RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 M0QY20 66 aa8.6□□□□□ -1.03
TRAIP-209ENST00000488860 APCSP02743 223 aa8.6□□□□□ -1.03
TRAIP-209ENST00000488860 SRIP30626 198 aa8.6□□□□□ -1.03
TRAIP-209ENST00000488860 CKS2P33552 79 aa8.6□□□□□ -1.03
TRAIP-209ENST00000488860 RPL36AP83881 106 aaKnown RBP8.6□□□□□ -1.03
TRAIP-209ENST00000488860 OR10J3Q5JRS4 329 aa8.6□□□□□ -1.03
TRAIP-209ENST00000488860 NEXN-AS1Q8NBZ9 246 aa8.6□□□□□ -1.03
TRAIP-209ENST00000488860 RPL36ALQ969Q0 106 aaKnown RBP8.6□□□□□ -1.03
TRAIP-209ENST00000488860 RPL39LQ96EH5 51 aaKnown RBP8.6□□□□□ -1.03
TRAIP-209ENST00000488860 GNB1LQ9BYB4 327 aa8.6□□□□□ -1.03
TRAIP-209ENST00000488860 MRPL18Q9H0U6 180 aaKnown RBP8.6□□□□□ -1.03
TRAIP-209ENST00000488860 Q9UF83 564 aa8.6□□□□□ -1.03
TRAIP-209ENST00000488860 CSMD3Q7Z407 3707 aa8.6□□□□□ -1.03
TRAIP-209ENST00000488860 TRBV10-1A0A0K0K1A3 114 aa8.59□□□□□ -1.03
TRAIP-209ENST00000488860 GAS8-AS1O95177 125 aa8.59□□□□□ -1.03
TRAIP-209ENST00000488860 MT-ND6P03923 174 aa8.59□□□□□ -1.03
TRAIP-209ENST00000488860 C15orf53Q8NAA6 179 aa8.59□□□□□ -1.03
TRAIP-209ENST00000488860 ZNRF2Q8NHG8 242 aa8.59□□□□□ -1.03
TRAIP-209ENST00000488860 TRAPPC1Q9Y5R8 145 aa8.59□□□□□ -1.03
TRAIP-209ENST00000488860 TNFRSF18Q9Y5U5 241 aa8.59□□□□□ -1.03
TRAIP-209ENST00000488860 H3BNG1 76 aa8.58□□□□□ -1.04
TRAIP-209ENST00000488860 C3orf84H3BNL1 204 aa8.58□□□□□ -1.04
TRAIP-209ENST00000488860 RPS10P46783 165 aaKnown RBP8.58□□□□□ -1.04
TRAIP-209ENST00000488860 FABP9Q0Z7S8 132 aa8.58□□□□□ -1.04
TRAIP-209ENST00000488860 MRPL23Q16540 153 aaKnown RBP8.58□□□□□ -1.04
TRAIP-209ENST00000488860 KIAA1644Q3SXP7 199 aa8.58□□□□□ -1.04
TRAIP-209ENST00000488860 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.58□□□□□ -1.04
TRAIP-209ENST00000488860 IGHV3-38A0A0C4DH36 116 aa8.57□□□□□ -1.04
TRAIP-209ENST00000488860 CASC10Q5T4H9 136 aa8.57□□□□□ -1.04
TRAIP-209ENST00000488860 ORMDL3Q8N138 153 aa8.57□□□□□ -1.04
TRAIP-209ENST00000488860 PRELID3AQ96N28 172 aa8.57□□□□□ -1.04
TRAIP-209ENST00000488860 NIT2Q9NQR4 276 aa8.57□□□□□ -1.04
TRAIP-209ENST00000488860 TRBV7-3A0A075B6L6 115 aa8.56□□□□□ -1.04
TRAIP-209ENST00000488860 COLCA2A8K830 154 aa8.56□□□□□ -1.04
TRAIP-209ENST00000488860 NPYP01303 97 aa8.56□□□□□ -1.04
TRAIP-209ENST00000488860 PPBPP02775 128 aa8.56□□□□□ -1.04
TRAIP-209ENST00000488860 NRACQ8N912 160 aa8.56□□□□□ -1.04
TRAIP-209ENST00000488860 ATP6V0E2Q8NHE4 81 aa8.56□□□□□ -1.04
TRAIP-209ENST00000488860 DNAJC30Q96LL9 226 aa8.56□□□□□ -1.04
TRAIP-209ENST00000488860 ST20Q9HBF5 79 aa8.56□□□□□ -1.04
TRAIP-209ENST00000488860 APLNQ9ULZ1 77 aa8.56□□□□□ -1.04
TRAIP-209ENST00000488860 LINC00694P0DN24 101 aa8.55□□□□□ -1.04
TRAIP-209ENST00000488860 RAB5AP20339 215 aa8.55□□□□□ -1.04
TRAIP-209ENST00000488860 UBE2D3P61077 147 aa8.55□□□□□ -1.04
TRAIP-209ENST00000488860 UBE2D2P62837 147 aa8.55□□□□□ -1.04
TRAIP-209ENST00000488860 PLECQ15149 4684 aaKnown RBP8.55□□□□□ -1.04
TRAIP-209ENST00000488860 NEGR1Q7Z3B1 354 aa8.55□□□□□ -1.04
TRAIP-209ENST00000488860 DEFB104AQ8WTQ1 72 aa8.55□□□□□ -1.04
TRAIP-209ENST00000488860 TNFRSF6BO95407 300 aa8.54□□□□□ -1.04
TRAIP-209ENST00000488860 PPP1R17O96001 155 aa8.54□□□□□ -1.04
TRAIP-209ENST00000488860 TCTAP57738 103 aa8.54□□□□□ -1.04
TRAIP-209ENST00000488860 SH2D6Q7Z4S9 175 aa8.54□□□□□ -1.04
TRAIP-209ENST00000488860 TRBV6-5A0A0K0K1A5 114 aa8.53□□□□□ -1.04
TRAIP-209ENST00000488860 LOC389332A0A1B0GUA5 103 aa8.53□□□□□ -1.04
TRAIP-209ENST00000488860 SDHAF1A6NFY7 115 aa8.53□□□□□ -1.04
TRAIP-209ENST00000488860 SUMO2P61956 95 aaKnown RBP8.53□□□□□ -1.04
TRAIP-209ENST00000488860 UBE2DNLQ8IWF7 75 aa8.53□□□□□ -1.04
TRAIP-209ENST00000488860 MAP1LC3AQ9H492 121 aa8.53□□□□□ -1.04
TRAIP-209ENST00000488860 PHOX2AO14813 284 aa8.52□□□□□ -1.05
TRAIP-209ENST00000488860 TRGC2P03986 189 aa8.52□□□□□ -1.05
TRAIP-209ENST00000488860 PMCHP20382 165 aa8.52□□□□□ -1.05
TRAIP-209ENST00000488860 DAZ4Q86SG3 579 aaKnown RBP8.52□□□□□ -1.05
TRAIP-209ENST00000488860 TMEM70Q9BUB7 260 aa8.52□□□□□ -1.05
TRAIP-209ENST00000488860 DAZ3Q9NR90 486 aaKnown RBP8.52□□□□□ -1.05
TRAIP-209ENST00000488860 LAMTOR2Q9Y2Q5 125 aa8.52□□□□□ -1.05
TRAIP-209ENST00000488860 ALMS1Q8TCU4 4167 aa8.51□□□□□ -1.05
TRAIP-209ENST00000488860 CCL18P55774 89 aa8.51□□□□□ -1.05
TRAIP-209ENST00000488860 COTL1Q14019 142 aa8.51□□□□□ -1.05
TRAIP-209ENST00000488860 ESRGQ1W209 222 aa8.51□□□□□ -1.05
TRAIP-209ENST00000488860 C20orf78Q9BR46 151 aa8.51□□□□□ -1.05
TRAIP-209ENST00000488860 ALKBH7Q9BT30 221 aaPredicted RBP8.51□□□□□ -1.05
TRAIP-209ENST00000488860 SMIM2Q9BVW6 85 aa8.51□□□□□ -1.05
TRAIP-209ENST00000488860 GTSF1LQ9H1H1 148 aa8.51□□□□□ -1.05
TRAIP-209ENST00000488860 TENM2Q9NT68 2774 aa8.51□□□□□ -1.05
TRAIP-209ENST00000488860 I3L3M4 83 aa8.5□□□□□ -1.05
TRAIP-209ENST00000488860 IQCJQ1A5X6 159 aa8.5□□□□□ -1.05
TRAIP-209ENST00000488860 LYPD5Q6UWN5 251 aa8.5□□□□□ -1.05
TRAIP-209ENST00000488860 LYSTQ99698 3801 aa8.49□□□□□ -1.05
TRAIP-209ENST00000488860 VCYO14598 125 aa8.49□□□□□ -1.05
TRAIP-209ENST00000488860 FCER1GP30273 86 aa8.49□□□□□ -1.05
TRAIP-209ENST00000488860 POLR2KP53803 58 aaKnown RBP8.49□□□□□ -1.05
TRAIP-209ENST00000488860 LINC00588Q9Y4M8 146 aa8.49□□□□□ -1.05
TRAIP-209ENST00000488860 TRBV25-1A0A075B6N4 114 aa8.48□□□□□ -1.05
TRAIP-209ENST00000488860 IGHV1-24A0A0C4DH33 117 aa8.48□□□□□ -1.05
TRAIP-209ENST00000488860 TRBV27A0A0K0K1C4 114 aa8.48□□□□□ -1.05
TRAIP-209ENST00000488860 TCAPO15273 167 aa8.48□□□□□ -1.05
TRAIP-209ENST00000488860 TSHBP01222 138 aa8.48□□□□□ -1.05
TRAIP-209ENST00000488860 AMTP48728 403 aa8.48□□□□□ -1.05
TRAIP-209ENST00000488860 TMEM97Q5BJF2 176 aa8.48□□□□□ -1.05
TRAIP-209ENST00000488860 LELP1Q5T871 98 aa8.48□□□□□ -1.05
TRAIP-209ENST00000488860 KIR2DL4Q99706 377 aa8.48□□□□□ -1.05
TRAIP-209ENST00000488860 TRBV6-8A0A0A6YYG3 113 aa8.47□□□□□ -1.05
TRAIP-209ENST00000488860 TRAV8-6A0A0B4J262 113 aa8.47□□□□□ -1.05
TRAIP-209ENST00000488860 IFI27P40305 119 aaPredicted RBP8.47□□□□□ -1.05
TRAIP-209ENST00000488860 TIRAPP58753 221 aa8.47□□□□□ -1.05
TRAIP-209ENST00000488860 RPL32P62910 135 aaKnown RBP8.47□□□□□ -1.05
TRAIP-209ENST00000488860 NTM-AS1Q6ZSK4 140 aa8.47□□□□□ -1.05
TRAIP-209ENST00000488860 WFDC10BQ8IUB3 73 aa8.47□□□□□ -1.05
TRAIP-209ENST00000488860 PRSS3P2Q8NHM4 247 aa8.47□□□□□ -1.05
TRAIP-209ENST00000488860 C18orf32Q8TCD1 76 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms