RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 SLAQ13239 276 aa8.92□□□□□ -0.98
HDAC6-229ENST00000486665 RASL11AQ6T310 242 aa8.92□□□□□ -0.98
HDAC6-229ENST00000486665 HERC2O95714 4834 aa8.92□□□□□ -0.98
HDAC6-229ENST00000486665 VPS13DQ5THJ4 4388 aa8.91□□□□□ -0.98
HDAC6-229ENST00000486665 SMKR1H3BMG3 65 aa8.91□□□□□ -0.98
HDAC6-229ENST00000486665 K7EQD1 137 aa8.91□□□□□ -0.98
HDAC6-229ENST00000486665 LINC00476Q8WZB0 136 aa8.91□□□□□ -0.98
HDAC6-229ENST00000486665 GNB1LQ9BYB4 327 aa8.91□□□□□ -0.98
HDAC6-229ENST00000486665 IGLL5B9A064 214 aa8.9□□□□□ -0.98
HDAC6-229ENST00000486665 GAGE12JA6NER3 117 aa8.89□□□□□ -0.99
HDAC6-229ENST00000486665 NCR2O95944 276 aa8.89□□□□□ -0.99
HDAC6-229ENST00000486665 GYPEP15421 78 aa8.89□□□□□ -0.99
HDAC6-229ENST00000486665 GAGE1Q13065 139 aa8.89□□□□□ -0.99
HDAC6-229ENST00000486665 GAGE4Q13068 117 aa8.89□□□□□ -0.99
HDAC6-229ENST00000486665 GAGE5Q13069 117 aa8.89□□□□□ -0.99
HDAC6-229ENST00000486665 RHOHQ15669 191 aa8.89□□□□□ -0.99
HDAC6-229ENST00000486665 KIAA1644Q3SXP7 199 aa8.89□□□□□ -0.99
HDAC6-229ENST00000486665 GAGE13Q4V321 117 aa8.89□□□□□ -0.99
HDAC6-229ENST00000486665 NEXN-AS1Q8NBZ9 246 aa8.89□□□□□ -0.99
HDAC6-229ENST00000486665 RPL39LQ96EH5 51 aaKnown RBP8.89□□□□□ -0.99
HDAC6-229ENST00000486665 PRADC1Q9BSG0 188 aa8.89□□□□□ -0.99
HDAC6-229ENST00000486665 APCSP02743 223 aa8.88□□□□□ -0.99
HDAC6-229ENST00000486665 RPS10P46783 165 aaKnown RBP8.88□□□□□ -0.99
HDAC6-229ENST00000486665 COX19Q49B96 90 aa8.88□□□□□ -0.99
HDAC6-229ENST00000486665 ZNRF2Q8NHG8 242 aa8.88□□□□□ -0.99
HDAC6-229ENST00000486665 MRAP2Q96G30 205 aa8.88□□□□□ -0.99
HDAC6-229ENST00000486665 MRPL18Q9H0U6 180 aaKnown RBP8.88□□□□□ -0.99
HDAC6-229ENST00000486665 A0A096LPF7 62 aa8.87□□□□□ -0.99
HDAC6-229ENST00000486665 TRBV10-1A0A0K0K1A3 114 aa8.87□□□□□ -0.99
HDAC6-229ENST00000486665 NUPR2A6NF83 97 aa8.87□□□□□ -0.99
HDAC6-229ENST00000486665 D6R8Y8 96 aa8.87□□□□□ -0.99
HDAC6-229ENST00000486665 H3BNG1 76 aa8.87□□□□□ -0.99
HDAC6-229ENST00000486665 NUDT3O95989 172 aa8.87□□□□□ -0.99
HDAC6-229ENST00000486665 HLA-DQA1P01909 254 aa8.87□□□□□ -0.99
HDAC6-229ENST00000486665 CKS2P33552 79 aa8.87□□□□□ -0.99
HDAC6-229ENST00000486665 FABP9Q0Z7S8 132 aa8.87□□□□□ -0.99
HDAC6-229ENST00000486665 NRACQ8N912 160 aa8.87□□□□□ -0.99
HDAC6-229ENST00000486665 FRZBQ92765 325 aa8.87□□□□□ -0.99
HDAC6-229ENST00000486665 NIT2Q9NQR4 276 aa8.87□□□□□ -0.99
HDAC6-229ENST00000486665 APLNQ9ULZ1 77 aa8.87□□□□□ -0.99
HDAC6-229ENST00000486665 TRAPPC1Q9Y5R8 145 aa8.87□□□□□ -0.99
HDAC6-229ENST00000486665 H7C1H1 209 aa8.86□□□□□ -0.99
HDAC6-229ENST00000486665 LY6G6CO95867 125 aa8.86□□□□□ -0.99
HDAC6-229ENST00000486665 LINC00694P0DN24 101 aa8.86□□□□□ -0.99
HDAC6-229ENST00000486665 RAB5AP20339 215 aa8.86□□□□□ -0.99
HDAC6-229ENST00000486665 KLK5Q9Y337 293 aaPredicted RBP8.86□□□□□ -0.99
HDAC6-229ENST00000486665 TRBV7-3A0A075B6L6 115 aa8.85□□□□□ -0.99
HDAC6-229ENST00000486665 MT-ND6P03923 174 aa8.85□□□□□ -0.99
HDAC6-229ENST00000486665 UBE2D3P61077 147 aa8.85□□□□□ -0.99
HDAC6-229ENST00000486665 UBE2D2P62837 147 aa8.85□□□□□ -0.99
HDAC6-229ENST00000486665 RPL36AP83881 106 aaKnown RBP8.85□□□□□ -0.99
HDAC6-229ENST00000486665 MRPL23Q16540 153 aaKnown RBP8.85□□□□□ -0.99
HDAC6-229ENST00000486665 OR10J3Q5JRS4 329 aa8.85□□□□□ -0.99
HDAC6-229ENST00000486665 ORMDL3Q8N138 153 aa8.85□□□□□ -0.99
HDAC6-229ENST00000486665 RPL36ALQ969Q0 106 aaKnown RBP8.85□□□□□ -0.99
HDAC6-229ENST00000486665 DNAJC30Q96LL9 226 aa8.85□□□□□ -0.99
HDAC6-229ENST00000486665 TNFRSF18Q9Y5U5 241 aa8.85□□□□□ -0.99
HDAC6-229ENST00000486665 ICOSQ9Y6W8 199 aa8.85□□□□□ -0.99
HDAC6-229ENST00000486665 DNAH6Q9C0G6 4158 aa8.84□□□□□ -0.99
HDAC6-229ENST00000486665 TRBV6-5A0A0K0K1A5 114 aa8.84□□□□□ -0.99
HDAC6-229ENST00000486665 TNFRSF6BO95407 300 aa8.84□□□□□ -0.99
HDAC6-229ENST00000486665 NPYP01303 97 aa8.84□□□□□ -0.99
HDAC6-229ENST00000486665 PPBPP02775 128 aa8.84□□□□□ -0.99
HDAC6-229ENST00000486665 C15orf53Q8NAA6 179 aa8.84□□□□□ -0.99
HDAC6-229ENST00000486665 PRELID3AQ96N28 172 aa8.84□□□□□ -0.99
HDAC6-229ENST00000486665 IGHV3-38A0A0C4DH36 116 aa8.83□□□□□ -1
HDAC6-229ENST00000486665 TRGC2P03986 189 aa8.83□□□□□ -1
HDAC6-229ENST00000486665 SRIP30626 198 aa8.83□□□□□ -1
HDAC6-229ENST00000486665 DEFB104AQ8WTQ1 72 aa8.83□□□□□ -1
HDAC6-229ENST00000486665 ALKBH7Q9BT30 221 aaPredicted RBP8.83□□□□□ -1
HDAC6-229ENST00000486665 ST20Q9HBF5 79 aa8.83□□□□□ -1
HDAC6-229ENST00000486665 PHOX2AO14813 284 aa8.82□□□□□ -1
HDAC6-229ENST00000486665 POLR2KP53803 58 aaKnown RBP8.82□□□□□ -1
HDAC6-229ENST00000486665 ESRGQ1W209 222 aa8.82□□□□□ -1
HDAC6-229ENST00000486665 LYPD5Q6UWN5 251 aa8.82□□□□□ -1
HDAC6-229ENST00000486665 NEGR1Q7Z3B1 354 aa8.82□□□□□ -1
HDAC6-229ENST00000486665 ATP6V0E2Q8NHE4 81 aa8.82□□□□□ -1
HDAC6-229ENST00000486665 SDHAF1A6NFY7 115 aa8.81□□□□□ -1
HDAC6-229ENST00000486665 PPP1R17O96001 155 aa8.81□□□□□ -1
HDAC6-229ENST00000486665 SUMO2P61956 95 aaKnown RBP8.81□□□□□ -1
HDAC6-229ENST00000486665 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.81□□□□□ -1
HDAC6-229ENST00000486665 TMEM70Q9BUB7 260 aa8.81□□□□□ -1
HDAC6-229ENST00000486665 LOC389332A0A1B0GUA5 103 aa8.8□□□□□ -1
HDAC6-229ENST00000486665 TCTAP57738 103 aa8.8□□□□□ -1
HDAC6-229ENST00000486665 SH2D6Q7Z4S9 175 aa8.8□□□□□ -1
HDAC6-229ENST00000486665 C20orf78Q9BR46 151 aa8.8□□□□□ -1
HDAC6-229ENST00000486665 GTSF1LQ9H1H1 148 aa8.8□□□□□ -1
HDAC6-229ENST00000486665 LAMTOR2Q9Y2Q5 125 aa8.8□□□□□ -1
HDAC6-229ENST00000486665 PCLOQ9Y6V0 5065 aa8.8□□□□□ -1
HDAC6-229ENST00000486665 PRSS47A8MTI9 375 aa8.79□□□□□ -1
HDAC6-229ENST00000486665 VCYO14598 125 aa8.79□□□□□ -1
HDAC6-229ENST00000486665 PMCHP20382 165 aa8.79□□□□□ -1
HDAC6-229ENST00000486665 NTM-AS1Q6ZSK4 140 aa8.79□□□□□ -1
HDAC6-229ENST00000486665 DAZ4Q86SG3 579 aaKnown RBP8.79□□□□□ -1
HDAC6-229ENST00000486665 DAZ3Q9NR90 486 aaKnown RBP8.79□□□□□ -1
HDAC6-229ENST00000486665 KIAA1109Q2LD37 5005 aa8.79□□□□□ -1
HDAC6-229ENST00000486665 IGLV2-18A0A075B6J9 118 aa8.78□□□□□ -1
HDAC6-229ENST00000486665 TRBV27A0A0K0K1C4 114 aa8.78□□□□□ -1
HDAC6-229ENST00000486665 I3L3M4 83 aa8.78□□□□□ -1
HDAC6-229ENST00000486665 RPL32P62910 135 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 171.9 ms