RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 PRO0461Q9UI25 63 aa5.8□□□□□ -1.48
COL6A4P1-202ENST00000487147 ODF3BA8MYP8 253 aa5.8□□□□□ -1.48
COL6A4P1-202ENST00000487147 F8WDY8 70 aa5.8□□□□□ -1.48
COL6A4P1-202ENST00000487147 ACYP1P07311 99 aa5.8□□□□□ -1.48
COL6A4P1-202ENST00000487147 IGHV3-30-3P0DP02 117 aa5.8□□□□□ -1.48
COL6A4P1-202ENST00000487147 UNQ9165/PRO28630Q6UXU0 137 aa5.8□□□□□ -1.48
COL6A4P1-202ENST00000487147 RAI1Q7Z5J4 1906 aaPredicted RBP5.8□□□□□ -1.48
COL6A4P1-202ENST00000487147 PRR9Q5T870 116 aa5.8□□□□□ -1.48
COL6A4P1-202ENST00000487147 C20orf203Q8NBC4 194 aa5.8□□□□□ -1.48
COL6A4P1-202ENST00000487147 IGHV3-38A0A0C4DH36 116 aa5.8□□□□□ -1.48
COL6A4P1-202ENST00000487147 A0A0J9YXY3 114 aa5.8□□□□□ -1.48
COL6A4P1-202ENST00000487147 LOC107984640A0A0U1RRK4 108 aa5.8□□□□□ -1.48
COL6A4P1-202ENST00000487147 LINC01548A6NM66 108 aa5.8□□□□□ -1.48
COL6A4P1-202ENST00000487147 IGHV1-69P01742 117 aa5.8□□□□□ -1.48
COL6A4P1-202ENST00000487147 TRACP01848 142 aa5.8□□□□□ -1.48
COL6A4P1-202ENST00000487147 P0DMU3 169 aa5.8□□□□□ -1.48
COL6A4P1-202ENST00000487147 FAM231AP0DMU4 169 aa5.8□□□□□ -1.48
COL6A4P1-202ENST00000487147 FAM231CP0DMU5 169 aa5.8□□□□□ -1.48
COL6A4P1-202ENST00000487147 LRRC75A-AS1Q8N1F1 130 aa5.8□□□□□ -1.48
COL6A4P1-202ENST00000487147 F8W735 103 aaPredicted RBP5.79□□□□□ -1.48
COL6A4P1-202ENST00000487147 LINC00158P58513 81 aa5.79□□□□□ -1.48
COL6A4P1-202ENST00000487147 DAND5Q8N907 189 aa5.79□□□□□ -1.48
COL6A4P1-202ENST00000487147 RBMY1BA6NDE4 496 aaKnown RBP5.79□□□□□ -1.48
COL6A4P1-202ENST00000487147 RBMY1EA6NEQ0 496 aaKnown RBP5.79□□□□□ -1.48
COL6A4P1-202ENST00000487147 RBMY1DP0C7P1 496 aaKnown RBP5.79□□□□□ -1.48
COL6A4P1-202ENST00000487147 RBMY1A1P0DJD3 496 aaKnown RBP5.79□□□□□ -1.48
COL6A4P1-202ENST00000487147 RBMY1CP0DJD4 496 aa5.79□□□□□ -1.48
COL6A4P1-202ENST00000487147 HRCT1Q6UXD1 115 aa5.79□□□□□ -1.48
COL6A4P1-202ENST00000487147 C20orf173Q96LM9 149 aa5.79□□□□□ -1.48
COL6A4P1-202ENST00000487147 TRIAP1O43715 76 aa5.79□□□□□ -1.48
COL6A4P1-202ENST00000487147 HIST1H4AP62805 103 aaKnown RBP5.79□□□□□ -1.48
COL6A4P1-202ENST00000487147 CHCHD5Q9BSY4 110 aa5.79□□□□□ -1.48
COL6A4P1-202ENST00000487147 LGALS9O00182 355 aa5.78□□□□□ -1.48
COL6A4P1-202ENST00000487147 BAALC-AS2P0C853 105 aa5.78□□□□□ -1.48
COL6A4P1-202ENST00000487147 ZNF22P17026 224 aaPredicted RBP5.78□□□□□ -1.48
COL6A4P1-202ENST00000487147 ZFP36P26651 326 aaKnown RBP5.78□□□□□ -1.48
COL6A4P1-202ENST00000487147 SMCPP49901 116 aaPredicted RBP5.78□□□□□ -1.48
COL6A4P1-202ENST00000487147 SYNJ2BPP57105 145 aa5.78□□□□□ -1.48
COL6A4P1-202ENST00000487147 PSMG3-AS1Q96PY0 264 aa5.78□□□□□ -1.48
COL6A4P1-202ENST00000487147 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.78□□□□□ -1.48
COL6A4P1-202ENST00000487147 IGHV3-16A0A0C4DH30 117 aa5.78□□□□□ -1.48
COL6A4P1-202ENST00000487147 IGKV2-29A2NJV5 120 aaPredicted RBP5.78□□□□□ -1.48
COL6A4P1-202ENST00000487147 LINC01546A6NGU7 62 aa5.78□□□□□ -1.48
COL6A4P1-202ENST00000487147 TRBV12-3P01733 135 aa5.78□□□□□ -1.48
COL6A4P1-202ENST00000487147 C5orf56Q8N8D9 126 aa5.78□□□□□ -1.48
COL6A4P1-202ENST00000487147 Q9H8V8 135 aa5.78□□□□□ -1.48
COL6A4P1-202ENST00000487147 VCANP13611 3396 aa5.78□□□□□ -1.48
COL6A4P1-202ENST00000487147 TINCRA0A1B0GVN0 87 aa5.78□□□□□ -1.48
COL6A4P1-202ENST00000487147 TMEM223A0PJW6 202 aa5.78□□□□□ -1.48
COL6A4P1-202ENST00000487147 CRIP2P52943 208 aaPredicted RBP5.78□□□□□ -1.48
COL6A4P1-202ENST00000487147 MDFICQ9P1T7 246 aa5.78□□□□□ -1.48
COL6A4P1-202ENST00000487147 TRBV30A0A0K0K1B3 111 aa5.78□□□□□ -1.48
COL6A4P1-202ENST00000487147 HERVK_113P63121 156 aa5.78□□□□□ -1.48
COL6A4P1-202ENST00000487147 RPL36AP83881 106 aaKnown RBP5.78□□□□□ -1.48
COL6A4P1-202ENST00000487147 RPL36ALQ969Q0 106 aaKnown RBP5.78□□□□□ -1.48
COL6A4P1-202ENST00000487147 PTPRQQ9UMZ3 2332 aa5.77□□□□□ -1.49
COL6A4P1-202ENST00000487147 IGHV1-58A0A0C4DH39 117 aa5.77□□□□□ -1.49
COL6A4P1-202ENST00000487147 RS1O15537 224 aa5.77□□□□□ -1.49
COL6A4P1-202ENST00000487147 PAX4O43316 350 aa5.77□□□□□ -1.49
COL6A4P1-202ENST00000487147 DEFB131AP59861 70 aa5.77□□□□□ -1.49
COL6A4P1-202ENST00000487147 ZNRF2Q8NHG8 242 aa5.77□□□□□ -1.49
COL6A4P1-202ENST00000487147 RNASE3P12724 160 aaKnown RBP5.77□□□□□ -1.49
COL6A4P1-202ENST00000487147 POLR2KP53803 58 aaKnown RBP5.77□□□□□ -1.49
COL6A4P1-202ENST00000487147 EBI3Q14213 229 aa5.77□□□□□ -1.49
COL6A4P1-202ENST00000487147 AJUBAQ96IF1 538 aa5.77□□□□□ -1.49
COL6A4P1-202ENST00000487147 OVOL2Q9BRP0 275 aa5.77□□□□□ -1.49
COL6A4P1-202ENST00000487147 PRUNE2Q8WUY3 3088 aa5.77□□□□□ -1.49
COL6A4P1-202ENST00000487147 IGHV4OR15-8A0A075B7B6 117 aa5.77□□□□□ -1.49
COL6A4P1-202ENST00000487147 A0A087WW49 117 aa5.77□□□□□ -1.49
COL6A4P1-202ENST00000487147 OXLD1Q5BKU9 147 aa5.77□□□□□ -1.49
COL6A4P1-202ENST00000487147 CLPSL1A2RUU4 121 aa5.76□□□□□ -1.49
COL6A4P1-202ENST00000487147 IGIPA6NJ69 53 aa5.76□□□□□ -1.49
COL6A4P1-202ENST00000487147 CCL19Q99731 98 aa5.76□□□□□ -1.49
COL6A4P1-202ENST00000487147 LAMA1P25391 3075 aa5.76□□□□□ -1.49
COL6A4P1-202ENST00000487147 TRGV1A0A0A0MS02 117 aa5.76□□□□□ -1.49
COL6A4P1-202ENST00000487147 TRBV27A0A0K0K1C4 114 aa5.76□□□□□ -1.49
COL6A4P1-202ENST00000487147 J3QLI3 93 aa5.76□□□□□ -1.49
COL6A4P1-202ENST00000487147 MIAQ16674 131 aa5.76□□□□□ -1.49
COL6A4P1-202ENST00000487147 CEMP1Q6PRD7 247 aaPredicted RBP5.76□□□□□ -1.49
COL6A4P1-202ENST00000487147 TMEM263Q8WUH6 116 aaKnown RBP5.76□□□□□ -1.49
COL6A4P1-202ENST00000487147 IGLV4-69A0A075B6H9 119 aa5.76□□□□□ -1.49
COL6A4P1-202ENST00000487147 H3BUA1 57 aa5.76□□□□□ -1.49
COL6A4P1-202ENST00000487147 IGHV3-53P01767 116 aa5.76□□□□□ -1.49
COL6A4P1-202ENST00000487147 TSPEAR-AS2P59090 65 aa5.76□□□□□ -1.49
COL6A4P1-202ENST00000487147 SIRPDQ9H106 197 aa5.76□□□□□ -1.49
COL6A4P1-202ENST00000487147 TRGV2A0A075B6R0 118 aa5.75□□□□□ -1.49
COL6A4P1-202ENST00000487147 Q8N6K4 173 aa5.75□□□□□ -1.49
COL6A4P1-202ENST00000487147 IGLV4-3A0A075B6K6 122 aa5.75□□□□□ -1.49
COL6A4P1-202ENST00000487147 WIPF1O43516 503 aa5.75□□□□□ -1.49
COL6A4P1-202ENST00000487147 A0A0U1RQV1 116 aa5.75□□□□□ -1.49
COL6A4P1-202ENST00000487147 NSUN5P1Q3KNT7 163 aa5.75□□□□□ -1.49
COL6A4P1-202ENST00000487147 C1orf195Q5TG92 126 aa5.75□□□□□ -1.49
COL6A4P1-202ENST00000487147 Q6Q795 121 aa5.75□□□□□ -1.49
COL6A4P1-202ENST00000487147 PCSK5Q92824 1860 aa5.75□□□□□ -1.49
COL6A4P1-202ENST00000487147 NDUFA7O95182 113 aa5.75□□□□□ -1.49
COL6A4P1-202ENST00000487147 LINC00643Q86TS7 51 aa5.75□□□□□ -1.49
COL6A4P1-202ENST00000487147 PEMTQ9UBM1 199 aa5.75□□□□□ -1.49
COL6A4P1-202ENST00000487147 BLCAPP62952 87 aa5.74□□□□□ -1.49
COL6A4P1-202ENST00000487147 TRAV13-2A0A0B4J235 113 aa5.74□□□□□ -1.49
COL6A4P1-202ENST00000487147 M0QY20 66 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms