 aa8.67□□□□□ -1.02
UFD1-209ENST00000489406 TRAV34A0A0B4J273 112 aa8.66□□□□□ -1.02
UFD1-209ENST00000489406 RPL12P30050 165 aaKnown RBP8.66□□□□□ -1.02
UFD1-209ENST00000489406 CAMPP49913 170 aa8.66□□□□□ -1.02
UFD1-209ENST00000489406 PQLC2Q6ZP29 291 aa8.66□□□□□ -1.02
UFD1-209ENST00000489406 TSKUQ8WUA8 353 aa8.66□□□□□ -1.02
UFD1-209ENST00000489406 ARL2-SNX15V9GYD0 113 aa8.66□□□□□ -1.02
UFD1-209ENST00000489406 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.65□□□□□ -1.02
UFD1-209ENST00000489406 HMGB3O15347 200 aaKnown RBP8.65□□□□□ -1.02
UFD1-209ENST00000489406 SH2D1AO60880 128 aa8.65□□□□□ -1.02
UFD1-209ENST00000489406 XCL1P47992 114 aa8.65□□□□□ -1.02
UFD1-209ENST00000489406 MEF2BQ02080 365 aaPredicted RBP8.65□□□□□ -1.02
UFD1-209ENST00000489406 LINC00337Q8N6G1 96 aa8.65□□□□□ -1.02
UFD1-209ENST00000489406 EPDR1Q9UM22 224 aa8.65□□□□□ -1.02
UFD1-209ENST00000489406 TMA7Q9Y2S6 64 aaKnown RBP8.65□□□□□ -1.02
UFD1-209ENST00000489406 FAM168BA1KXE4 195 aa8.64□□□□□ -1.03
UFD1-209ENST00000489406 APOMO95445 188 aa8.64□□□□□ -1.03
UFD1-209ENST00000489406 SUMO1P63165 101 aaKnown RBP8.64□□□□□ -1.03
UFD1-209ENST00000489406 NUP35Q8NFH5 326 aa8.64□□□□□ -1.03
UFD1-209ENST00000489406 OR10AG1Q8NH19 301 aa8.64□□□□□ -1.03
UFD1-209ENST00000489406 ISOC2Q96AB3 205 aa8.64□□□□□ -1.03
UFD1-209ENST00000489406 IGLV4-69A0A075B6H9 119 aa8.63□□□□□ -1.03
UFD1-209ENST00000489406 NDUFB6O95139 128 aa8.63□□□□□ -1.03
UFD1-209ENST00000489406 DEFA3P59666 94 aa8.63□□□□□ -1.03
UFD1-209ENST00000489406 SEC61BP60468 96 aaKnown RBP8.63□□□□□ -1.03
UFD1-209ENST00000489406 RAB32Q13637 225 aa8.63□□□□□ -1.03
UFD1-209ENST00000489406 KRTAP19-2Q3LHN2 52 aa8.63□□□□□ -1.03
UFD1-209ENST00000489406 USH2AO75445 5202 aa8.63□□□□□ -1.03
UFD1-209ENST00000489406 H3BMQ9 156 aa8.62□□□□□ -1.03
UFD1-209ENST00000489406 PYDC2Q56P42 97 aa8.62□□□□□ -1.03
UFD1-209ENST00000489406 ZNF471Q9BX82 626 aaPredicted RBP8.62□□□□□ -1.03
UFD1-209ENST00000489406 FCGBPQ9Y6R7 5405 aaPredicted RBP8.61□□□□□ -1.03
UFD1-209ENST00000489406 MUC21A0A140T8X8 626 aa8.61□□□□□ -1.03
UFD1-209ENST00000489406 A0A1W2PPV4 95 aa8.61□□□□□ -1.03
UFD1-209ENST00000489406 ZNF861PO60384 105 aa8.61□□□□□ -1.03
UFD1-209ENST00000489406 TSHBP01222 138 aa8.61□□□□□ -1.03
UFD1-209ENST00000489406 NKX2-5P52952 324 aaPredicted RBP8.61□□□□□ -1.03
UFD1-209ENST00000489406 SSTP61278 116 aa8.61□□□□□ -1.03
UFD1-209ENST00000489406 UBE2BP63146 152 aa8.61□□□□□ -1.03
UFD1-209ENST00000489406 FAM19A5Q7Z5A7 132 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms